RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 S100A9P06702 114 aaKnown RBP11.44□□□□□ -0.58
USHBP1-208ENST00000598309 ASIPP42127 132 aa11.44□□□□□ -0.58
USHBP1-208ENST00000598309 RAB5CP51148 216 aa11.44□□□□□ -0.58
USHBP1-208ENST00000598309 ZNF506Q5JVG8 444 aa11.44□□□□□ -0.58
USHBP1-208ENST00000598309 FAM162BQ5T6X4 162 aa11.44□□□□□ -0.58
USHBP1-208ENST00000598309 CFAP126Q5VTH2 177 aa11.44□□□□□ -0.58
USHBP1-208ENST00000598309 LYPD5Q6UWN5 251 aa11.44□□□□□ -0.58
USHBP1-208ENST00000598309 SH2D6Q7Z4S9 175 aa11.44□□□□□ -0.58
USHBP1-208ENST00000598309 SIVA1O15304 175 aa11.43□□□□□ -0.58
USHBP1-208ENST00000598309 SH2D1AO60880 128 aa11.43□□□□□ -0.58
USHBP1-208ENST00000598309 C1QBP02746 253 aa11.43□□□□□ -0.58
USHBP1-208ENST00000598309 S100A4P26447 101 aaKnown RBP11.43□□□□□ -0.58
USHBP1-208ENST00000598309 CRIP1P50238 77 aa11.43□□□□□ -0.58
USHBP1-208ENST00000598309 DNLZQ5SXM8 178 aa11.43□□□□□ -0.58
USHBP1-208ENST00000598309 IL36BQ9NZH7 164 aa11.43□□□□□ -0.58
USHBP1-208ENST00000598309 TRAV1-1A0A0B4J248 108 aa11.42□□□□□ -0.58
USHBP1-208ENST00000598309 A0A1B0GV50 99 aa11.42□□□□□ -0.58
USHBP1-208ENST00000598309 PGPEP1LA6NFU8 196 aa11.42□□□□□ -0.58
USHBP1-208ENST00000598309 B4DEV8 164 aa11.42□□□□□ -0.58
USHBP1-208ENST00000598309 ZNF674Q2M3X9 581 aa11.42□□□□□ -0.58
USHBP1-208ENST00000598309 TRBV6-4A0A1B0GX49 114 aa11.41□□□□□ -0.58
USHBP1-208ENST00000598309 KRBOX1C9JBD0 128 aa11.41□□□□□ -0.58
USHBP1-208ENST00000598309 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
USHBP1-208ENST00000598309 MANBALQ9NQG1 85 aa11.41□□□□□ -0.58
USHBP1-208ENST00000598309 SCO2A0A1W2PP80 73 aa11.4□□□□□ -0.58
USHBP1-208ENST00000598309 A8MWV9 139 aa11.4□□□□□ -0.58
USHBP1-208ENST00000598309 TIRAPP58753 221 aa11.4□□□□□ -0.58
USHBP1-208ENST00000598309 TNP2Q05952 138 aa11.4□□□□□ -0.58
USHBP1-208ENST00000598309 RHOHQ15669 191 aa11.4□□□□□ -0.58
USHBP1-208ENST00000598309 ZFP2Q6ZN57 461 aa11.4□□□□□ -0.58
USHBP1-208ENST00000598309 SLC25A29Q8N8R3 303 aa11.4□□□□□ -0.58
USHBP1-208ENST00000598309 PRADC1Q9BSG0 188 aa11.4□□□□□ -0.58
USHBP1-208ENST00000598309 LOC100131303A0A0U1RQF7 123 aa11.39□□□□□ -0.59
USHBP1-208ENST00000598309 TEX46H3BTG2 121 aa11.39□□□□□ -0.59
USHBP1-208ENST00000598309 H3BVH4 76 aa11.39□□□□□ -0.59
USHBP1-208ENST00000598309 M0R036 132 aa11.39□□□□□ -0.59
USHBP1-208ENST00000598309 MGST1P10620 155 aaKnown RBP11.39□□□□□ -0.59
USHBP1-208ENST00000598309 SULT1A2P50226 295 aa11.39□□□□□ -0.59
USHBP1-208ENST00000598309 SLC51BQ86UW2 128 aa11.39□□□□□ -0.59
USHBP1-208ENST00000598309 K7EP13 123 aa11.38□□□□□ -0.59
USHBP1-208ENST00000598309 AKAP14Q86UN6 197 aa11.38□□□□□ -0.59
USHBP1-208ENST00000598309 NHLRC2Q8NBF2 726 aa11.38□□□□□ -0.59
USHBP1-208ENST00000598309 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
USHBP1-208ENST00000598309 PARLQ9H300 379 aa11.38□□□□□ -0.59
USHBP1-208ENST00000598309 SCRT2Q9NQ03 307 aa11.38□□□□□ -0.59
USHBP1-208ENST00000598309 IGHV3-73A0A0B4J1V6 119 aa11.37□□□□□ -0.59
USHBP1-208ENST00000598309 ARMS2P0C7Q2 107 aa11.37□□□□□ -0.59
USHBP1-208ENST00000598309 LINC00315P59091 139 aa11.37□□□□□ -0.59
USHBP1-208ENST00000598309 C11orf52Q96A22 123 aa11.37□□□□□ -0.59
USHBP1-208ENST00000598309 MLST8Q9BVC4 326 aa11.37□□□□□ -0.59
USHBP1-208ENST00000598309 GNG13Q9P2W3 67 aa11.37□□□□□ -0.59
USHBP1-208ENST00000598309 PKHD1P08F94 4074 aa11.37□□□□□ -0.59
USHBP1-208ENST00000598309 TRAV9-2A0A087WT02 112 aa11.36□□□□□ -0.59
USHBP1-208ENST00000598309 CXCL1P09341 107 aa11.36□□□□□ -0.59
USHBP1-208ENST00000598309 CCL20P78556 96 aa11.36□□□□□ -0.59
USHBP1-208ENST00000598309 BAGE2Q86Y30 109 aa11.36□□□□□ -0.59
USHBP1-208ENST00000598309 LY96Q9Y6Y9 160 aa11.36□□□□□ -0.59
USHBP1-208ENST00000598309 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
USHBP1-208ENST00000598309 GRIFINA4D1Z8 144 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 RHODO00212 210 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 DNAH10OSP0CZ25 163 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 MED14OSP0DP75 135 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 UFSP1Q6NVU6 142 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 WFDC10BQ8IUB3 73 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 PHLDA3Q9Y5J5 127 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 PKD1P98161 4303 aa11.35□□□□□ -0.59
USHBP1-208ENST00000598309 TMSB15BA0A087X1C1 80 aa11.34□□□□□ -0.59
USHBP1-208ENST00000598309 RPL35P42766 123 aaKnown RBP11.34□□□□□ -0.59
USHBP1-208ENST00000598309 Q6ZRN7 208 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-208ENST00000598309 C9orf62Q8N4C0 152 aa11.34□□□□□ -0.59
USHBP1-208ENST00000598309 IFNA1P01562 189 aa11.33□□□□□ -0.6
USHBP1-208ENST00000598309 EVI2AP22794 236 aa11.33□□□□□ -0.6
USHBP1-208ENST00000598309 ZFP82Q8N141 532 aa11.33□□□□□ -0.6
USHBP1-208ENST00000598309 hCG_2014768A0A024R1R8 64 aa11.32□□□□□ -0.6
USHBP1-208ENST00000598309 LINC00694P0DN24 101 aa11.32□□□□□ -0.6
USHBP1-208ENST00000598309 MEF2BQ02080 365 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-208ENST00000598309 Q6ZSN1 163 aa11.32□□□□□ -0.6
USHBP1-208ENST00000598309 NFE4Q86UQ8 179 aa11.32□□□□□ -0.6
USHBP1-208ENST00000598309 C10orf126Q8N4M7 172 aa11.32□□□□□ -0.6
USHBP1-208ENST00000598309 SFRP2Q96HF1 295 aa11.32□□□□□ -0.6
USHBP1-208ENST00000598309 SAMD10Q9BYL1 202 aa11.32□□□□□ -0.6
USHBP1-208ENST00000598309 JPT2Q9H910 190 aa11.32□□□□□ -0.6
USHBP1-208ENST00000598309 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
USHBP1-208ENST00000598309 HERC2O95714 4834 aa11.31□□□□□ -0.6
USHBP1-208ENST00000598309 TRAV8-6A0A0B4J262 113 aa11.31□□□□□ -0.6
USHBP1-208ENST00000598309 PDE6DO43924 150 aa11.31□□□□□ -0.6
USHBP1-208ENST00000598309 BCL2P10415 239 aa11.31□□□□□ -0.6
USHBP1-208ENST00000598309 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
USHBP1-208ENST00000598309 ATP6V0E2Q8NHE4 81 aa11.31□□□□□ -0.6
USHBP1-208ENST00000598309 SMIM12Q96EX1 92 aa11.31□□□□□ -0.6
USHBP1-208ENST00000598309 DERL1Q9BUN8 251 aa11.31□□□□□ -0.6
USHBP1-208ENST00000598309 GTSF1LQ9H1H1 148 aa11.31□□□□□ -0.6
USHBP1-208ENST00000598309 IGHV3-38A0A0C4DH36 116 aa11.3□□□□□ -0.6
USHBP1-208ENST00000598309 M0R381 172 aa11.3□□□□□ -0.6
USHBP1-208ENST00000598309 CRYGDP07320 174 aa11.3□□□□□ -0.6
USHBP1-208ENST00000598309 RPL19P84098 196 aaKnown RBP11.3□□□□□ -0.6
USHBP1-208ENST00000598309 CENPWQ5EE01 88 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms