RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 PCNX2A6NKB5 2137 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 PDCD11Q14690 1871 aaKnown RBP3.35□□□□□ -1.87
PAF1-208ENST00000598594 CFAP74Q9C0B2 1584 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 MADDQ8WXG6 1647 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 A0A1W2PPM0 123 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 HMSDA8MTL9 139 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 WISP3O95389 354 aaPredicted RBP3.35□□□□□ -1.87
PAF1-208ENST00000598594 GNG11P61952 73 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 ZNF816Q0VGE8 651 aaPredicted RBP3.35□□□□□ -1.87
PAF1-208ENST00000598594 ZNF345Q14585 488 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 Q1T7F1 81 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 TMEM136Q6ZRR5 245 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 ARPINQ7Z6K5 226 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 Q8NAQ8 132 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 UBALD1Q8TB05 177 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 MYOZ3Q8TDC0 251 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 CYTL1Q9NRR1 136 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 MRPL35Q9NZE8 188 aaKnown RBP3.35□□□□□ -1.87
PAF1-208ENST00000598594 MICAL3Q7RTP6 2002 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 LAMB4A4D0S4 1761 aa3.35□□□□□ -1.87
PAF1-208ENST00000598594 PREX2Q70Z35 1606 aa3.34□□□□□ -1.87
PAF1-208ENST00000598594 C16orf90A8MZG2 172 aa3.34□□□□□ -1.87
PAF1-208ENST00000598594 UBE2G1P62253 170 aa3.34□□□□□ -1.87
PAF1-208ENST00000598594 BVES-AS1Q5T3Y7 98 aa3.34□□□□□ -1.87
PAF1-208ENST00000598594 RPL7L1Q6DKI1 246 aaKnown RBP3.34□□□□□ -1.87
PAF1-208ENST00000598594 ST20-AS1Q8NBB2 130 aa3.34□□□□□ -1.87
PAF1-208ENST00000598594 C20orf166-AS1Q96NR2 134 aa3.34□□□□□ -1.87
PAF1-208ENST00000598594 LINC00474Q9P2X8 69 aa3.34□□□□□ -1.87
PAF1-208ENST00000598594 CACFD1Q9UGQ2 172 aa3.34□□□□□ -1.87
PAF1-208ENST00000598594 ABCA7Q8IZY2 2146 aa3.34□□□□□ -1.88
PAF1-208ENST00000598594 ABCA9Q8IUA7 1624 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 STRCP1A6NGW2 1772 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 A0A1B0GU33 70 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 NAP1L6A6NFF2 107 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 ZNF861PO60384 105 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 RNASE2P10153 161 aaKnown RBP3.33□□□□□ -1.88
PAF1-208ENST00000598594 PRB4P10163 310 aaPredicted RBP3.33□□□□□ -1.88
PAF1-208ENST00000598594 EIF4EBP1Q13541 118 aaPredicted RBP3.33□□□□□ -1.88
PAF1-208ENST00000598594 HMGN3Q15651 99 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 KRTAP24-1Q3LI83 254 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 ETDBQ3ZM63 59 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 SPANXN5Q5MJ07 72 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 HEPN1Q6WQI6 88 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 LYPD6Q86Y78 171 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 KLF14Q8TD94 323 aaPredicted RBP3.33□□□□□ -1.88
PAF1-208ENST00000598594 COL1A2P08123 1366 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 NCOA2Q15596 1464 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 ABCC2Q92887 1545 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 TARBP1Q13395 1621 aaKnown RBP3.33□□□□□ -1.88
PAF1-208ENST00000598594 LAMB2P55268 1798 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 PCSK5Q92824 1860 aa3.33□□□□□ -1.88
PAF1-208ENST00000598594 SDK2Q58EX2 2172 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 TRAV17A0A0B4J275 112 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 CRYM-AS1A6NIL9 109 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 A6NIN4 97 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 DSCR4P56555 118 aaPredicted RBP3.32□□□□□ -1.88
PAF1-208ENST00000598594 SLC48A1Q6P1K1 146 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 ZNF826PQ6ZT77 177 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 OR8B2Q96RD0 313 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 TRGV9Q99603 122 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 LMTK2Q8IWU2 1503 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 DLG5Q8TDM6 1919 aa3.32□□□□□ -1.88
PAF1-208ENST00000598594 DIDO1Q9BTC0 2240 aaKnown RBP3.32□□□□□ -1.88
PAF1-208ENST00000598594 MED12LQ86YW9 2145 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 LTBP2Q14767 1821 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 ITSN1Q15811 1721 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 SETBP1Q9Y6X0 1596 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 PTPRMP28827 1452 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 CDK12Q9NYV4 1490 aaPredicted RBP3.31□□□□□ -1.88
PAF1-208ENST00000598594 MLH3Q9UHC1 1453 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 EDC4Q6P2E9 1401 aaKnown RBP3.31□□□□□ -1.88
PAF1-208ENST00000598594 E7EUB6 86 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 CCL16O15467 120 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 BAALC-AS2P0C853 105 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 SPATA45Q537H7 98 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 ZCCHC23Q6ZST2 131 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 SPTSSBQ8NFR3 76 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 TMEM254Q8TBM7 123 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 NDUFB11Q9NX14 153 aa3.31□□□□□ -1.88
PAF1-208ENST00000598594 ATP10BO94823 1461 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 A0A087WSZ3 146 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 TRAV2A0A0B4J234 112 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 SYS1-DBNDD2H3BUS1 97 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 WFDC2Q14508 124 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 NMSQ5H8A3 153 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 C9orf106Q8NAJ2 232 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 CMTM2Q8TAZ6 248 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
PAF1-208ENST00000598594 LAMA4Q16363 1823 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 RGPD1P0DJD0 1748 aa3.3□□□□□ -1.88
PAF1-208ENST00000598594 CUX1P39880 1505 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 IGLV4-69A0A075B6H9 119 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 IGLV10-54A0A075B6I4 117 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 IGHV3-64A0A075B6Q5 118 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 H3BUT2 72 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 CISD3P0C7P0 127 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 C9orf116Q5BN46 136 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms