RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 INSP01308 110 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 RNASE1P07998 156 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 BLCAPP62952 87 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 Q5PR19 223 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 KLHL30-AS1Q8NEE0 82 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 IGLL5B9A064 214 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 CCDC140Q96MF4 163 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 TANC2Q9HCD6 1990 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 PF4P02776 101 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 IGLC6P0CF74 106 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 LINC01548A6NM66 108 aa13.16□□□□□ -0.3
SMARCA4-215ENST00000590574 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
SMARCA4-215ENST00000590574 J3QQQ9 107 aa13.16□□□□□ -0.3
SMARCA4-215ENST00000590574 CKS1BP61024 79 aa13.16□□□□□ -0.3
SMARCA4-215ENST00000590574 AJUBAQ96IF1 538 aa13.16□□□□□ -0.3
SMARCA4-215ENST00000590574 HIGD1BQ9P298 99 aa13.16□□□□□ -0.3
SMARCA4-215ENST00000590574 TRBV7-9A0A0J9YWB2 115 aa13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 TCTEX1D4Q5JR98 221 aa13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 TRGV4A0A0C4DH28 118 aa13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 IGHV3-16A0A0C4DH30 117 aa13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 SPINK8P0C7L1 97 aa13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 SUMO4Q6EEV6 95 aa13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 RPL36AP83881 106 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 C2orf82Q6UX34 121 aa13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 RPL36ALQ969Q0 106 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-215ENST00000590574 ANKHD1Q8IWZ3 2542 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-215ENST00000590574 C10orf126Q8N4M7 172 aa13.14□□□□□ -0.31
SMARCA4-215ENST00000590574 OTOGLQ3ZCN5 2332 aa13.14□□□□□ -0.31
SMARCA4-215ENST00000590574 TRBV20-1A0A075B6N2 111 aa13.14□□□□□ -0.31
SMARCA4-215ENST00000590574 TRBV12-3P01733 135 aa13.14□□□□□ -0.31
SMARCA4-215ENST00000590574 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
SMARCA4-215ENST00000590574 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
SMARCA4-215ENST00000590574 GAGE12HA6NDE8 117 aa13.13□□□□□ -0.31
SMARCA4-215ENST00000590574 IGHV4-59P01825 116 aa13.13□□□□□ -0.31
SMARCA4-215ENST00000590574 TRAV13-1A0A0B4J241 112 aa13.13□□□□□ -0.31
SMARCA4-215ENST00000590574 TEX48A0A1B0GUV7 120 aa13.13□□□□□ -0.31
SMARCA4-215ENST00000590574 PRO1854Q9UHT4 67 aa13.13□□□□□ -0.31
SMARCA4-215ENST00000590574 TOMM6Q96B49 74 aa13.13□□□□□ -0.31
SMARCA4-215ENST00000590574 ZFAND6Q6FIF0 208 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 IGHV3-38A0A0C4DH36 116 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 FSTL3O95633 263 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 TRAV12-1A0A0B4J245 112 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 DEFB112Q30KQ8 113 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 RNASE13Q5GAN3 156 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 ZFP2Q6ZN57 461 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 BAALCQ8WXS3 180 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 RASL10AQ92737 203 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 URB1-AS1Q96HZ7 61 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 U3KQK5 164 aa13.12□□□□□ -0.31
SMARCA4-215ENST00000590574 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.11□□□□□ -0.318e-7■■■■□ 21.9
SMARCA4-215ENST00000590574 LINC01619G3V211 115 aa13.11□□□□□ -0.31
SMARCA4-215ENST00000590574 FOXI2Q6ZQN5 318 aa13.11□□□□□ -0.31
SMARCA4-215ENST00000590574 SH2D6Q7Z4S9 175 aa13.11□□□□□ -0.31
SMARCA4-215ENST00000590574 CHCHD5Q9BSY4 110 aa13.11□□□□□ -0.31
SMARCA4-215ENST00000590574 GAGE2BQ13066 116 aa13.11□□□□□ -0.31
SMARCA4-215ENST00000590574 GAGE2EQ4V326 116 aa13.11□□□□□ -0.31
SMARCA4-215ENST00000590574 GAGE2DQ9UEU5 116 aa13.11□□□□□ -0.31
SMARCA4-215ENST00000590574 IGHV4-30-2A0A087WSY4 118 aa13.1□□□□□ -0.31
SMARCA4-215ENST00000590574 AZU1P20160 251 aa13.1□□□□□ -0.31
SMARCA4-215ENST00000590574 FGF6P10767 208 aa13.1□□□□□ -0.31
SMARCA4-215ENST00000590574 PPDPFLQ8WWR9 84 aa13.1□□□□□ -0.31
SMARCA4-215ENST00000590574 NAV3Q8IVL0 2385 aa13.1□□□□□ -0.31
SMARCA4-215ENST00000590574 ZNF625Q96I27 306 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-215ENST00000590574 ATP6V0BQ99437 205 aa13.1□□□□□ -0.31
SMARCA4-215ENST00000590574 RPL39P62891 51 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-215ENST00000590574 TRAV8-3A0A0A6YYJ7 113 aa13.09□□□□□ -0.31
SMARCA4-215ENST00000590574 RHODO00212 210 aa13.09□□□□□ -0.31
SMARCA4-215ENST00000590574 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.31
SMARCA4-215ENST00000590574 RPL35AP18077 110 aaKnown RBP13.08□□□□□ -0.31
SMARCA4-215ENST00000590574 LINC00158P58513 81 aa13.08□□□□□ -0.31
SMARCA4-215ENST00000590574 NSUN5P1Q3KNT7 163 aa13.08□□□□□ -0.31
SMARCA4-215ENST00000590574 RNF185Q96GF1 192 aa13.08□□□□□ -0.31
SMARCA4-215ENST00000590574 NDUFA12Q9UI09 145 aa13.08□□□□□ -0.31
SMARCA4-215ENST00000590574 RHOHQ15669 191 aa13.08□□□□□ -0.32
SMARCA4-215ENST00000590574 DSCAMO60469 2012 aa13.08□□□□□ -0.32
SMARCA4-215ENST00000590574 GATD1Q8NB37 220 aa13.08□□□□□ -0.32
SMARCA4-215ENST00000590574 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
SMARCA4-215ENST00000590574 SCGB1A1P11684 91 aa13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 RBMY1BA6NDE4 496 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 RBMY1EA6NEQ0 496 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 RBMY1DP0C7P1 496 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 RBMY1A1P0DJD3 496 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 RBMY1CP0DJD4 496 aa13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 HOXD3P31249 432 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 PRIMA1Q86XR5 153 aa13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 WFDC2Q14508 124 aa13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 Q71RC1 249 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-215ENST00000590574 EBI3Q14213 229 aa13.06□□□□□ -0.32
SMARCA4-215ENST00000590574 ELANEP08246 267 aa13.06□□□□□ -0.32
SMARCA4-215ENST00000590574 LMO4P61968 165 aa13.06□□□□□ -0.32
SMARCA4-215ENST00000590574 C10orf105Q8TEF2 133 aa13.06□□□□□ -0.32
SMARCA4-215ENST00000590574 CREBBPQ92793 2442 aa13.06□□□□□ -0.32
SMARCA4-215ENST00000590574 IGF1P05019 195 aa13.06□□□□□ -0.32
SMARCA4-215ENST00000590574 C11orf68Q9H3H3 251 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-215ENST00000590574 E9PLD3 99 aa13.05□□□□□ -0.32
SMARCA4-215ENST00000590574 MED14OSP0DP75 135 aa13.05□□□□□ -0.32
SMARCA4-215ENST00000590574 C2orf91Q6ZV80 131 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms