RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RNASE3P12724 160 aaKnown RBP13.69□□□□□ -0.22
TRIM47-207ENST00000593089 CYB561D1Q8N8Q1 229 aa13.69□□□□□ -0.22
TRIM47-207ENST00000593089 NTN5Q8WTR8 489 aaPredicted RBP13.69□□□□□ -0.22
TRIM47-207ENST00000593089 VPS13BQ7Z7G8 4022 aa13.69□□□□□ -0.22
TRIM47-207ENST00000593089 MGST1P10620 155 aaKnown RBP13.68□□□□□ -0.22
TRIM47-207ENST00000593089 Q8N814 137 aa13.68□□□□□ -0.22
TRIM47-207ENST00000593089 ATP6V0E2Q8NHE4 81 aa13.68□□□□□ -0.22
TRIM47-207ENST00000593089 GTSF1LQ9H1H1 148 aa13.68□□□□□ -0.22
TRIM47-207ENST00000593089 SH3BGRL3Q9H299 93 aa13.68□□□□□ -0.22
TRIM47-207ENST00000593089 TMEM167BQ9NRX6 74 aa13.68□□□□□ -0.22
TRIM47-207ENST00000593089 BOLA1Q9Y3E2 137 aa13.68□□□□□ -0.22
TRIM47-207ENST00000593089 CXorf1O96002 111 aa13.67□□□□□ -0.22
TRIM47-207ENST00000593089 MBP02144 154 aa13.67□□□□□ -0.22
TRIM47-207ENST00000593089 PTH2Q96A98 100 aa13.67□□□□□ -0.22
TRIM47-207ENST00000593089 AQP10Q96PS8 301 aa13.67□□□□□ -0.22
TRIM47-207ENST00000593089 ACTR3CQ9C0K3 210 aaPredicted RBP13.67□□□□□ -0.22
TRIM47-207ENST00000593089 SERF2P84101 59 aa13.66□□□□□ -0.22
TRIM47-207ENST00000593089 SAPCD1Q5SSQ6 148 aa13.66□□□□□ -0.22
TRIM47-207ENST00000593089 Q6ZSN1 163 aa13.66□□□□□ -0.22
TRIM47-207ENST00000593089 FAM229AH3BQW9 127 aa13.65□□□□□ -0.22
TRIM47-207ENST00000593089 LINC00479Q96M42 142 aa13.65□□□□□ -0.22
TRIM47-207ENST00000593089 TMEM70Q9BUB7 260 aa13.65□□□□□ -0.22
TRIM47-207ENST00000593089 PARLQ9H300 379 aa13.65□□□□□ -0.22
TRIM47-207ENST00000593089 TNFSF18Q9UNG2 199 aa13.65□□□□□ -0.22
TRIM47-207ENST00000593089 DNAH8Q96JB1 4490 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 TRAV34A0A0B4J273 112 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 IGKV3D-20A0A0C4DH25 116 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 GAGE12JA6NER3 117 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 S100A4P26447 101 aaKnown RBP13.64□□□□□ -0.23
TRIM47-207ENST00000593089 GAGE1Q13065 139 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 GAGE4Q13068 117 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 GAGE5Q13069 117 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 GAGE13Q4V321 117 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 Q8N3U1 123 aa13.64□□□□□ -0.23
TRIM47-207ENST00000593089 LGALSLQ3ZCW2 172 aaPredicted RBP13.63□□□□□ -0.23
TRIM47-207ENST00000593089 Q5BKY6 102 aa13.63□□□□□ -0.23
TRIM47-207ENST00000593089 MED28Q9H204 178 aa13.63□□□□□ -0.23
TRIM47-207ENST00000593089 ARL2-SNX15V9GYD0 113 aa13.63□□□□□ -0.23
TRIM47-207ENST00000593089 A0A1W2PRE2 83 aa13.62□□□□□ -0.23
TRIM47-207ENST00000593089 A8MWV9 139 aa13.62□□□□□ -0.23
TRIM47-207ENST00000593089 LAGE3Q14657 143 aa13.62□□□□□ -0.23
TRIM47-207ENST00000593089 OR2T35Q8NGX2 323 aa13.62□□□□□ -0.23
TRIM47-207ENST00000593089 TM2D2Q9BX73 214 aa13.62□□□□□ -0.23
TRIM47-207ENST00000593089 DMBT1Q9UGM3 2413 aaPredicted RBP13.62□□□□□ -0.23
TRIM47-207ENST00000593089 IFNA7P01567 189 aa13.61□□□□□ -0.23
TRIM47-207ENST00000593089 ASIPP42127 132 aa13.61□□□□□ -0.23
TRIM47-207ENST00000593089 UBE2G2P60604 165 aa13.61□□□□□ -0.23
TRIM47-207ENST00000593089 WFDC2Q14508 124 aa13.61□□□□□ -0.23
TRIM47-207ENST00000593089 RPL7L1Q6DKI1 246 aaKnown RBP13.61□□□□□ -0.23
TRIM47-207ENST00000593089 ZFP2Q6ZN57 461 aa13.61□□□□□ -0.23
TRIM47-207ENST00000593089 JPT2Q9H910 190 aa13.61□□□□□ -0.23
TRIM47-207ENST00000593089 FAM30AQ9NZY2 134 aa13.61□□□□□ -0.23
TRIM47-207ENST00000593089 MYCBP2O75592 4640 aa13.6□□□□□ -0.23
TRIM47-207ENST00000593089 FABP5P3A8MUU1 101 aa13.6□□□□□ -0.23
TRIM47-207ENST00000593089 ZNF726P1Q15940 193 aa13.6□□□□□ -0.23
TRIM47-207ENST00000593089 Q9UF83 564 aa13.6□□□□□ -0.23
TRIM47-207ENST00000593089 LINC00694P0DN24 101 aa13.59□□□□□ -0.23
TRIM47-207ENST00000593089 INO80EQ8NBZ0 244 aaPredicted RBP13.59□□□□□ -0.23
TRIM47-207ENST00000593089 SAMD10Q9BYL1 202 aa13.59□□□□□ -0.23
TRIM47-207ENST00000593089 FLG2Q5D862 2391 aaPredicted RBP13.58□□□□□ -0.24
TRIM47-207ENST00000593089 BORCS7-ASMTA0A0B4J1R7 106 aa13.58□□□□□ -0.24
TRIM47-207ENST00000593089 B4DEV8 164 aa13.58□□□□□ -0.24
TRIM47-207ENST00000593089 H3BVH4 76 aa13.58□□□□□ -0.24
TRIM47-207ENST00000593089 PEX7O00628 323 aa13.58□□□□□ -0.24
TRIM47-207ENST00000593089 LECT2O14960 151 aa13.58□□□□□ -0.24
TRIM47-207ENST00000593089 PIK3CD-AS1Q5SR53 167 aa13.58□□□□□ -0.24
TRIM47-207ENST00000593089 DAZ4Q86SG3 579 aaKnown RBP13.58□□□□□ -0.24
TRIM47-207ENST00000593089 Q86TA4 180 aa13.58□□□□□ -0.24
TRIM47-207ENST00000593089 C14orf178Q8N769 122 aaPredicted RBP13.58□□□□□ -0.24
TRIM47-207ENST00000593089 DAZ3Q9NR90 486 aaKnown RBP13.58□□□□□ -0.24
TRIM47-207ENST00000593089 IL36BQ9NZH7 164 aa13.58□□□□□ -0.24
TRIM47-207ENST00000593089 TRAV8-3A0A0A6YYJ7 113 aa13.57□□□□□ -0.24
TRIM47-207ENST00000593089 CTXND1A0A1B0GTU2 59 aa13.57□□□□□ -0.24
TRIM47-207ENST00000593089 RNF222A6NCQ9 220 aa13.57□□□□□ -0.24
TRIM47-207ENST00000593089 PTTG1O95997 202 aa13.57□□□□□ -0.24
TRIM47-207ENST00000593089 FGF8P55075 233 aaPredicted RBP13.57□□□□□ -0.24
TRIM47-207ENST00000593089 UFSP1Q6NVU6 142 aa13.57□□□□□ -0.24
TRIM47-207ENST00000593089 FXYD6-FXYD2A0A087WZ82 144 aa13.56□□□□□ -0.24
TRIM47-207ENST00000593089 M0R036 132 aa13.56□□□□□ -0.24
TRIM47-207ENST00000593089 GIPP09681 153 aaPredicted RBP13.56□□□□□ -0.24
TRIM47-207ENST00000593089 DMRTA1Q5VZB9 504 aa13.56□□□□□ -0.24
TRIM47-207ENST00000593089 GRIFINA4D1Z8 144 aa13.55□□□□□ -0.24
TRIM47-207ENST00000593089 FAM74A7A6NL05 159 aa13.55□□□□□ -0.24
TRIM47-207ENST00000593089 ARMS2P0C7Q2 107 aa13.55□□□□□ -0.24
TRIM47-207ENST00000593089 CRIP1P50238 77 aa13.55□□□□□ -0.24
TRIM47-207ENST00000593089 TOR2AQ5JU69 321 aa13.55□□□□□ -0.24
TRIM47-207ENST00000593089 SYT8Q8NBV8 401 aa13.55□□□□□ -0.24
TRIM47-207ENST00000593089 ZC2HC1AQ96GY0 325 aa13.55□□□□□ -0.24
TRIM47-207ENST00000593089 SRRM2Q9UQ35 2752 aaKnown RBP13.55□□□□□ -0.24
TRIM47-207ENST00000593089 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.54□□□□□ -0.24
TRIM47-207ENST00000593089 A0A087WWC5 75 aa13.54□□□□□ -0.24
TRIM47-207ENST00000593089 KRBOX1C9JBD0 128 aa13.54□□□□□ -0.24
TRIM47-207ENST00000593089 C1QBP02746 253 aa13.54□□□□□ -0.24
TRIM47-207ENST00000593089 FAM74A4Q5TZK3 123 aa13.54□□□□□ -0.24
TRIM47-207ENST00000593089 OR11H4Q8NGC9 324 aa13.54□□□□□ -0.24
TRIM47-207ENST00000593089 HIST1H2BAQ96A08 127 aa13.54□□□□□ -0.24
TRIM47-207ENST00000593089 RHODO00212 210 aa13.53□□□□□ -0.24
TRIM47-207ENST00000593089 SH2D1AO60880 128 aa13.53□□□□□ -0.24
TRIM47-207ENST00000593089 AKR1C8PQ5T2L2 129 aa13.53□□□□□ -0.24
TRIM47-207ENST00000593089 BAALCQ8WXS3 180 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms