RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 C9JCJ5 164 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 M0R036 132 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 PAX4O43316 350 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 SFTA3P0C7M3 94 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 CCL18P55774 89 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 FHL2Q14192 279 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 PIK3CD-AS1Q5SR53 167 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 OR4C5Q8NGB2 326 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 SMIM12Q96EX1 92 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 VSIG2Q96IQ7 327 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 ZNF479Q96JC4 524 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
LIG3-213ENST00000590630 CIDEAO60543 219 aa8.28□□□□□ -1.08
LIG3-213ENST00000590630 GNG4P50150 75 aa8.28□□□□□ -1.08
LIG3-213ENST00000590630 CRYBA4P53673 196 aa8.28□□□□□ -1.08
LIG3-213ENST00000590630 CENPWQ5EE01 88 aa8.28□□□□□ -1.08
LIG3-213ENST00000590630 ZNF506Q5JVG8 444 aa8.28□□□□□ -1.08
LIG3-213ENST00000590630 MED9Q9NWA0 146 aa8.28□□□□□ -1.08
LIG3-213ENST00000590630 A0A096LPF7 62 aa8.27□□□□□ -1.09
LIG3-213ENST00000590630 RBFOX3A6NFN3 312 aa8.27□□□□□ -1.09
LIG3-213ENST00000590630 PGPEP1LA6NFU8 196 aa8.27□□□□□ -1.09
LIG3-213ENST00000590630 H3BVH4 76 aa8.27□□□□□ -1.09
LIG3-213ENST00000590630 ICOSQ9Y6W8 199 aa8.27□□□□□ -1.09
LIG3-213ENST00000590630 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 TMEM250H0YL14 139 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 RS1O15537 224 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 CXCL1P09341 107 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 ARMS2P0C7Q2 107 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 CFAP126Q5VTH2 177 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 PRR27Q6MZM9 219 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 SYT8Q8NBV8 401 aa8.26□□□□□ -1.09
LIG3-213ENST00000590630 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 RAB19A4D1S5 217 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 GRIFINA4D1Z8 144 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 A8MWV9 139 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 IGLV2-8P01709 118 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 MRPL23Q16540 153 aaKnown RBP8.25□□□□□ -1.09
LIG3-213ENST00000590630 TEX261Q6UWH6 196 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 PCNPQ8WW12 178 aaKnown RBP8.25□□□□□ -1.09
LIG3-213ENST00000590630 SCRT2Q9NQ03 307 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 BIN3Q9NQY0 253 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 LINC00588Q9Y4M8 146 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 PHLDA3Q9Y5J5 127 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 FRAS1Q86XX4 4008 aa8.25□□□□□ -1.09
LIG3-213ENST00000590630 NDUFS6O75380 124 aaKnown RBP8.24□□□□□ -1.09
LIG3-213ENST00000590630 MGST1P10620 155 aaKnown RBP8.24□□□□□ -1.09
LIG3-213ENST00000590630 GATA1P15976 413 aaPredicted RBP8.24□□□□□ -1.09
LIG3-213ENST00000590630 ESRGQ1W209 222 aa8.24□□□□□ -1.09
LIG3-213ENST00000590630 TOR2AQ5JU69 321 aa8.24□□□□□ -1.09
LIG3-213ENST00000590630 ZFP2Q6ZN57 461 aa8.24□□□□□ -1.09
LIG3-213ENST00000590630 ZNRF2Q8NHG8 242 aa8.24□□□□□ -1.09
LIG3-213ENST00000590630 DAZAP1Q96EP5 407 aaKnown RBP8.24□□□□□ -1.09
LIG3-213ENST00000590630 TRBV6-4A0A1B0GX49 114 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 K7EQD1 137 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 GYPEP15421 78 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 SRIP30626 198 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 RPL19P84098 196 aaKnown RBP8.23□□□□□ -1.09
LIG3-213ENST00000590630 CLLU1Q5K131 121 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 DMRTA1Q5VZB9 504 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 NEGR1Q7Z3B1 354 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 ZFP82Q8N141 532 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 UPK3BQ9BT76 320 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 EIF5A2Q9GZV4 153 aaKnown RBP8.23□□□□□ -1.09
LIG3-213ENST00000590630 PARLQ9H300 379 aa8.23□□□□□ -1.09
LIG3-213ENST00000590630 MRPS16Q9Y3D3 137 aaKnown RBP8.23□□□□□ -1.09
LIG3-213ENST00000590630 IGLV2-18A0A075B6J9 118 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 C19orf71A6NCJ1 209 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 M0R381 172 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 RHODO00212 210 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 RPS20P60866 119 aaKnown RBP8.22□□□□□ -1.09
LIG3-213ENST00000590630 RHOHQ15669 191 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 Q6ZR54 194 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 SH2D6Q7Z4S9 175 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 SLC25A29Q8N8R3 303 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 PRADC1Q9BSG0 188 aa8.22□□□□□ -1.09
LIG3-213ENST00000590630 IGHV3-73A0A0B4J1V6 119 aa8.21□□□□□ -1.1
LIG3-213ENST00000590630 XKRY2A2RUG3 117 aa8.21□□□□□ -1.1
LIG3-213ENST00000590630 M0R2N4 97 aa8.21□□□□□ -1.1
LIG3-213ENST00000590630 SNAI2O43623 268 aa8.21□□□□□ -1.1
LIG3-213ENST00000590630 NXPH4O95158 308 aa8.21□□□□□ -1.1
LIG3-213ENST00000590630 P01737 135 aa8.21□□□□□ -1.1
LIG3-213ENST00000590630 SFRP2Q96HF1 295 aa8.21□□□□□ -1.1
LIG3-213ENST00000590630 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
LIG3-213ENST00000590630 RAB14P61106 215 aa8.2□□□□□ -1.1
LIG3-213ENST00000590630 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
LIG3-213ENST00000590630 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
LIG3-213ENST00000590630 OR2D3Q8NGH3 330 aa8.2□□□□□ -1.1
LIG3-213ENST00000590630 OR10AG1Q8NH19 301 aa8.2□□□□□ -1.1
LIG3-213ENST00000590630 Q9H8V8 135 aa8.2□□□□□ -1.1
LIG3-213ENST00000590630 JPT2Q9H910 190 aa8.2□□□□□ -1.1
LIG3-213ENST00000590630 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
LIG3-213ENST00000590630 NBDYA0A0U1RRE5 68 aa8.19□□□□□ -1.1
LIG3-213ENST00000590630 CEBPGP53567 150 aa8.19□□□□□ -1.1
LIG3-213ENST00000590630 CTAG1AP78358 180 aa8.19□□□□□ -1.1
LIG3-213ENST00000590630 FAM74A4Q5TZK3 123 aa8.19□□□□□ -1.1
LIG3-213ENST00000590630 SPANXN1Q5VSR9 72 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms