RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TMEM75Q8N9X5 138 aa15.95■□□□□ 0.14
LSM4-202ENST00000593564 ATP6V0E2Q8NHE4 81 aa15.95■□□□□ 0.14
LSM4-202ENST00000593564 RAB24Q969Q5 203 aa15.95■□□□□ 0.14
LSM4-202ENST00000593564 PGPEP1LA6NFU8 196 aa15.94■□□□□ 0.14
LSM4-202ENST00000593564 RNASE3P12724 160 aaKnown RBP15.94■□□□□ 0.14
LSM4-202ENST00000593564 ZFP69Q49AA0 526 aa15.94■□□□□ 0.14
LSM4-202ENST00000593564 SMUG1Q53HV7 270 aa15.94■□□□□ 0.14
LSM4-202ENST00000593564 Q6ZSN1 163 aa15.94■□□□□ 0.14
LSM4-202ENST00000593564 PSMG3Q9BT73 122 aaPredicted RBP15.94■□□□□ 0.14
LSM4-202ENST00000593564 FLI1Q01543 452 aaPredicted RBP15.93■□□□□ 0.14
LSM4-202ENST00000593564 HSD17B11Q8NBQ5 300 aa15.93■□□□□ 0.14
LSM4-202ENST00000593564 EPDR1Q9UM22 224 aa15.93■□□□□ 0.14
LSM4-202ENST00000593564 GGTLC3B5MD39 225 aa15.92■□□□□ 0.14
LSM4-202ENST00000593564 SUMO1P63165 101 aaKnown RBP15.92■□□□□ 0.14
LSM4-202ENST00000593564 CYB561D1Q8N8Q1 229 aa15.92■□□□□ 0.14
LSM4-202ENST00000593564 TM2D2Q9BX73 214 aa15.92■□□□□ 0.14
LSM4-202ENST00000593564 A6NHS1 94 aa15.91■□□□□ 0.14
LSM4-202ENST00000593564 MBP02144 154 aa15.91■□□□□ 0.14
LSM4-202ENST00000593564 C1QBP02746 253 aa15.91■□□□□ 0.14
LSM4-202ENST00000593564 PRNTQ86SH4 94 aa15.91■□□□□ 0.14
LSM4-202ENST00000593564 TMEM167BQ9NRX6 74 aa15.91■□□□□ 0.14
LSM4-202ENST00000593564 ATP6V0CP27449 155 aa15.9■□□□□ 0.14
LSM4-202ENST00000593564 SERF2P84101 59 aa15.9■□□□□ 0.14
LSM4-202ENST00000593564 PIK3CD-AS1Q5SR53 167 aa15.9■□□□□ 0.14
LSM4-202ENST00000593564 SAPCD1Q5SSQ6 148 aa15.9■□□□□ 0.14
LSM4-202ENST00000593564 ZFP2Q6ZN57 461 aa15.9■□□□□ 0.14
LSM4-202ENST00000593564 SH3BGRL3Q9H299 93 aa15.9■□□□□ 0.14
LSM4-202ENST00000593564 PARLQ9H300 379 aa15.9■□□□□ 0.14
LSM4-202ENST00000593564 FAM30AQ9NZY2 134 aa15.9■□□□□ 0.14
LSM4-202ENST00000593564 CXorf1O96002 111 aa15.89■□□□□ 0.13
LSM4-202ENST00000593564 LINC00694P0DN24 101 aa15.89■□□□□ 0.13
LSM4-202ENST00000593564 AQP10Q96PS8 301 aa15.89■□□□□ 0.13
LSM4-202ENST00000593564 A8MWV9 139 aa15.88■□□□□ 0.13
LSM4-202ENST00000593564 WFDC2Q14508 124 aa15.87■□□□□ 0.13
LSM4-202ENST00000593564 Q8N3U1 123 aa15.87■□□□□ 0.13
LSM4-202ENST00000593564 IGKV3D-20A0A0C4DH25 116 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 A0A1W2PRE2 83 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 GAGE12JA6NER3 117 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 GAGE1Q13065 139 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 GAGE4Q13068 117 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 GAGE5Q13069 117 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 GAGE13Q4V321 117 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 ACTR3CQ9C0K3 210 aaPredicted RBP15.86■□□□□ 0.13
LSM4-202ENST00000593564 TNFSF18Q9UNG2 199 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 ALG5Q9Y673 324 aa15.86■□□□□ 0.13
LSM4-202ENST00000593564 TRAV8-3A0A0A6YYJ7 113 aa15.85■□□□□ 0.13
LSM4-202ENST00000593564 S100A4P26447 101 aaKnown RBP15.85■□□□□ 0.13
LSM4-202ENST00000593564 LGALSLQ3ZCW2 172 aaPredicted RBP15.85■□□□□ 0.13
LSM4-202ENST00000593564 ASIPP42127 132 aa15.84■□□□□ 0.13
LSM4-202ENST00000593564 TOR2AQ5JU69 321 aa15.84■□□□□ 0.13
LSM4-202ENST00000593564 Q6ZSA8 131 aa15.84■□□□□ 0.13
LSM4-202ENST00000593564 LINC00479Q96M42 142 aa15.84■□□□□ 0.13
LSM4-202ENST00000593564 ARL2-SNX15V9GYD0 113 aa15.84■□□□□ 0.13
LSM4-202ENST00000593564 TRAV34A0A0B4J273 112 aa15.83■□□□□ 0.12
LSM4-202ENST00000593564 FABP5P3A8MUU1 101 aa15.83■□□□□ 0.12
LSM4-202ENST00000593564 UFSP1Q6NVU6 142 aa15.83■□□□□ 0.12
LSM4-202ENST00000593564 A0A087WWC5 75 aa15.82■□□□□ 0.12
LSM4-202ENST00000593564 DAZ4Q86SG3 579 aaKnown RBP15.82■□□□□ 0.12
LSM4-202ENST00000593564 OR2T35Q8NGX2 323 aa15.82■□□□□ 0.12
LSM4-202ENST00000593564 DAZ3Q9NR90 486 aaKnown RBP15.82■□□□□ 0.12
LSM4-202ENST00000593564 IL36BQ9NZH7 164 aa15.82■□□□□ 0.12
LSM4-202ENST00000593564 Q9UF83 564 aa15.82■□□□□ 0.12
LSM4-202ENST00000593564 FGF8P55075 233 aaPredicted RBP15.81■□□□□ 0.12
LSM4-202ENST00000593564 SAMD10Q9BYL1 202 aa15.81■□□□□ 0.12
LSM4-202ENST00000593564 JPT2Q9H910 190 aa15.81■□□□□ 0.12
LSM4-202ENST00000593564 LECT2O14960 151 aa15.8■□□□□ 0.12
LSM4-202ENST00000593564 Q86TA4 180 aa15.8■□□□□ 0.12
LSM4-202ENST00000593564 C14orf178Q8N769 122 aaPredicted RBP15.8■□□□□ 0.12
LSM4-202ENST00000593564 COX11Q9Y6N1 276 aa15.8■□□□□ 0.12
LSM4-202ENST00000593564 RHODO00212 210 aa15.79■□□□□ 0.12
LSM4-202ENST00000593564 IFNA7P01567 189 aa15.79■□□□□ 0.12
LSM4-202ENST00000593564 B4DEV8 164 aa15.78■□□□□ 0.12
LSM4-202ENST00000593564 H3BVH4 76 aa15.78■□□□□ 0.12
LSM4-202ENST00000593564 PEX7O00628 323 aa15.78■□□□□ 0.12
LSM4-202ENST00000593564 PLA2G1BP04054 148 aaKnown RBP15.78■□□□□ 0.12
LSM4-202ENST00000593564 ZNF726P1Q15940 193 aa15.78■□□□□ 0.12
LSM4-202ENST00000593564 DNLZQ5SXM8 178 aa15.78■□□□□ 0.12
LSM4-202ENST00000593564 DMRTA1Q5VZB9 504 aa15.78■□□□□ 0.12
LSM4-202ENST00000593564 MED28Q9H204 178 aa15.78■□□□□ 0.12
LSM4-202ENST00000593564 CTXND1A0A1B0GTU2 59 aa15.77■□□□□ 0.12
LSM4-202ENST00000593564 J3QL48 77 aa15.77■□□□□ 0.12
LSM4-202ENST00000593564 Q5BKY6 102 aa15.77■□□□□ 0.12
LSM4-202ENST00000593564 RPL7L1Q6DKI1 246 aaKnown RBP15.77■□□□□ 0.12
LSM4-202ENST00000593564 SYT8Q8NBV8 401 aa15.77■□□□□ 0.12
LSM4-202ENST00000593564 HIST1H2BAQ96A08 127 aa15.77■□□□□ 0.12
LSM4-202ENST00000593564 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.76■□□□□ 0.11
LSM4-202ENST00000593564 UBE2G2P60604 165 aa15.76■□□□□ 0.11
LSM4-202ENST00000593564 LINC00528Q8N1L1 170 aa15.76■□□□□ 0.11
LSM4-202ENST00000593564 INO80EQ8NBZ0 244 aaPredicted RBP15.76■□□□□ 0.11
LSM4-202ENST00000593564 RMI2Q96E14 147 aa15.76■□□□□ 0.11
LSM4-202ENST00000593564 NKX6-2Q9C056 277 aaPredicted RBP15.76■□□□□ 0.11
LSM4-202ENST00000593564 BORCS7-ASMTA0A0B4J1R7 106 aa15.75■□□□□ 0.11
LSM4-202ENST00000593564 RNF222A6NCQ9 220 aa15.75■□□□□ 0.11
LSM4-202ENST00000593564 KRBOX1C9JBD0 128 aa15.75■□□□□ 0.11
LSM4-202ENST00000593564 ARMS2P0C7Q2 107 aa15.75■□□□□ 0.11
LSM4-202ENST00000593564 CRIP1P50238 77 aa15.75■□□□□ 0.11
LSM4-202ENST00000593564 COX8CQ7Z4L0 72 aa15.75■□□□□ 0.11
LSM4-202ENST00000593564 OR11H4Q8NGC9 324 aa15.75■□□□□ 0.11
LSM4-202ENST00000593564 BAALCQ8WXS3 180 aa15.75■□□□□ 0.11
LSM4-202ENST00000593564 URGCP-MRPS24S4R325 110 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms