RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 UBE2G2P60604 165 aa8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 IBA57Q5T440 356 aaKnown RBP8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 CMTM2Q8TAZ6 248 aa8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 SUN5Q8TC36 379 aa8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 MBD3L1Q8WWY6 194 aa8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 AGPAT4-IT1Q9H0P7 198 aa8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 RPH3ALQ9UNE2 315 aa8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 IGHV3-38A0A0C4DH36 116 aa8.42□□□□□ -1.06
PRKCSH-210ENST00000589990 SUMO1P63165 101 aaKnown RBP8.42□□□□□ -1.06
PRKCSH-210ENST00000589990 SLAQ13239 276 aa8.42□□□□□ -1.06
PRKCSH-210ENST00000589990 Q8N3U1 123 aa8.42□□□□□ -1.06
PRKCSH-210ENST00000589990 IGHV1OR15-1A0A075B7D0 117 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 IGKV2-40A0A087WW87 121 aaPredicted RBP8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 A0A1W2PRE2 83 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 IGKV2D-40P01614 121 aaPredicted RBP8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 IGHV3-30P01768 117 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 IGHV3-33P01772 117 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 MT1HL1P0DM35 61 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 IGHV3-30-5P0DP03 117 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 TMEM78Q5T7P6 136 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 ALKAL2Q6UX46 152 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 ZFAND2AQ8N6M9 145 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 CIRBP-AS1Q8TBR5 109 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 PCNPQ8WW12 178 aaKnown RBP8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
PRKCSH-210ENST00000589990 DIRC3C9JPN6 131 aa8.4□□□□□ -1.06
PRKCSH-210ENST00000589990 RGS13O14921 159 aa8.4□□□□□ -1.06
PRKCSH-210ENST00000589990 IFNA7P01567 189 aa8.4□□□□□ -1.06
PRKCSH-210ENST00000589990 GPX1P07203 203 aa8.4□□□□□ -1.06
PRKCSH-210ENST00000589990 CST9LP1Q5W188 147 aa8.4□□□□□ -1.06
PRKCSH-210ENST00000589990 FAM74A7A6NL05 159 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 CRISP2P16562 243 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 GNG5P63218 68 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 CCL20P78556 96 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 MUC21Q5SSG8 566 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 C9orf47Q6ZRZ4 202 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 GOLT1AQ6ZVE7 132 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 ARL6IP6Q8N6S5 226 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 CHAC1Q9BUX1 264 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 NKX6-2Q9C056 277 aaPredicted RBP8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 EPDR1Q9UM22 224 aa8.39□□□□□ -1.07
PRKCSH-210ENST00000589990 TNXBP22105 4242 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 GGTLC3B5MD39 225 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 K7EQM0 130 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 PAGE4O60829 102 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 IGLV2-8P01709 118 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 ORM1P02763 201 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 PPT1P50897 306 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 ZNF138P52744 262 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 DAZAP1Q96EP5 407 aaKnown RBP8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 TXNDC17Q9BRA2 123 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 ZNF492Q9P255 531 aa8.38□□□□□ -1.07
PRKCSH-210ENST00000589990 TRAV1-1A0A0B4J248 108 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 IGHV3-16A0A0C4DH30 117 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 RBAKDNA6NC62 111 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 TCRAP04437 139 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 NHLRC2Q8NBF2 726 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 Q8TAT8 98 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 GNG13Q9P2W3 67 aa8.37□□□□□ -1.07
PRKCSH-210ENST00000589990 TRAV8-1A0A0A6YYK1 113 aa8.36□□□□□ -1.07
PRKCSH-210ENST00000589990 C9JCJ5 164 aa8.36□□□□□ -1.07
PRKCSH-210ENST00000589990 BAALCQ8WXS3 180 aa8.36□□□□□ -1.07
PRKCSH-210ENST00000589990 SERTM2A0A1B0GWG4 89 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 F6UZH7 168 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 TIRAPP58753 221 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 OR10J3Q5JRS4 329 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 CYB561D1Q8N8Q1 229 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 RASL10AQ92737 203 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 HIST1H2BAQ96A08 127 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 MANBALQ9NQG1 85 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 PSG8Q9UQ74 426 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 ARL2-SNX15V9GYD0 113 aa8.35□□□□□ -1.07
PRKCSH-210ENST00000589990 TRAV34A0A0B4J273 112 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 PEX7O00628 323 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 IFNA1P01562 189 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 ASIPP42127 132 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 FLI1Q01543 452 aaPredicted RBP8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 TMEM183BQ1AE95 376 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 TEX261Q6UWH6 196 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 PRNTQ86SH4 94 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 TMEM183AQ8IXX5 376 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 DNAJC30Q96LL9 226 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 LINC00479Q96M42 142 aa8.34□□□□□ -1.07
PRKCSH-210ENST00000589990 TRAV8-6A0A0B4J262 113 aa8.33□□□□□ -1.08
PRKCSH-210ENST00000589990 TRAV4A0A0B4J268 109 aa8.33□□□□□ -1.08
PRKCSH-210ENST00000589990 NMBP08949 121 aa8.33□□□□□ -1.08
PRKCSH-210ENST00000589990 NDFIP1Q9BT67 221 aa8.33□□□□□ -1.08
PRKCSH-210ENST00000589990 TREM1Q9NP99 234 aa8.33□□□□□ -1.08
PRKCSH-210ENST00000589990 LENEPQ9Y5L5 61 aa8.33□□□□□ -1.08
PRKCSH-210ENST00000589990 TRBV7-9A0A0J9YWB2 115 aa8.32□□□□□ -1.08
PRKCSH-210ENST00000589990 RBFOX3A6NFN3 312 aa8.32□□□□□ -1.08
PRKCSH-210ENST00000589990 FBLL1A6NHQ2 334 aaKnown RBP8.32□□□□□ -1.08
PRKCSH-210ENST00000589990 RS1O15537 224 aa8.32□□□□□ -1.08
PRKCSH-210ENST00000589990 GATA1P15976 413 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms