RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 FABP5P3A8MUU1 101 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 IGLC6P0CF74 106 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 FABP4P15090 132 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 CTRLP40313 264 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 RAB4BP61018 213 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 HIST1H1AQ02539 215 aaPredicted RBP9.36□□□□□ -0.91
SCAF1-202ENST00000595242 ERCC8Q13216 396 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 PDZD11Q5EBL8 140 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 TMEM18Q96B42 140 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 LINC00477Q96M19 166 aa9.36□□□□□ -0.91
SCAF1-202ENST00000595242 GRIFINA4D1Z8 144 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 GZMBP10144 247 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 TCTAP57738 103 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 RIGQ13278 110 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 PYY3Q5JQD4 70 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 ZNF493Q6ZR52 646 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 APRG1Q8IVJ8 170 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 TMEM256Q8N2U0 113 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 DCANP1Q8TF63 244 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
SCAF1-202ENST00000595242 ARMS2P0C7Q2 107 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 PRB4P10163 310 aaPredicted RBP9.34□□□□□ -0.91
SCAF1-202ENST00000595242 EDN2P20800 178 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 SRIP30626 198 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 CAMPP49913 170 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 APOC4P55056 127 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 PAFAH1B2P68402 229 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 DMRTA1Q5VZB9 504 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 ZNF575Q86XF7 245 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 ZNF738Q8NE65 137 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 ALKBH7Q9BT30 221 aaPredicted RBP9.34□□□□□ -0.91
SCAF1-202ENST00000595242 CNFNQ9BYD5 112 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 SELENOKQ9Y6D0 94 aa9.34□□□□□ -0.91
SCAF1-202ENST00000595242 NUPR1O60356 82 aa9.33□□□□□ -0.92
SCAF1-202ENST00000595242 SERF1AO75920 110 aa9.33□□□□□ -0.92
SCAF1-202ENST00000595242 NANOS2P60321 138 aaKnown RBP9.33□□□□□ -0.92
SCAF1-202ENST00000595242 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
SCAF1-202ENST00000595242 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
SCAF1-202ENST00000595242 BORCS7Q96B45 105 aa9.33□□□□□ -0.92
SCAF1-202ENST00000595242 C2orf70A6NJV1 201 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 RTL8CO15255 209 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 ID1P41134 155 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 JOSD1Q15040 202 aaPredicted RBP9.32□□□□□ -0.92
SCAF1-202ENST00000595242 BAGE3Q86Y29 109 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 OR8A1Q8NGG7 326 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 OR10J6PQ8NGY7 276 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 C11orf45Q8TAV5 145 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 APLNQ9ULZ1 77 aa9.32□□□□□ -0.92
SCAF1-202ENST00000595242 F2Z2F3 143 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 K7EQG2 157 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 S100A12P80511 92 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 LYZL1Q6UWQ5 148 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 ZFAND2AQ8N6M9 145 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 MAPKAPK5-AS1Q8N8E1 139 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 FER1L6-AS1Q8NA97 138 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 KCNS1Q96KK3 526 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 ODF3Q96PU9 254 aa9.31□□□□□ -0.92
SCAF1-202ENST00000595242 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
SCAF1-202ENST00000595242 TRAV2A0A0B4J234 112 aa9.3□□□□□ -0.92
SCAF1-202ENST00000595242 IGKV3D-20A0A0C4DH25 116 aa9.3□□□□□ -0.92
SCAF1-202ENST00000595242 IGLL5B9A064 214 aa9.3□□□□□ -0.92
SCAF1-202ENST00000595242 C11orf21Q9P2W6 132 aa9.3□□□□□ -0.92
SCAF1-202ENST00000595242 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
SCAF1-202ENST00000595242 PRR9Q5T870 116 aa9.29□□□□□ -0.92
SCAF1-202ENST00000595242 MS4A6AQ9H2W1 248 aa9.29□□□□□ -0.92
SCAF1-202ENST00000595242 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
SCAF1-202ENST00000595242 TMSB15BA0A087X1C1 80 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 TRAV21A0A0B4J279 112 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 KIR2DL5BA0A0G2JN68 375 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 KIR2DL5BA0A0G2JPC4 375 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 SNAI2O43623 268 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 ORM1P02763 201 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 GPX1P07203 203 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 KIR2DL5AQ8N109 375 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 KIR2DL5BQ8NHK3 375 aa9.28□□□□□ -0.92
SCAF1-202ENST00000595242 AGRNO00468 2067 aa9.27□□□□□ -0.93
SCAF1-202ENST00000595242 IGHV4-4A0A075B6R2 117 aa9.27□□□□□ -0.93
SCAF1-202ENST00000595242 KLLNB2CW77 178 aa9.27□□□□□ -0.93
SCAF1-202ENST00000595242 ZNF324O75467 553 aaPredicted RBP9.27□□□□□ -0.93
SCAF1-202ENST00000595242 OR5AL1P0C617 328 aa9.27□□□□□ -0.93
SCAF1-202ENST00000595242 IQCJQ1A5X6 159 aa9.27□□□□□ -0.93
SCAF1-202ENST00000595242 FAM104BQ5XKR9 115 aa9.27□□□□□ -0.93
SCAF1-202ENST00000595242 TMEM191AQ9H0A3 160 aa9.27□□□□□ -0.93
SCAF1-202ENST00000595242 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.93
SCAF1-202ENST00000595242 A0A0J9YX75 114 aa9.26□□□□□ -0.93
SCAF1-202ENST00000595242 M0R2N4 97 aa9.26□□□□□ -0.93
SCAF1-202ENST00000595242 ZNF705DP0CH99 300 aaPredicted RBP9.26□□□□□ -0.93
SCAF1-202ENST00000595242 ZNF705BP0CI00 300 aaPredicted RBP9.26□□□□□ -0.93
SCAF1-202ENST00000595242 SNRPD3P62318 126 aaKnown RBP9.26□□□□□ -0.93
SCAF1-202ENST00000595242 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
SCAF1-202ENST00000595242 URB1-AS1Q96HZ7 61 aa9.26□□□□□ -0.93
SCAF1-202ENST00000595242 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
SCAF1-202ENST00000595242 A8MTW9 85 aa9.25□□□□□ -0.93
SCAF1-202ENST00000595242 F6UB75 175 aa9.25□□□□□ -0.93
SCAF1-202ENST00000595242 CDK2AP2O75956 126 aa9.25□□□□□ -0.93
SCAF1-202ENST00000595242 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
SCAF1-202ENST00000595242 CACNG7P62955 275 aa9.25□□□□□ -0.93
SCAF1-202ENST00000595242 CDPF1Q6NVV7 123 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms