RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 RS1O15537 224 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 PAX4O43316 350 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 S100A9P06702 114 aaKnown RBP7.7□□□□□ -1.18
VRK3-210ENST00000596121 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 OR4C5Q8NGB2 326 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 PTH2Q96A98 100 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 JPT2Q9H910 190 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 PRO0255Q9UI72 69 aa7.7□□□□□ -1.18
VRK3-210ENST00000596121 TRGV4A0A0C4DH28 118 aa7.69□□□□□ -1.18
VRK3-210ENST00000596121 LOC100131303A0A0U1RQF7 123 aa7.69□□□□□ -1.18
VRK3-210ENST00000596121 BCL2P10415 239 aa7.69□□□□□ -1.18
VRK3-210ENST00000596121 RPL19P84098 196 aaKnown RBP7.69□□□□□ -1.18
VRK3-210ENST00000596121 MEF2BQ02080 365 aaPredicted RBP7.69□□□□□ -1.18
VRK3-210ENST00000596121 Q6ZSN1 163 aa7.69□□□□□ -1.18
VRK3-210ENST00000596121 LYPD6BQ8NI32 183 aa7.69□□□□□ -1.18
VRK3-210ENST00000596121 SCRT2Q9NQ03 307 aa7.69□□□□□ -1.18
VRK3-210ENST00000596121 IL36BQ9NZH7 164 aa7.69□□□□□ -1.18
VRK3-210ENST00000596121 TRBV20OR9-2A0A075B6H5 130 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 TEX46H3BTG2 121 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 H3BVH4 76 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 K7EQD1 137 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 ARMS2P0C7Q2 107 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 GATA1P15976 413 aaPredicted RBP7.68□□□□□ -1.18
VRK3-210ENST00000596121 ASIPP42127 132 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 CCL18P55774 89 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 CENPWQ5EE01 88 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 DMRTA1Q5VZB9 504 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 SAMD10Q9BYL1 202 aa7.68□□□□□ -1.18
VRK3-210ENST00000596121 IGHV3-73A0A0B4J1V6 119 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 RTL8CO15255 209 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 GYPEP15421 78 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 S100A4P26447 101 aaKnown RBP7.67□□□□□ -1.18
VRK3-210ENST00000596121 FAM3BP58499 235 aaPredicted RBP7.67□□□□□ -1.18
VRK3-210ENST00000596121 SLAQ13239 276 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 UFSP1Q6NVU6 142 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 TXNDC17Q9BRA2 123 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 MED9Q9NWA0 146 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 VAX2Q9UIW0 290 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 ICOSQ9Y6W8 199 aa7.67□□□□□ -1.18
VRK3-210ENST00000596121 DNAH11Q96DT5 4516 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 PDE6DO43924 150 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 IFNA1P01562 189 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 BLOC1S1P78537 153 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 PRR27Q6MZM9 219 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 LYPD5Q6UWN5 251 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 SLC25A29Q8N8R3 303 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 PARLQ9H300 379 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 Q9UF83 564 aa7.66□□□□□ -1.18
VRK3-210ENST00000596121 MRPS16Q9Y3D3 137 aaKnown RBP7.66□□□□□ -1.18
VRK3-210ENST00000596121 NBDYA0A0U1RRE5 68 aa7.65□□□□□ -1.18
VRK3-210ENST00000596121 RBFOX3A6NFN3 312 aa7.65□□□□□ -1.18
VRK3-210ENST00000596121 PCNPQ8WW12 178 aaKnown RBP7.65□□□□□ -1.18
VRK3-210ENST00000596121 UPK3BQ9BT76 320 aa7.65□□□□□ -1.18
VRK3-210ENST00000596121 Q9H8V8 135 aa7.65□□□□□ -1.18
VRK3-210ENST00000596121 PKD1P98161 4303 aa7.64□□□□□ -1.19
VRK3-210ENST00000596121 HECTD4Q9Y4D8 3996 aa7.64□□□□□ -1.19
VRK3-210ENST00000596121 DYNC1H1Q14204 4646 aaKnown RBP7.64□□□□□ -1.19
VRK3-210ENST00000596121 MUC21A0A0G2JKD1 596 aa7.64□□□□□ -1.19
VRK3-210ENST00000596121 MUC21A0A140T8X8 626 aa7.64□□□□□ -1.19
VRK3-210ENST00000596121 C19orf71A6NCJ1 209 aa7.64□□□□□ -1.19
VRK3-210ENST00000596121 MRPL23Q16540 153 aaKnown RBP7.64□□□□□ -1.19
VRK3-210ENST00000596121 PIK3CD-AS1Q5SR53 167 aa7.64□□□□□ -1.19
VRK3-210ENST00000596121 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
VRK3-210ENST00000596121 TRBV6-4A0A1B0GX49 114 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 K7EN84 100 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 M0R381 172 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 CRYGDP07320 174 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 GZMBP10144 247 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 MGST1P10620 155 aaKnown RBP7.63□□□□□ -1.19
VRK3-210ENST00000596121 GNG4P50150 75 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 NEGR1Q7Z3B1 354 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 C14orf178Q8N769 122 aaPredicted RBP7.63□□□□□ -1.19
VRK3-210ENST00000596121 OR10AG1Q8NH19 301 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 OCC1Q8TAD7 63 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 SFRP2Q96HF1 295 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 PHLDA3Q9Y5J5 127 aa7.63□□□□□ -1.19
VRK3-210ENST00000596121 A0A087WWL8 130 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 A0A1B0GVY2 172 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 A8MWV9 139 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 SNAI2O43623 268 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 CIDEAO60543 219 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 NXPH4O95158 308 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 CXCL1P09341 107 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 MED14OSP0DP75 135 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 SRIP30626 198 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 TAGLN2P37802 199 aaKnown RBP7.62□□□□□ -1.19
VRK3-210ENST00000596121 ZFP2Q6ZN57 461 aa7.62□□□□□ -1.19
VRK3-210ENST00000596121 LINC00694P0DN24 101 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 TOR2AQ5JU69 321 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 TEX261Q6UWH6 196 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 SYT8Q8NBV8 401 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 NUDT10Q8NFP7 164 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 OR2D3Q8NGH3 330 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 SMIM12Q96EX1 92 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 NUDT11Q96G61 164 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 FAM210AQ96ND0 272 aa7.61□□□□□ -1.19
VRK3-210ENST00000596121 C9JQL5 133 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms