RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 TGFAP01135 160 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 CTSGP08311 255 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 CRYBA4P53673 196 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 C19orf54Q5BKX5 351 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 UBE2WQ96B02 151 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 SPATA25Q9BR10 227 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 TIMM21Q9BVV7 248 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 DAZ1Q9NQZ3 744 aaKnown RBP2.75□□□□□ -1.97
VMP1-216ENST00000592790 CSMD2Q7Z408 3487 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 IGHV4-4A0A075B6R2 117 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 PRSS29PA6NIE9 313 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 C11orf86A6NJI1 115 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 I3L3M4 83 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 J3QQQ9 107 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 K7ERJ3 54 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 RHODO00212 210 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 LEPROTO15243 131 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 DNAL4O96015 105 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 CD28P10747 220 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 FGF6P10767 208 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 IFITM1P13164 125 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 MRPL23Q16540 153 aaKnown RBP2.74□□□□□ -1.97
VMP1-216ENST00000592790 PRR31Q5SQ13 230 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 C2orf82Q6UX34 121 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 RNF152Q8N8N0 203 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 CFHR4Q92496 578 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 SPANXB1Q9NS25 103 aaPredicted RBP2.74□□□□□ -1.97
VMP1-216ENST00000592790 SLC25A20O43772 301 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 LGALS1P09382 135 aaKnown RBP2.74□□□□□ -1.97
VMP1-216ENST00000592790 EDN2P20800 178 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 EMP1P54849 157 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 GAGE5Q13069 117 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 GAGE6Q13070 117 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 PRSS33Q8NF86 280 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 TMEM101Q96IK0 257 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 C2CD3Q4AC94 2353 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 IGHV3OR16-13A0A075B7E8 117 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 IGHV3-74A0A0B4J1X5 117 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 LINC01546A6NGU7 62 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 C9JAW5 83 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 LYNX1G3V0Z9 82 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 ATP6V0E1O15342 81 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 IGHV1-69P01742 117 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 CFC1BP0CG36 223 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 CFC1P0CG37 223 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 INAFM2P0DMQ5 153 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 LYNX1P0DP58 116 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 FOXE3Q13461 319 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 UTF1Q5T230 341 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 ASPHD1Q5U4P2 390 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 DYNLRB2Q8TF09 96 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 PEMTQ9UBM1 199 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 TP73-AS1Q9UF72 201 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 DOCK7Q96N67 2140 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 SVEP1Q4LDE5 3571 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 TANC2Q9HCD6 1990 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 IGKV3-7A0A075B6H7 116 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 IGHV3-49A0A0A0MS15 119 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 A0A1W2PNU3 283 aaPredicted RBP2.74□□□□□ -1.97
VMP1-216ENST00000592790 SDHAF1A6NFY7 115 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 ODF3BA8MYP8 253 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 VWC2LB2RUY7 222 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 LY6LH3BQJ8 138 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 UBE2L6O14933 153 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 PLA2G5P39877 138 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 CMC4P56277 68 aaPredicted RBP2.74□□□□□ -1.97
VMP1-216ENST00000592790 DSCR9P59020 149 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 EBI3Q14213 229 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 FBXL19-AS1Q494R0 122 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 MEIG1Q5JSS6 88 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 RASL10AQ92737 203 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 RITA1Q96K30 269 aa2.74□□□□□ -1.97
VMP1-216ENST00000592790 IGHV3OR16-8A0A075B7F1 116 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 ZNF415Q09FC8 603 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 WFDC2Q14508 124 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 ANXA2RQ3ZCQ2 193 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 Q71RC1 249 aaPredicted RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 BEX4Q9NWD9 120 aaPredicted RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 IGHV7-81A0A0B4J1V7 117 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 GAGE12JA6NER3 117 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 H3BT86 120 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 GAGE7O76087 117 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 IGHV4-39P01824 125 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 GAGE12FP0CL80 117 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 GAGE12GP0CL81 117 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 GAGE12IP0CL82 117 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 GATA3P23771 443 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 SAA4P35542 130 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 CRIP1P50238 77 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 LOXL1Q08397 574 aaPredicted RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 GAGE4Q13068 117 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 S100A7L2Q5SY68 101 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 BAALCQ8WXS3 180 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 RNF185Q96GF1 192 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 DUX5Q96PT3 197 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 RHPN1-AS1Q9BWJ2 59 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 AKAP6Q13023 2319 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 ANK3Q12955 4377 aaKnown RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 SONP18583 2426 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms