RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 OR10G7Q8NGN6 311 aa12.5□□□□□ -0.41
PDE4C-208ENST00000595343 NTN5Q8WTR8 489 aaPredicted RBP12.5□□□□□ -0.41
PDE4C-208ENST00000595343 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
PDE4C-208ENST00000595343 OR51M1Q9H341 326 aa12.5□□□□□ -0.41
PDE4C-208ENST00000595343 RBFOX3A6NFN3 312 aa12.49□□□□□ -0.41
PDE4C-208ENST00000595343 C9JCJ5 164 aa12.49□□□□□ -0.41
PDE4C-208ENST00000595343 F8W036 122 aa12.49□□□□□ -0.41
PDE4C-208ENST00000595343 J3QL48 77 aa12.49□□□□□ -0.41
PDE4C-208ENST00000595343 SRSF3P84103 164 aaKnown RBP12.49□□□□□ -0.41
PDE4C-208ENST00000595343 TMEM183BQ1AE95 376 aa12.49□□□□□ -0.41
PDE4C-208ENST00000595343 TMEM183AQ8IXX5 376 aa12.49□□□□□ -0.41
PDE4C-208ENST00000595343 SVBPQ8N300 66 aa12.49□□□□□ -0.41
PDE4C-208ENST00000595343 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
PDE4C-208ENST00000595343 APOC3P02656 99 aa12.48□□□□□ -0.41
PDE4C-208ENST00000595343 OR10J4P0C629 311 aa12.48□□□□□ -0.41
PDE4C-208ENST00000595343 PPT1P50897 306 aa12.48□□□□□ -0.41
PDE4C-208ENST00000595343 FXYD5Q96DB9 178 aa12.48□□□□□ -0.41
PDE4C-208ENST00000595343 PAXXQ9BUH6 204 aa12.48□□□□□ -0.41
PDE4C-208ENST00000595343 TRGV11A0A075B6L2 103 aa12.47□□□□□ -0.41
PDE4C-208ENST00000595343 TRAV4A0A0B4J268 109 aa12.47□□□□□ -0.41
PDE4C-208ENST00000595343 IGHV3-38A0A0C4DH36 116 aa12.47□□□□□ -0.41
PDE4C-208ENST00000595343 LOC100131303A0A0U1RQF7 123 aa12.47□□□□□ -0.41
PDE4C-208ENST00000595343 RBAKDNA6NC62 111 aa12.47□□□□□ -0.41
PDE4C-208ENST00000595343 CDC34P49427 236 aaPredicted RBP12.47□□□□□ -0.41
PDE4C-208ENST00000595343 CCL20P78556 96 aa12.47□□□□□ -0.41
PDE4C-208ENST00000595343 Q6AWC8 147 aa12.47□□□□□ -0.41
PDE4C-208ENST00000595343 FAM159AQ6UWV7 190 aa12.47□□□□□ -0.41
PDE4C-208ENST00000595343 SNAPINO95295 136 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 ADCYAP1P18509 176 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 CSN1S1P47710 185 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 TIRAPP58753 221 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 Q8N814 137 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 RAB24Q969Q5 203 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 MANBALQ9NQG1 85 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 FAM30AQ9NZY2 134 aa12.46□□□□□ -0.41
PDE4C-208ENST00000595343 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
PDE4C-208ENST00000595343 IBA57-AS1B1ANH7 110 aa12.45□□□□□ -0.42
PDE4C-208ENST00000595343 BCL2P10415 239 aa12.45□□□□□ -0.42
PDE4C-208ENST00000595343 RANP62826 216 aaKnown RBP12.45□□□□□ -0.42
PDE4C-208ENST00000595343 LINC01556Q5JQF7 62 aa12.45□□□□□ -0.42
PDE4C-208ENST00000595343 NHLRC2Q8NBF2 726 aa12.44□□□□□ -0.42
PDE4C-208ENST00000595343 VAX2Q9UIW0 290 aa12.44□□□□□ -0.42
PDE4C-208ENST00000595343 LENEPQ9Y5L5 61 aa12.44□□□□□ -0.42
PDE4C-208ENST00000595343 C9JQL5 133 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 M0R2P5 195 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 OR7C2O60412 319 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 SRP19P09132 144 aaKnown RBP12.43□□□□□ -0.42
PDE4C-208ENST00000595343 STAG3L2P0CL84 134 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 STAG3L3P0CL85 134 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 TDRG1Q3Y452 100 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 SUN5Q8TC36 379 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 Q9HAA7 133 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 NAGKQ9UJ70 344 aa12.43□□□□□ -0.42
PDE4C-208ENST00000595343 IGHV3-16A0A0C4DH30 117 aa12.42□□□□□ -0.42
PDE4C-208ENST00000595343 A0A1B0GV50 99 aa12.42□□□□□ -0.42
PDE4C-208ENST00000595343 DIRC3C9JPN6 131 aa12.42□□□□□ -0.42
PDE4C-208ENST00000595343 GNRH2O43555 120 aa12.42□□□□□ -0.42
PDE4C-208ENST00000595343 NKX6-2Q9C056 277 aaPredicted RBP12.42□□□□□ -0.42
PDE4C-208ENST00000595343 GNG13Q9P2W3 67 aa12.42□□□□□ -0.42
PDE4C-208ENST00000595343 ARL2-SNX15V9GYD0 113 aa12.42□□□□□ -0.42
PDE4C-208ENST00000595343 TRAV8-6A0A0B4J262 113 aa12.41□□□□□ -0.42
PDE4C-208ENST00000595343 CXorf1O96002 111 aa12.41□□□□□ -0.42
PDE4C-208ENST00000595343 GATA1P15976 413 aaPredicted RBP12.41□□□□□ -0.42
PDE4C-208ENST00000595343 FGF8P55075 233 aaPredicted RBP12.41□□□□□ -0.42
PDE4C-208ENST00000595343 DNAH8Q96JB1 4490 aa12.41□□□□□ -0.42
PDE4C-208ENST00000595343 TMEM250H0YL14 139 aa12.4□□□□□ -0.42
PDE4C-208ENST00000595343 UBE2L3P68036 154 aaKnown RBP12.4□□□□□ -0.42
PDE4C-208ENST00000595343 OR10J3Q5JRS4 329 aa12.4□□□□□ -0.42
PDE4C-208ENST00000595343 IGHV3-30P01768 117 aa12.39□□□□□ -0.43
PDE4C-208ENST00000595343 IGHV3-33P01772 117 aa12.39□□□□□ -0.43
PDE4C-208ENST00000595343 PLA2G1BP04054 148 aaKnown RBP12.39□□□□□ -0.43
PDE4C-208ENST00000595343 PFN1P07737 140 aaKnown RBP12.39□□□□□ -0.43
PDE4C-208ENST00000595343 IGHV3-30-3P0DP02 117 aa12.39□□□□□ -0.43
PDE4C-208ENST00000595343 IGHV3-30-5P0DP03 117 aa12.39□□□□□ -0.43
PDE4C-208ENST00000595343 TAS2R45P59539 299 aa12.39□□□□□ -0.43
PDE4C-208ENST00000595343 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
PDE4C-208ENST00000595343 KRTAP29-1A8MX34 341 aaPredicted RBP12.38□□□□□ -0.43
PDE4C-208ENST00000595343 TYMSP04818 313 aa12.38□□□□□ -0.43
PDE4C-208ENST00000595343 FAM74A3Q4VXF1 159 aa12.38□□□□□ -0.43
PDE4C-208ENST00000595343 PQLC2Q6ZP29 291 aa12.38□□□□□ -0.43
PDE4C-208ENST00000595343 SLC25A29Q8N8R3 303 aa12.38□□□□□ -0.43
PDE4C-208ENST00000595343 CLRN3Q8NCR9 226 aa12.38□□□□□ -0.43
PDE4C-208ENST00000595343 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
PDE4C-208ENST00000595343 Q6ZSA8 131 aa12.37□□□□□ -0.43
PDE4C-208ENST00000595343 TMEM167BQ9NRX6 74 aa12.37□□□□□ -0.43
PDE4C-208ENST00000595343 TRAV21A0A0B4J279 112 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 SCO1O75880 301 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 WFDC2Q14508 124 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 RHEBQ15382 184 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 LELP1Q5T871 98 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 ATRAIDQ6UW56 229 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 CYB561D1Q8N8Q1 229 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 SDF2L1Q9HCN8 221 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 OTORQ9NRC9 128 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 RPH3ALQ9UNE2 315 aa12.36□□□□□ -0.43
PDE4C-208ENST00000595343 F6UZH7 168 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms