RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 FAM231CP0DMU5 169 aa17.38■□□□□ 0.37
SIN3B-209ENST00000596802 RPL13AP40429 203 aaKnown RBP17.38■□□□□ 0.37
SIN3B-209ENST00000596802 TMEM263Q8WUH6 116 aaKnown RBP17.38■□□□□ 0.37
SIN3B-209ENST00000596802 LINC01620Q4KN68 170 aa17.37■□□□□ 0.37
SIN3B-209ENST00000596802 OR10J6PQ8NGY7 276 aa17.37■□□□□ 0.37
SIN3B-209ENST00000596802 IGHV3-66A0A0C4DH42 116 aa17.37■□□□□ 0.37
SIN3B-209ENST00000596802 BSPH1Q075Z2 132 aa17.37■□□□□ 0.37
SIN3B-209ENST00000596802 C14orf178Q8N769 122 aaPredicted RBP17.37■□□□□ 0.37
SIN3B-209ENST00000596802 LINC01600Q96MT4 127 aa17.37■□□□□ 0.37
SIN3B-209ENST00000596802 DPH3P1Q9H4G8 78 aa17.37■□□□□ 0.37
SIN3B-209ENST00000596802 H7C2G1 150 aa17.36■□□□□ 0.37
SIN3B-209ENST00000596802 MEIG1Q5JSS6 88 aa17.36■□□□□ 0.37
SIN3B-209ENST00000596802 PRR9Q5T870 116 aa17.36■□□□□ 0.37
SIN3B-209ENST00000596802 RNASE6Q93091 150 aaKnown RBP17.36■□□□□ 0.37
SIN3B-209ENST00000596802 SPANXA1Q9NS26 97 aa17.36■□□□□ 0.37
SIN3B-209ENST00000596802 MDFICQ9P1T7 246 aa17.36■□□□□ 0.37
SIN3B-209ENST00000596802 SCGB2A1O75556 95 aa17.35■□□□□ 0.37
SIN3B-209ENST00000596802 WNK2Q9Y3S1 2297 aa17.35■□□□□ 0.37
SIN3B-209ENST00000596802 FAM57AQ8TBR7 257 aa17.35■□□□□ 0.37
SIN3B-209ENST00000596802 PMVKQ15126 192 aa17.35■□□□□ 0.37
SIN3B-209ENST00000596802 IGIPA6NJ69 53 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 MGPP08493 103 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 ATXN8Q156A1 80 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 TMEM170BQ5T4T1 132 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 C9orf47Q6ZRZ4 202 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 ARRDC1-AS1Q9H2J1 176 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 ZFAND3Q9H8U3 227 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 A0A0B4J2C4 111 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 J3QQQ9 107 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 TP53TG1Q9Y2A0 90 aa17.34■□□□□ 0.37
SIN3B-209ENST00000596802 IGHV1-69DA0A0B4J2H0 117 aa17.33■□□□□ 0.36
SIN3B-209ENST00000596802 HES1Q14469 280 aa17.33■□□□□ 0.36
SIN3B-209ENST00000596802 HIF1ANQ9NWT6 349 aa17.33■□□□□ 0.36
SIN3B-209ENST00000596802 IGHV3OR16-13A0A075B7E8 117 aa17.33■□□□□ 0.36
SIN3B-209ENST00000596802 IGHV3-74A0A0B4J1X5 117 aa17.33■□□□□ 0.36
SIN3B-209ENST00000596802 TCF15Q12870 199 aa17.33■□□□□ 0.36
SIN3B-209ENST00000596802 ZNRF2Q8NHG8 242 aa17.33■□□□□ 0.36
SIN3B-209ENST00000596802 GPHB5Q86YW7 130 aa17.32■□□□□ 0.36
SIN3B-209ENST00000596802 LGALS9O00182 355 aa17.32■□□□□ 0.36
SIN3B-209ENST00000596802 IGHV4-39P01824 125 aa17.32■□□□□ 0.36
SIN3B-209ENST00000596802 C1orf122Q6ZSJ8 110 aa17.32■□□□□ 0.36
SIN3B-209ENST00000596802 DYNLRB1Q9NP97 96 aa17.32■□□□□ 0.36
SIN3B-209ENST00000596802 TRBV10-2A0A0K0K1G8 114 aa17.31■□□□□ 0.36
SIN3B-209ENST00000596802 H3BMM0 161 aa17.31■□□□□ 0.36
SIN3B-209ENST00000596802 UBE2WQ96B02 151 aa17.31■□□□□ 0.36
SIN3B-209ENST00000596802 TRAV2A0A0B4J234 112 aa17.31■□□□□ 0.36
SIN3B-209ENST00000596802 DPM3Q9P2X0 92 aa17.31■□□□□ 0.36
SIN3B-209ENST00000596802 LGALS3P17931 250 aaKnown RBP17.3■□□□□ 0.36
SIN3B-209ENST00000596802 MRPL53Q96EL3 112 aaKnown RBP17.3■□□□□ 0.36
SIN3B-209ENST00000596802 CLPSL1A2RUU4 121 aa17.3■□□□□ 0.36
SIN3B-209ENST00000596802 IGF1P05019 195 aa17.3■□□□□ 0.36
SIN3B-209ENST00000596802 CLEC3BP05452 202 aa17.3■□□□□ 0.36
SIN3B-209ENST00000596802 ARL3P36405 182 aa17.29■□□□□ 0.36
SIN3B-209ENST00000596802 FOXC1Q12948 553 aa17.29■□□□□ 0.36
SIN3B-209ENST00000596802 DEFB104AQ8WTQ1 72 aa17.29■□□□□ 0.36
SIN3B-209ENST00000596802 ADGRG4Q8IZF6 3080 aa17.29■□□□□ 0.36
SIN3B-209ENST00000596802 RPL39P62891 51 aaKnown RBP17.29■□□□□ 0.36
SIN3B-209ENST00000596802 Q1RN00 199 aa17.29■□□□□ 0.36
SIN3B-209ENST00000596802 POLEQ07864 2286 aa17.29■□□□□ 0.36
SIN3B-209ENST00000596802 J3KRW8 73 aa17.28■□□□□ 0.36
SIN3B-209ENST00000596802 MUSTN1Q8IVN3 82 aa17.28■□□□□ 0.36
SIN3B-209ENST00000596802 LYNX1G3V0Z9 82 aa17.28■□□□□ 0.36
SIN3B-209ENST00000596802 LYNX1P0DP58 116 aa17.28■□□□□ 0.36
SIN3B-209ENST00000596802 PHLDA3Q9Y5J5 127 aa17.28■□□□□ 0.36
SIN3B-209ENST00000596802 S100A4P26447 101 aaKnown RBP17.27■□□□□ 0.36
SIN3B-209ENST00000596802 VPREB3Q9UKI3 123 aa17.27■□□□□ 0.36
SIN3B-209ENST00000596802 IGHV3-49A0A0A0MS15 119 aa17.27■□□□□ 0.35
SIN3B-209ENST00000596802 ZNF876PQ49A33 203 aa17.27■□□□□ 0.35
SIN3B-209ENST00000596802 BEX4Q9NWD9 120 aaPredicted RBP17.27■□□□□ 0.35
SIN3B-209ENST00000596802 PPP1R17O96001 155 aa17.26■□□□□ 0.35
SIN3B-209ENST00000596802 MRPL23Q16540 153 aaKnown RBP17.26■□□□□ 0.35
SIN3B-209ENST00000596802 TMEM141Q96I45 108 aa17.26■□□□□ 0.35
SIN3B-209ENST00000596802 CHCHD5Q9BSY4 110 aa17.26■□□□□ 0.35
SIN3B-209ENST00000596802 TRIAP1O43715 76 aa17.25■□□□□ 0.35
SIN3B-209ENST00000596802 C3orf56Q8N813 242 aa17.25■□□□□ 0.35
SIN3B-209ENST00000596802 LINC01587Q99440 93 aa17.25■□□□□ 0.35
SIN3B-209ENST00000596802 TIMM17AQ99595 171 aa17.25■□□□□ 0.35
SIN3B-209ENST00000596802 C15orf32Q32M92 178 aa17.24■□□□□ 0.35
SIN3B-209ENST00000596802 PPDPFQ9H3Y8 114 aa17.24■□□□□ 0.35
SIN3B-209ENST00000596802 TRBV30A0A0K0K1B3 111 aa17.24■□□□□ 0.35
SIN3B-209ENST00000596802 C2orf82Q6UX34 121 aa17.24■□□□□ 0.35
SIN3B-209ENST00000596802 CEP250Q9BV73 2442 aa17.23■□□□□ 0.35
SIN3B-209ENST00000596802 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.23■□□□□ 0.35
SIN3B-209ENST00000596802 TMEM126AQ9H061 195 aa17.23■□□□□ 0.35
SIN3B-209ENST00000596802 CACNA1HO95180 2353 aa17.23■□□□□ 0.35
SIN3B-209ENST00000596802 ZFAND2AQ8N6M9 145 aa17.23■□□□□ 0.35
SIN3B-209ENST00000596802 CDX4O14627 284 aaPredicted RBP17.22■□□□□ 0.35
SIN3B-209ENST00000596802 ZNF56Q15929 161 aa17.22■□□□□ 0.35
SIN3B-209ENST00000596802 H7C423 109 aa17.21■□□□□ 0.35
SIN3B-209ENST00000596802 LEPROTO15243 131 aa17.21■□□□□ 0.35
SIN3B-209ENST00000596802 POLR2KP53803 58 aaKnown RBP17.21■□□□□ 0.35
SIN3B-209ENST00000596802 POM121L12Q8N7R1 296 aa17.21■□□□□ 0.35
SIN3B-209ENST00000596802 LENEPQ9Y5L5 61 aa17.21■□□□□ 0.35
SIN3B-209ENST00000596802 ARHGAP32A7KAX9 2087 aa17.21■□□□□ 0.35
SIN3B-209ENST00000596802 E7EQL1 145 aa17.21■□□□□ 0.35
SIN3B-209ENST00000596802 TRAV21A0A0B4J279 112 aa17.2■□□□□ 0.34
SIN3B-209ENST00000596802 DEFB109BQ30KR1 87 aa17.2■□□□□ 0.34
SIN3B-209ENST00000596802 YAE1D1Q9NRH1 226 aa17.2■□□□□ 0.34
SIN3B-209ENST00000596802 IGHV7-81A0A0B4J1V7 117 aa17.2■□□□□ 0.34
SIN3B-209ENST00000596802 TMEM223A0PJW6 202 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms