RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
ZNF540-209ENST00000590588 MEOX2P50222 304 aa7.52□□□□□ -1.21
ZNF540-209ENST00000590588 TMEM183BQ1AE95 376 aa7.52□□□□□ -1.21
ZNF540-209ENST00000590588 SMUG1Q53HV7 270 aa7.52□□□□□ -1.21
ZNF540-209ENST00000590588 BPIFA4PQ86YQ2 179 aa7.52□□□□□ -1.21
ZNF540-209ENST00000590588 FMC1Q96HJ9 113 aa7.52□□□□□ -1.21
ZNF540-209ENST00000590588 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
ZNF540-209ENST00000590588 OTORQ9NRC9 128 aa7.52□□□□□ -1.21
ZNF540-209ENST00000590588 A0A0J9YY99 117 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 FAM231BA6NCW3 169 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 H3BNG1 76 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 H3BRN7 92 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BKO60814 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 OXTP01178 125 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BJP06899 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 NBEAP1P0C6P0 100 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 RD3LP0DJH9 198 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 AZU1P20160 251 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BOP23527 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BBP33778 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BDP58876 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 SNRPEP62304 92 aaKnown RBP7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BCP62807 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 ZNF90Q03938 601 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 FABP9Q0Z7S8 132 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST2H2BEQ16778 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 CENPWQ5EE01 88 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-209ENST00000590588 WDR73Q6P4I2 378 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 OR10J6PQ8NGY7 276 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 OCC1Q8TAD7 63 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BHQ93079 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 GPR82Q96P67 336 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BNQ99877 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 HIST1H2BMQ99879 126 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 TIMM8BQ9Y5J9 83 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-209ENST00000590588 TNFRSF18Q9Y5U5 241 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
ZNF540-209ENST00000590588 SOCS3O14543 225 aa7.5□□□□□ -1.21
ZNF540-209ENST00000590588 INSP01308 110 aa7.5□□□□□ -1.21
ZNF540-209ENST00000590588 PSG1P11464 419 aa7.5□□□□□ -1.21
ZNF540-209ENST00000590588 GATA2P23769 480 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-209ENST00000590588 SUMO1P63165 101 aaKnown RBP7.5□□□□□ -1.21
ZNF540-209ENST00000590588 AMTNQ6UX39 209 aa7.5□□□□□ -1.21
ZNF540-209ENST00000590588 RNF125Q96EQ8 232 aa7.5□□□□□ -1.21
ZNF540-209ENST00000590588 DERL1Q9BUN8 251 aa7.5□□□□□ -1.21
ZNF540-209ENST00000590588 ZNF492Q9P255 531 aa7.5□□□□□ -1.21
ZNF540-209ENST00000590588 EPDR1Q9UM22 224 aa7.5□□□□□ -1.21
ZNF540-209ENST00000590588 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 DNAH8Q96JB1 4490 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 ZNF98A6NK75 572 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 A8MTW9 85 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 K7EQM0 130 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 CRXO43186 299 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-209ENST00000590588 TRGC2P03986 189 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 ATP5L2Q7Z4Y8 100 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 TMEM183AQ8IXX5 376 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 OR1B1Q8NGR6 318 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 PACRGQ96M98 296 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-209ENST00000590588 LINC01587Q99440 93 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 GNB1LQ9BYB4 327 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 SLC25A39Q9BZJ4 359 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-209ENST00000590588 GFRA4Q9GZZ7 299 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 V9GYV3 84 aa7.49□□□□□ -1.21
ZNF540-209ENST00000590588 K7EN84 100 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 M0R2Z0 102 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 IGLV2-8P01709 118 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 TRGC1P0CF51 173 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 RPL7P18124 248 aaKnown RBP7.48□□□□□ -1.21
ZNF540-209ENST00000590588 ORM2P19652 201 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 S100A2P29034 98 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 AKR1D1P51857 326 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 UBE2G1P62253 170 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 SPINK13Q1W4C9 94 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 IBA57Q5T440 356 aaKnown RBP7.48□□□□□ -1.21
ZNF540-209ENST00000590588 SAMD13Q5VXD3 122 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 ZFP82Q8N141 532 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 TMEM75Q8N9X5 138 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 C16orf74Q96GX8 76 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 NOP10Q9NPE3 64 aaKnown RBP7.48□□□□□ -1.21
ZNF540-209ENST00000590588 ZFP30Q9Y2G7 519 aa7.48□□□□□ -1.21
ZNF540-209ENST00000590588 TRAV9-2A0A087WT02 112 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 IGLV5-52A0A0A0MRZ9 124 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 SMIM27A0A1W2PRY6 76 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 EIF3GO75821 320 aaKnown RBP eCLIP7.47□□□□□ -1.21
ZNF540-209ENST00000590588 DUSP14O95147 198 aaKnown RBP7.47□□□□□ -1.21
ZNF540-209ENST00000590588 LTAP01374 205 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 HLA-DQA1P01909 254 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 TCRAP04437 139 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 IGLC2P0DOY2 106 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 HTN1P15515 57 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 LYZP61626 148 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 C1orf194Q5T5A4 169 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 ZNF493Q6ZR52 646 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 COX8CQ7Z4L0 72 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 BAGE2Q86Y30 109 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 TMEM256Q8N2U0 113 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 C16orf92Q96LL3 132 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 MLST8Q9BVC4 326 aa7.47□□□□□ -1.21
ZNF540-209ENST00000590588 TRBV19A0A075B6N1 114 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms