RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SMIM7Q9BQ49 75 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 PARLQ9H300 379 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 GSN-AS1Q9NRJ2 163 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 TP53TG3Q9ULZ0 132 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 ZFP30Q9Y2G7 519 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 PAM16Q9Y3D7 125 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 KLF12Q9Y4X4 402 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
VPS4B-205ENST00000591383 DYNC2H1Q8NCM8 4307 aaKnown RBP4.57□□□□□ -1.68
VPS4B-205ENST00000591383 TENM2Q9NT68 2774 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 TRGV1A0A0A0MS02 117 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 A0A1W2PPQ1 181 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 C5orf52A6NGY3 159 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 B4DEV8 164 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 TMEM250H0YL14 139 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 H3BVH4 76 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 ZNF324O75467 553 aaPredicted RBP4.57□□□□□ -1.68
VPS4B-205ENST00000591383 ORM1P02763 201 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 TYMSP04818 313 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 SPART-AS1P0CW21 52 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 DEFB130BP0DP73 79 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 DEFB130AP0DP74 79 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 DAD1P61803 113 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 IFITM2Q01629 132 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 GAGE2BQ13066 116 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 OR5I1Q13606 314 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 GAGE2EQ4V326 116 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 GAGE2AQ6NT46 116 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 ZNF493Q6ZR52 646 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 Q6ZTC4 211 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 MUC7Q8TAX7 377 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 NOP10Q9NPE3 64 aaKnown RBP4.57□□□□□ -1.68
VPS4B-205ENST00000591383 MRPL16Q9NX20 251 aaKnown RBP4.57□□□□□ -1.68
VPS4B-205ENST00000591383 C11orf21Q9P2W6 132 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 GAGE2DQ9UEU5 116 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 STARD9Q9P2P6 4700 aa4.57□□□□□ -1.68
VPS4B-205ENST00000591383 TRBV20OR9-2A0A075B6H5 130 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 PLAC8L1A1L4L8 177 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 LYRM9A8MSI8 78 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 GAGE7O76087 117 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 SRP19P09132 144 aaKnown RBP4.56□□□□□ -1.68
VPS4B-205ENST00000591383 GAGE12FP0CL80 117 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 GAGE12GP0CL81 117 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 GAGE12IP0CL82 117 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 S100A4P26447 101 aaKnown RBP4.56□□□□□ -1.68
VPS4B-205ENST00000591383 ASIPP42127 132 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 TCL1AP56279 114 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 RPL19P84098 196 aaKnown RBP4.56□□□□□ -1.68
VPS4B-205ENST00000591383 PEA15Q15121 130 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 CLLU1Q5K131 121 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 PAPPA-AS1Q5QFB9 102 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 IBA57Q5T440 356 aaKnown RBP4.56□□□□□ -1.68
VPS4B-205ENST00000591383 Q6ZTI0 123 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 Q8N1X5 172 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 C11orf72Q8NBR9 251 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 KCNS1Q96KK3 526 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 LINC00467Q9BRT7 94 aa4.56□□□□□ -1.68
VPS4B-205ENST00000591383 TRGV2A0A075B6R0 118 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 IGHV3-16A0A0C4DH30 117 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 GRIFINA4D1Z8 144 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 FABP5P3A8MUU1 101 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 C9JCJ5 164 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 GNRH2O43555 120 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 IGLV2-8P01709 118 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 P01737 135 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 ADIRFQ15847 76 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 TDRG1Q3Y452 100 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 C10orf25Q5T742 122 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 COMMD7Q86VX2 200 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 OR2D3Q8NGH3 330 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 PHLDA1Q8WV24 401 aaPredicted RBP4.55□□□□□ -1.68
VPS4B-205ENST00000591383 URB1-AS1Q96HZ7 61 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 TPPP3Q9BW30 176 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 MDFICQ9P1T7 246 aa4.55□□□□□ -1.68
VPS4B-205ENST00000591383 TRAV10A0A0B4J240 114 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 IGKV3D-20A0A0C4DH25 116 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 NUPR2A6NF83 97 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 KRBOX1C9JBD0 128 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 C9JQL5 133 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 K7EN84 100 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 IGHV3-53P01767 116 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 SFTA3P0C7M3 94 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 CRIP1P50238 77 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 SEC61BP60468 96 aaKnown RBP4.54□□□□□ -1.68
VPS4B-205ENST00000591383 C12orf74Q32Q52 190 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 WDR73Q6P4I2 378 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 COX8CQ7Z4L0 72 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 NEXN-AS1Q8NBZ9 246 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 SMIM12Q96EX1 92 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 BIN3Q9NQY0 253 aa4.54□□□□□ -1.68
VPS4B-205ENST00000591383 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.68
VPS4B-205ENST00000591383 F5H768 121 aa4.53□□□□□ -1.68
VPS4B-205ENST00000591383 M0R2P5 195 aa4.53□□□□□ -1.68
VPS4B-205ENST00000591383 ATP5G1P05496 136 aa4.53□□□□□ -1.68
VPS4B-205ENST00000591383 GZMBP10144 247 aa4.53□□□□□ -1.68
VPS4B-205ENST00000591383 DAZ2Q13117 558 aaKnown RBP4.53□□□□□ -1.68
VPS4B-205ENST00000591383 LBHQ53QV2 105 aaPredicted RBP4.53□□□□□ -1.68
VPS4B-205ENST00000591383 SOHLH1Q5JUK2 328 aa4.53□□□□□ -1.68
VPS4B-205ENST00000591383 SPXQ9BT56 116 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms