RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 TRAV4A0A0B4J268 109 aa10.06□□□□□ -0.8
LIG1-208ENST00000595758 PEA15Q15121 130 aa10.06□□□□□ -0.8
LIG1-208ENST00000595758 LGALS9CQ6DKI2 356 aa10.06□□□□□ -0.8
LIG1-208ENST00000595758 POM121L12Q8N7R1 296 aa10.06□□□□□ -0.8
LIG1-208ENST00000595758 OCC1Q8TAD7 63 aa10.06□□□□□ -0.8
LIG1-208ENST00000595758 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
LIG1-208ENST00000595758 ALMS1Q8TCU4 4167 aa10.06□□□□□ -0.8
LIG1-208ENST00000595758 TRGV4A0A0C4DH28 118 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 A0A0J9YY99 117 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 C19orf71A6NCJ1 209 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 NUDT3O95989 172 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 CXCL1P09341 107 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 SFTA3P0C7M3 94 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 SLAQ13239 276 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 FHL2Q14192 279 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 SMIM7Q9BQ49 75 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 SCRT2Q9NQ03 307 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 PHLDA3Q9Y5J5 127 aa10.05□□□□□ -0.8
LIG1-208ENST00000595758 ZNF727A8MUV8 499 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 H3BNG1 76 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 RS1O15537 224 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 P01737 135 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 RPS20P60866 119 aaKnown RBP10.04□□□□□ -0.8
LIG1-208ENST00000595758 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 SYT8Q8NBV8 401 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 OR2D3Q8NGH3 330 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 PRO0255Q9UI72 69 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
LIG1-208ENST00000595758 DNAH1Q9P2D7 4330 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 LYSTQ99698 3801 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 C9JQL5 133 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 K7EN84 100 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 PAX4O43316 350 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 P0DMU3 169 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 FAM231AP0DMU4 169 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 FAM231CP0DMU5 169 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 MED14OSP0DP75 135 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 SRSF3P84103 164 aaKnown RBP10.03□□□□□ -0.8
LIG1-208ENST00000595758 IFITM2Q01629 132 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 CFAP126Q5VTH2 177 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 VSIG2Q96IQ7 327 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 LY96Q9Y6Y9 160 aa10.03□□□□□ -0.8
LIG1-208ENST00000595758 A8MWV9 139 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 M0R381 172 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 CIDEAO60543 219 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 CRYBA4P53673 196 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 CLLU1Q5K131 121 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 ZFP82Q8N141 532 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 NUDT10Q8NFP7 164 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 NUDT11Q96G61 164 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 RYR2Q92736 4967 aa10.02□□□□□ -0.81
LIG1-208ENST00000595758 SACSQ9NZJ4 4579 aa10.01□□□□□ -0.81
LIG1-208ENST00000595758 XKRY2A2RUG3 117 aa10.01□□□□□ -0.81
LIG1-208ENST00000595758 GZMBP10144 247 aa10.01□□□□□ -0.81
LIG1-208ENST00000595758 FAM74A3Q4VXF1 159 aa10.01□□□□□ -0.81
LIG1-208ENST00000595758 SSBP4Q9BWG4 385 aaPredicted RBP10.01□□□□□ -0.81
LIG1-208ENST00000595758 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
LIG1-208ENST00000595758 IGHV3-73A0A0B4J1V6 119 aa10□□□□□ -0.81
LIG1-208ENST00000595758 SNAI2O43623 268 aa10□□□□□ -0.81
LIG1-208ENST00000595758 OR5AL1P0C617 328 aa10□□□□□ -0.81
LIG1-208ENST00000595758 GATA1P15976 413 aaPredicted RBP10□□□□□ -0.81
LIG1-208ENST00000595758 TMEM241Q24JQ0 296 aa10□□□□□ -0.81
LIG1-208ENST00000595758 LINC01551Q86U37 167 aa10□□□□□ -0.81
LIG1-208ENST00000595758 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
LIG1-208ENST00000595758 OR10AG1Q8NH19 301 aa10□□□□□ -0.81
LIG1-208ENST00000595758 RPP21Q9H633 154 aaKnown RBP10□□□□□ -0.81
LIG1-208ENST00000595758 JPT2Q9H910 190 aa10□□□□□ -0.81
LIG1-208ENST00000595758 NACAE9PAV3 2078 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 RNF212Q495C1 297 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 SOHLH1Q5JUK2 328 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 FAM231DQ6ZW35 169 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 FER1L6-AS1Q8NA97 138 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 SFRP2Q96HF1 295 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 TPPP3Q9BW30 176 aa9.99□□□□□ -0.81
LIG1-208ENST00000595758 A0A096LPF7 62 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 GATCO43716 136 aaKnown RBP9.98□□□□□ -0.81
LIG1-208ENST00000595758 NXPH4O95158 308 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 ERVFC1-1P60608 527 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 SSTP61278 116 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 SAMD10Q9BYL1 202 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 ICOSQ9Y6W8 199 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 VPS13DQ5THJ4 4388 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 RYR3Q15413 4870 aa9.98□□□□□ -0.81
LIG1-208ENST00000595758 A0A087WWL8 130 aa9.97□□□□□ -0.81
LIG1-208ENST00000595758 A0A1W2PPQ1 181 aa9.97□□□□□ -0.81
LIG1-208ENST00000595758 RHODO00212 210 aa9.97□□□□□ -0.81
LIG1-208ENST00000595758 GYPEP15421 78 aa9.97□□□□□ -0.81
LIG1-208ENST00000595758 CCL18P55774 89 aa9.97□□□□□ -0.81
LIG1-208ENST00000595758 MRPL23Q16540 153 aaKnown RBP9.97□□□□□ -0.81
LIG1-208ENST00000595758 SLC25A29Q8N8R3 303 aa9.97□□□□□ -0.81
LIG1-208ENST00000595758 NAT8Q9UHE5 227 aa9.97□□□□□ -0.81
LIG1-208ENST00000595758 HYDINQ4G0P3 5121 aa9.96□□□□□ -0.81
LIG1-208ENST00000595758 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms