RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 HOXA3O43365 443 aaPredicted RBP12.4□□□□□ -0.42
PRKCSH-217ENST00000592741 SEC11AP67812 179 aa12.4□□□□□ -0.42
PRKCSH-217ENST00000592741 UBE2V1Q13404 147 aa12.4□□□□□ -0.42
PRKCSH-217ENST00000592741 DEFB113Q30KQ7 82 aa12.4□□□□□ -0.42
PRKCSH-217ENST00000592741 Q5PR19 223 aa12.4□□□□□ -0.42
PRKCSH-217ENST00000592741 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
PRKCSH-217ENST00000592741 UBE2E2Q96LR5 201 aa12.4□□□□□ -0.42
PRKCSH-217ENST00000592741 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.43
PRKCSH-217ENST00000592741 KRTAP10-9P60411 292 aa12.4□□□□□ -0.43
PRKCSH-217ENST00000592741 PCP2Q8IVA1 136 aa12.4□□□□□ -0.43
PRKCSH-217ENST00000592741 LRRC75A-AS1Q8N1F1 130 aa12.4□□□□□ -0.43
PRKCSH-217ENST00000592741 WFDC12Q8WWY7 111 aa12.4□□□□□ -0.43
PRKCSH-217ENST00000592741 HHLA3Q9XRX5 114 aa12.4□□□□□ -0.43
PRKCSH-217ENST00000592741 A0A0J9YX75 114 aa12.39□□□□□ -0.43
PRKCSH-217ENST00000592741 HSD52Q0P140 79 aa12.39□□□□□ -0.43
PRKCSH-217ENST00000592741 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
PRKCSH-217ENST00000592741 CSPG4Q6UVK1 2322 aa12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 CD7P09564 240 aa12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 HOXD3P31249 432 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 VAMP3Q15836 100 aa12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 A0A087WX48 190 aa12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 CCL25O15444 150 aa12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 RNF152Q8N8N0 203 aa12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 CR1P17927 2039 aa12.38□□□□□ -0.43
PRKCSH-217ENST00000592741 CRYBG3Q68DQ2 2970 aa12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 UTP20O75691 2785 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 CBY3A6NI87 242 aa12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 TOMM6Q96B49 74 aa12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 TMEM160Q9NX00 188 aa12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 MRPL35Q9NZE8 188 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 ANKRD17O75179 2603 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 ZC2HC1BQ5TFG8 222 aa12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 SCGB3A1Q96QR1 104 aa12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 KIF25-AS1Q9Y6Z4 181 aa12.37□□□□□ -0.43
PRKCSH-217ENST00000592741 MYO18BQ8IUG5 2567 aa12.36□□□□□ -0.43
PRKCSH-217ENST00000592741 TRAV12-1A0A0B4J245 112 aa12.36□□□□□ -0.43
PRKCSH-217ENST00000592741 DUSP14O95147 198 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-217ENST00000592741 GTSCR1Q86UQ5 136 aa12.36□□□□□ -0.43
PRKCSH-217ENST00000592741 IGKV2D-26A0A0A0MRZ7 120 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 A6NDN8 102 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 IGKV3-20P01619 116 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 PLNP26678 52 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 ADAMTSL5Q6ZMM2 481 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 Q96MF0 132 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 DUX5Q96PT3 197 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 HLA-DRB4P13762 266 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 CSTL1Q9H114 145 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 HLA-DRB4X5D2U9 266 aa12.35□□□□□ -0.43
PRKCSH-217ENST00000592741 USP24Q9UPU5 2620 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 FBN2P35556 2912 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 CDKN1BP46527 198 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 LINC00315P59091 139 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 ERASQ7Z444 233 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 TRAV12-2A0A075B6T6 113 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 IGHV3-16A0A0C4DH30 117 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 H7C1H1 209 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 RPL32P62910 135 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 FOXI2Q6ZQN5 318 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 C9orf85Q96MD7 179 aa12.34□□□□□ -0.43
PRKCSH-217ENST00000592741 MAP1AP78559 2803 aaPredicted RBP12.33□□□□□ -0.43
PRKCSH-217ENST00000592741 F8VRH5 84 aa12.33□□□□□ -0.44
PRKCSH-217ENST00000592741 C2orf66Q6UXQ4 117 aa12.33□□□□□ -0.44
PRKCSH-217ENST00000592741 Q8N2B8 174 aa12.33□□□□□ -0.44
PRKCSH-217ENST00000592741 SYT8Q8NBV8 401 aa12.33□□□□□ -0.44
PRKCSH-217ENST00000592741 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
PRKCSH-217ENST00000592741 MUC4Q99102 2169 aa12.33□□□□□ -0.44
PRKCSH-217ENST00000592741 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
PRKCSH-217ENST00000592741 TCTEX1D4Q5JR98 221 aa12.32□□□□□ -0.44
PRKCSH-217ENST00000592741 SUMO4Q6EEV6 95 aa12.32□□□□□ -0.44
PRKCSH-217ENST00000592741 JPT2Q9H910 190 aa12.32□□□□□ -0.44
PRKCSH-217ENST00000592741 ZNF462Q96JM2 2506 aa12.32□□□□□ -0.44
PRKCSH-217ENST00000592741 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
PRKCSH-217ENST00000592741 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
PRKCSH-217ENST00000592741 CHTOPQ9Y3Y2 248 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-217ENST00000592741 PRRC2AP48634 2157 aaKnown RBP12.31□□□□□ -0.44
PRKCSH-217ENST00000592741 A0A087WWL8 130 aa12.31□□□□□ -0.44
PRKCSH-217ENST00000592741 F5H697 171 aa12.31□□□□□ -0.44
PRKCSH-217ENST00000592741 NEXN-AS1Q8NBZ9 246 aa12.31□□□□□ -0.44
PRKCSH-217ENST00000592741 H3BRM9 83 aa12.31□□□□□ -0.44
PRKCSH-217ENST00000592741 SLURP1P55000 103 aa12.31□□□□□ -0.44
PRKCSH-217ENST00000592741 UBR5O95071 2799 aaPredicted RBP12.3□□□□□ -0.44
PRKCSH-217ENST00000592741 Q8N1Y9 231 aa12.3□□□□□ -0.44
PRKCSH-217ENST00000592741 TTTY13Q9BZ97 58 aa12.3□□□□□ -0.44
PRKCSH-217ENST00000592741 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
PRKCSH-217ENST00000592741 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 C18orf65Q6ZTR6 163 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 NEGR1Q7Z3B1 354 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 BAALCQ8WXS3 180 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 CHAC1Q9BUX1 264 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 CSMD2Q7Z408 3487 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 FAM208BQ5VWN6 2430 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 LINC01549A6NIU2 74 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 LINC01619G3V211 115 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 DEFB136Q30KP8 78 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 CYSLTR1Q9Y271 337 aa12.29□□□□□ -0.44
PRKCSH-217ENST00000592741 TRBV25-1A0A075B6N4 114 aa12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 VCYO14598 125 aa12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
PRKCSH-217ENST00000592741 FAM74A4Q5TZK3 123 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms