RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	DEFA1	P59665	94 aa		7.01	□□□□□ -1.29
LSM4-205	ENST00000597776	DEFA3	P59666	94 aa		7.01	□□□□□ -1.29
LSM4-205	ENST00000597776	ATP6V0E2	Q8NHE4	81 aa		7.01	□□□□□ -1.29
LSM4-205	ENST00000597776	GTSF1L	Q9H1H1	148 aa		7.01	□□□□□ -1.29
LSM4-205	ENST00000597776		A6NHS1	94 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776		K7EQM0	130 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776	LECT2	O14960	151 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776	MGST1	P10620	155 aa	Known RBP	7	□□□□□ -1.29
LSM4-205	ENST00000597776	ATP6V0C	P27449	155 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776	SUMO1	P63165	101 aa	Known RBP	7	□□□□□ -1.29
LSM4-205	ENST00000597776	FLI1	Q01543	452 aa	Predicted RBP	7	□□□□□ -1.29
LSM4-205	ENST00000597776	SMUG1	Q53HV7	270 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776	OR2G3	Q8NGZ4	309 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776	SUN5	Q8TC36	379 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776	SH3BGRL3	Q9H299	93 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776		Q9UF83	564 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776	EPDR1	Q9UM22	224 aa		7	□□□□□ -1.29
LSM4-205	ENST00000597776	TRAV34	A0A0B4J273	112 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	GAGE12J	A6NER3	117 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	CIDEA	O60543	219 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	GAGE1	Q13065	139 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	GAGE4	Q13068	117 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	GAGE5	Q13069	117 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	LAGE3	Q14657	143 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	ZFP69	Q49AA0	526 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	GAGE13	Q4V321	117 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	CYB561D1	Q8N8Q1	229 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	PTH2	Q96A98	100 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	LINC00479	Q96M42	142 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	PARL	Q9H300	379 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	ALG5	Q9Y673	324 aa		6.99	□□□□□ -1.29
LSM4-205	ENST00000597776	IGKV3D-20	A0A0C4DH25	116 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	CXorf1	O96002	111 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	LINC00694	P0DN24	101 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	LGALSL	Q3ZCW2	172 aa	Predicted RBP	6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	DAZ4	Q86SG3	579 aa	Known RBP	6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	OR2T35	Q8NGX2	323 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	AQP10	Q96PS8	301 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	PSMG3	Q9BT73	122 aa	Predicted RBP	6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	SAMD10	Q9BYL1	202 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	JPT2	Q9H910	190 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	DAZ3	Q9NR90	486 aa	Known RBP	6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	TMEM167B	Q9NRX6	74 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	BOLA1	Q9Y3E2	137 aa		6.98	□□□□□ -1.29
LSM4-205	ENST00000597776	S100A4	P26447	101 aa	Known RBP	6.97	□□□□□ -1.29
LSM4-205	ENST00000597776		Q5BKY6	102 aa		6.97	□□□□□ -1.29
LSM4-205	ENST00000597776	SAPCD1	Q5SSQ6	148 aa		6.97	□□□□□ -1.29
LSM4-205	ENST00000597776	C14orf178	Q8N769	122 aa	Predicted RBP	6.97	□□□□□ -1.29
LSM4-205	ENST00000597776	TM2D2	Q9BX73	214 aa		6.97	□□□□□ -1.29
LSM4-205	ENST00000597776	ACTR3C	Q9C0K3	210 aa	Predicted RBP	6.97	□□□□□ -1.29
LSM4-205	ENST00000597776	ARL2-SNX15	V9GYD0	113 aa		6.97	□□□□□ -1.29
LSM4-205	ENST00000597776	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	6.96	□□□□□ -1.3
LSM4-205	ENST00000597776		A8MWV9	139 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776		H3BVH4	76 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	MB	P02144	154 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	ASIP	P42127	132 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	UBE2G2	P60604	165 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	SERF2	P84101	59 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	ZNF726P1	Q15940	193 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	LINC01620	Q4KN68	170 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	UFSP1	Q6NVU6	142 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	ZFP2	Q6ZN57	461 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	DNAJC30	Q96LL9	226 aa		6.96	□□□□□ -1.3
LSM4-205	ENST00000597776	TRAV8-3	A0A0A6YYJ7	113 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776		B4DEV8	164 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776		M0R036	132 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776	IFNA7	P01567	189 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776	C1QB	P02746	253 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776	DMRTA1	Q5VZB9	504 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776	RPL7L1	Q6DKI1	246 aa	Known RBP	6.95	□□□□□ -1.3
LSM4-205	ENST00000597776		Q6ZSA8	131 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776		Q86TA4	180 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776	BAALC	Q8WXS3	180 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776	IL36B	Q9NZH7	164 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776	TNFSF18	Q9UNG2	199 aa		6.95	□□□□□ -1.3
LSM4-205	ENST00000597776		A0A1W2PRE2	83 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	GRIFIN	A4D1Z8	144 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	FABP5P3	A8MUU1	101 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776		J3QL48	77 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	PEX7	O00628	323 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	CRIP1	P50238	77 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	FGF8	P55075	233 aa	Predicted RBP	6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	PIK3CD-AS1	Q5SR53	167 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	LINC00528	Q8N1L1	170 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	ZC2HC1A	Q96GY0	325 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	MED28	Q9H204	178 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776	BATF3	Q9NR55	127 aa		6.94	□□□□□ -1.3
LSM4-205	ENST00000597776		A0A087WWC5	75 aa		6.93	□□□□□ -1.3
LSM4-205	ENST00000597776		A0A087WWL8	130 aa		6.93	□□□□□ -1.3
LSM4-205	ENST00000597776	RNF222	A6NCQ9	220 aa		6.93	□□□□□ -1.3
LSM4-205	ENST00000597776	KRBOX1	C9JBD0	128 aa		6.93	□□□□□ -1.3
LSM4-205	ENST00000597776	SH2D1A	O60880	128 aa		6.93	□□□□□ -1.3
LSM4-205	ENST00000597776	ARMS2	P0C7Q2	107 aa		6.93	□□□□□ -1.3
LSM4-205	ENST00000597776	FAM74A4	Q5TZK3	123 aa		6.93	□□□□□ -1.3
LSM4-205	ENST00000597776	IGKV2D-24	A0A075B6R9	120 aa		6.92	□□□□□ -1.3
LSM4-205	ENST00000597776	FXYD6-FXYD2	A0A087WZ82	144 aa		6.92	□□□□□ -1.3
LSM4-205	ENST00000597776	TMSB15B	A0A087X1C1	80 aa		6.92	□□□□□ -1.3
LSM4-205	ENST00000597776	CTXND1	A0A1B0GTU2	59 aa		6.92	□□□□□ -1.3
LSM4-205	ENST00000597776	FAM74A7	A6NL05	159 aa		6.92	□□□□□ -1.3
LSM4-205	ENST00000597776	RHOD	O00212	210 aa		6.92	□□□□□ -1.3

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