RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 C10orf91Q5T1B1 145 aa9.06□□□□□ -0.96
SH2D3A-208ENST00000599563 IBA57Q5T440 356 aaKnown RBP9.06□□□□□ -0.96
SH2D3A-208ENST00000599563 C15orf53Q8NAA6 179 aa9.06□□□□□ -0.96
SH2D3A-208ENST00000599563 SEC11CQ9BY50 192 aa9.06□□□□□ -0.96
SH2D3A-208ENST00000599563 TIMM8BQ9Y5J9 83 aaPredicted RBP9.06□□□□□ -0.96
SH2D3A-208ENST00000599563 TRGV11A0A075B6L2 103 aa9.05□□□□□ -0.96
SH2D3A-208ENST00000599563 H3BVH4 76 aa9.05□□□□□ -0.96
SH2D3A-208ENST00000599563 P01737 135 aa9.05□□□□□ -0.96
SH2D3A-208ENST00000599563 RNF212Q495C1 297 aa9.05□□□□□ -0.96
SH2D3A-208ENST00000599563 FAM231DQ6ZW35 169 aa9.05□□□□□ -0.96
SH2D3A-208ENST00000599563 UBE2DNLQ8IWF7 75 aa9.05□□□□□ -0.96
SH2D3A-208ENST00000599563 OR2D3Q8NGH3 330 aa9.05□□□□□ -0.96
SH2D3A-208ENST00000599563 KCNS1Q96KK3 526 aa9.05□□□□□ -0.96
SH2D3A-208ENST00000599563 KMT2AQ03164 3969 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 GATCO43716 136 aaKnown RBP9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 ATP5G1P05496 136 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 TCL1AP56279 114 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 ERVFC1-1P60608 527 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 DAZAP1Q96EP5 407 aaKnown RBP9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 C9orf85Q96MD7 179 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 RPP21Q9H633 154 aaKnown RBP9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 BIN3Q9NQY0 253 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 OSTCQ9NRP0 149 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 CARHSP1Q9Y2V2 147 aaKnown RBP9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 V9GYV3 84 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 VPS13DQ5THJ4 4388 aa9.04□□□□□ -0.96
SH2D3A-208ENST00000599563 ASIPP42127 132 aa9.03□□□□□ -0.96
SH2D3A-208ENST00000599563 FAM3BP58499 235 aaPredicted RBP9.03□□□□□ -0.96
SH2D3A-208ENST00000599563 NDUFA5Q16718 116 aa9.03□□□□□ -0.96
SH2D3A-208ENST00000599563 TMEM88Q6PEY1 159 aa9.03□□□□□ -0.96
SH2D3A-208ENST00000599563 SFRP2Q96HF1 295 aa9.03□□□□□ -0.96
SH2D3A-208ENST00000599563 NOP10Q9NPE3 64 aaKnown RBP9.03□□□□□ -0.96
SH2D3A-208ENST00000599563 SNURFLB1AK76 121 aa9.02□□□□□ -0.97
SH2D3A-208ENST00000599563 IGLC6P0CF74 106 aa9.02□□□□□ -0.97
SH2D3A-208ENST00000599563 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
SH2D3A-208ENST00000599563 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
SH2D3A-208ENST00000599563 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.97
SH2D3A-208ENST00000599563 OR10G8Q8NGN5 311 aa9.02□□□□□ -0.97
SH2D3A-208ENST00000599563 MRPL16Q9NX20 251 aaKnown RBP9.02□□□□□ -0.97
SH2D3A-208ENST00000599563 MUC21A0A0G2JKD1 596 aa9.01□□□□□ -0.97
SH2D3A-208ENST00000599563 MUC21A0A140T8X8 626 aa9.01□□□□□ -0.97
SH2D3A-208ENST00000599563 CXCL1P09341 107 aa9.01□□□□□ -0.97
SH2D3A-208ENST00000599563 ARMS2P0C7Q2 107 aa9.01□□□□□ -0.97
SH2D3A-208ENST00000599563 Q6ZTI0 123 aa9.01□□□□□ -0.97
SH2D3A-208ENST00000599563 GTSF1Q8WW33 167 aa9.01□□□□□ -0.97
SH2D3A-208ENST00000599563 DNAH6Q9C0G6 4158 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 F5H768 121 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 SNAI2O43623 268 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 SPINK4O60575 86 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 APOC3P02656 99 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 S100A4P26447 101 aaKnown RBP9□□□□□ -0.97
SH2D3A-208ENST00000599563 LGALS9BQ3B8N2 356 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 C15orf54Q8N8G6 183 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 IL36BQ9NZH7 164 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 BIRC6Q9NR09 4857 aa9□□□□□ -0.97
SH2D3A-208ENST00000599563 TRGV1A0A0A0MS02 117 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 GAGE12BA1L429 117 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 GAGE7O76087 117 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 GAGE12FP0CL80 117 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 GAGE12GP0CL81 117 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 GAGE12IP0CL82 117 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 RPS20P60866 119 aaKnown RBP8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 DAZ2Q13117 558 aaKnown RBP8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 CT83Q5H943 113 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 LINC00612Q8N6U2 182 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 FER1L6-AS1Q8NA97 138 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 CLRN3Q8NCR9 226 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 SCRT2Q9NQ03 307 aa8.99□□□□□ -0.97
SH2D3A-208ENST00000599563 MED14OSP0DP75 135 aa8.98□□□□□ -0.97
SH2D3A-208ENST00000599563 SSTP61278 116 aa8.98□□□□□ -0.97
SH2D3A-208ENST00000599563 LYZL1Q6UWQ5 148 aa8.98□□□□□ -0.97
SH2D3A-208ENST00000599563 SPXQ9BT56 116 aa8.98□□□□□ -0.97
SH2D3A-208ENST00000599563 TPPP3Q9BW30 176 aa8.98□□□□□ -0.97
SH2D3A-208ENST00000599563 SSBP4Q9BWG4 385 aaPredicted RBP8.98□□□□□ -0.97
SH2D3A-208ENST00000599563 JPT2Q9H910 190 aa8.98□□□□□ -0.97
SH2D3A-208ENST00000599563 C7orf77A4D0Y5 90 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 A8MWL6 223 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 M0R2P5 195 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 M0R381 172 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 OR5AL1P0C617 328 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 CTRLP40313 264 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 CCL18P55774 89 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 DMRTA1Q5VZB9 504 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 ATRAIDQ6UW56 229 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 TSKUQ8WUA8 353 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 PGLYRP4Q96LB8 373 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 DNAH10Q8IVF4 4471 aa8.97□□□□□ -0.97
SH2D3A-208ENST00000599563 XKRY2A2RUG3 117 aa8.96□□□□□ -0.98
SH2D3A-208ENST00000599563 HIGD1CA8MV81 97 aa8.96□□□□□ -0.98
SH2D3A-208ENST00000599563 NUDT3O95989 172 aa8.96□□□□□ -0.98
SH2D3A-208ENST00000599563 ANAPC16Q96DE5 110 aa8.96□□□□□ -0.98
SH2D3A-208ENST00000599563 MSRB1Q9NZV6 116 aa8.96□□□□□ -0.98
SH2D3A-208ENST00000599563 PHLDA3Q9Y5J5 127 aa8.96□□□□□ -0.98
SH2D3A-208ENST00000599563 FRAS1Q86XX4 4008 aa8.96□□□□□ -0.98
SH2D3A-208ENST00000599563 SMIM27A0A1W2PRY6 76 aa8.95□□□□□ -0.98
SH2D3A-208ENST00000599563 H3BNG1 76 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms