RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 CXCL1P09341 107 aa6.98□□□□□ -1.29
TPM4-216ENST00000592822 ZNF876PQ49A33 203 aa6.98□□□□□ -1.29
TPM4-216ENST00000592822 TMEM88Q6PEY1 159 aa6.98□□□□□ -1.29
TPM4-216ENST00000592822 DAZAP1Q96EP5 407 aaKnown RBP6.98□□□□□ -1.29
TPM4-216ENST00000592822 FAM210BQ96KR6 192 aa6.98□□□□□ -1.29
TPM4-216ENST00000592822 SMDT1Q9H4I9 107 aa6.98□□□□□ -1.29
TPM4-216ENST00000592822 BIN3Q9NQY0 253 aa6.98□□□□□ -1.29
TPM4-216ENST00000592822 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 P01737 135 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 SFTA3P0C7M3 94 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 MED14OSP0DP75 135 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 TCTAP57738 103 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 NUDT10Q8NFP7 164 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 OR2D3Q8NGH3 330 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 NUDT11Q96G61 164 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 ZNF479Q96JC4 524 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 NDUFAF3Q9BU61 184 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 LY96Q9Y6Y9 160 aa6.97□□□□□ -1.29
TPM4-216ENST00000592822 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.29
TPM4-216ENST00000592822 TRAV26-1A0A087WT03 109 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 TRAV4A0A0B4J268 109 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 RS1O15537 224 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 GZMBP10144 247 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 FHL2Q14192 279 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 FAM74A3Q4VXF1 159 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 DMRTA1Q5VZB9 504 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 LINC01551Q86U37 167 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 OR4C5Q8NGB2 326 aa6.96□□□□□ -1.3
TPM4-216ENST00000592822 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
TPM4-216ENST00000592822 RNASE7Q9H1E1 156 aaKnown RBP6.96□□□□□ -1.3
TPM4-216ENST00000592822 ALMS1Q8TCU4 4167 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 LCE6AA0A183 80 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 SNAI2O43623 268 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 IGLC6P0CF74 106 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 RPS20P60866 119 aaKnown RBP6.95□□□□□ -1.3
TPM4-216ENST00000592822 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 PIK3CD-AS1Q5SR53 167 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
TPM4-216ENST00000592822 CFAP126Q5VTH2 177 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 OR10AG1Q8NH19 301 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 VSIG2Q96IQ7 327 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 RPP21Q9H633 154 aaKnown RBP6.95□□□□□ -1.3
TPM4-216ENST00000592822 JPT2Q9H910 190 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 PHLDA3Q9Y5J5 127 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 VPS13DQ5THJ4 4388 aa6.95□□□□□ -1.3
TPM4-216ENST00000592822 TRGV4A0A0C4DH28 118 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 A0A0J9YY99 117 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 M0R381 172 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 NXPH4O95158 308 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 OR5AL1P0C617 328 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 CRYBA4P53673 196 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 RPL23P62829 140 aaKnown RBP6.94□□□□□ -1.3
TPM4-216ENST00000592822 SOHLH1Q5JUK2 328 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 FAM231DQ6ZW35 169 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 ZFP82Q8N141 532 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 SYT8Q8NBV8 401 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 LINC00476Q8WZB0 136 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 PRO0255Q9UI72 69 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 HHLA3Q9XRX5 114 aa6.94□□□□□ -1.3
TPM4-216ENST00000592822 IGHV3-73A0A0B4J1V6 119 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 XKRY2A2RUG3 117 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 A8MWV9 139 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 H3BNG1 76 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 GATCO43716 136 aaKnown RBP6.93□□□□□ -1.3
TPM4-216ENST00000592822 ERVFC1-1P60608 527 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 Q6ZSN1 163 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 FER1L6-AS1Q8NA97 138 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 ISOC2Q96AB3 205 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 NAT8Q9UHE5 227 aa6.93□□□□□ -1.3
TPM4-216ENST00000592822 RYR2Q92736 4967 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 PAX4O43316 350 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 CIDEAO60543 219 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 NUDT3O95989 172 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 GATA1P15976 413 aaPredicted RBP6.92□□□□□ -1.3
TPM4-216ENST00000592822 SLAQ13239 276 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 ADIRFQ15847 76 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 LGALS9CQ6DKI2 356 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 UFSP1Q6NVU6 142 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 ZFP2Q6ZN57 461 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 GTSF1Q8WW33 167 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 LYSTQ99698 3801 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 TPPP3Q9BW30 176 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 OSTCQ9NRP0 149 aa6.92□□□□□ -1.3
TPM4-216ENST00000592822 A0A096LPF7 62 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 A0A1W2PPQ1 181 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 F2Z2F3 143 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 LY6G6CO95867 125 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 CRYGDP07320 174 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 CTRLP40313 264 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 SSTP61278 116 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 SPANXN1Q5VSR9 72 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 LYZL1Q6UWQ5 148 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 COMMD7Q86VX2 200 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 SLC25A29Q8N8R3 303 aa6.91□□□□□ -1.3
TPM4-216ENST00000592822 RYR3Q15413 4870 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms