RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 TIMM8BQ9Y5J9 83 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-208ENST00000589857 MUC21A0A0G2JKD1 596 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 MUC21A0A140T8X8 626 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 H0Y8G0 127 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 M0R381 172 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 DUSP14O95147 198 aaKnown RBP8.03□□□□□ -1.12
ZNF540-208ENST00000589857 FSHBP01225 129 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 IGHV4-59P01825 116 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 LGALS1P09382 135 aaKnown RBP8.03□□□□□ -1.12
ZNF540-208ENST00000589857 PRR31Q5SQ13 230 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 MUC21Q5SSG8 566 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 Q6YL49 198 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 LINC00173Q6ZV60 143 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 ZFAND2AQ8N6M9 145 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 C20orf173Q96LM9 149 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 AP1S3Q96PC3 154 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 C20orf78Q9BR46 151 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 DPH3P1Q9H4G8 78 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 SCRT2Q9NQ03 307 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 PHLDA3Q9Y5J5 127 aa8.03□□□□□ -1.12
ZNF540-208ENST00000589857 H3BVH4 76 aa8.02□□□□□ -1.13
ZNF540-208ENST00000589857 NCR2O95944 276 aa8.02□□□□□ -1.13
ZNF540-208ENST00000589857 AVPP01185 164 aa8.02□□□□□ -1.13
ZNF540-208ENST00000589857 PRB4P10163 310 aaPredicted RBP8.02□□□□□ -1.13
ZNF540-208ENST00000589857 COX8AP10176 69 aa8.02□□□□□ -1.13
ZNF540-208ENST00000589857 ORMDL2Q53FV1 153 aa8.02□□□□□ -1.13
ZNF540-208ENST00000589857 SHISA2Q6UWI4 295 aa8.02□□□□□ -1.13
ZNF540-208ENST00000589857 MYOZ3Q8TDC0 251 aa8.02□□□□□ -1.13
ZNF540-208ENST00000589857 C11orf21Q9P2W6 132 aa8.02□□□□□ -1.13
ZNF540-208ENST00000589857 A0A096LNJ9 63 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 hDV102S1A0JD36 115 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 SMKR1H3BMG3 65 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 SMIM17P0DL12 118 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 ZNF25P17030 456 aaPredicted RBP8.01□□□□□ -1.13
ZNF540-208ENST00000589857 RNASE4P34096 147 aaKnown RBP8.01□□□□□ -1.13
ZNF540-208ENST00000589857 HILS1P60008 231 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 LAGE3Q14657 143 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 MAJINQ3KP22 176 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 TMEM86BQ8N661 226 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 RNF152Q8N8N0 203 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 OR9G4Q8NGQ1 327 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 UBE2E2Q96LR5 201 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 MSRB1Q9NZV6 116 aa8.01□□□□□ -1.13
ZNF540-208ENST00000589857 KLLNB2CW77 178 aa8□□□□□ -1.13
ZNF540-208ENST00000589857 SIVA1O15304 175 aa8□□□□□ -1.13
ZNF540-208ENST00000589857 DLEU1O43261 78 aa8□□□□□ -1.13
ZNF540-208ENST00000589857 FAM159AQ6UWV7 190 aa8□□□□□ -1.13
ZNF540-208ENST00000589857 ZNF575Q86XF7 245 aa8□□□□□ -1.13
ZNF540-208ENST00000589857 ORAOV1Q8WV07 137 aa8□□□□□ -1.13
ZNF540-208ENST00000589857 TRAV2A0A0B4J234 112 aa7.99□□□□□ -1.13
ZNF540-208ENST00000589857 NXPH4O95158 308 aa7.99□□□□□ -1.13
ZNF540-208ENST00000589857 EVI2AP22794 236 aa7.99□□□□□ -1.13
ZNF540-208ENST00000589857 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-208ENST00000589857 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
ZNF540-208ENST00000589857 KIR3DS1Q14943 382 aa7.99□□□□□ -1.13
ZNF540-208ENST00000589857 ANXA2RQ3ZCQ2 193 aa7.99□□□□□ -1.13
ZNF540-208ENST00000589857 SYT8Q8NBV8 401 aa7.99□□□□□ -1.13
ZNF540-208ENST00000589857 ARHGAP32A7KAX9 2087 aa7.99□□□□□ -1.13
ZNF540-208ENST00000589857 C7orf71A4D174 169 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 PRSS1P07477 247 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 HLA-DRB4P13762 266 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 SEC11AP67812 179 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 PRR9Q5T870 116 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 Q6ZS46 218 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 Q8N2B8 174 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 NRACQ8N912 160 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 DCANP1Q8TF63 244 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 SMIM2Q9BVW6 85 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 ZNF702PQ9H963 129 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 PEMTQ9UBM1 199 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 HLA-DRB4X5D2U9 266 aa7.98□□□□□ -1.13
ZNF540-208ENST00000589857 SVEP1Q4LDE5 3571 aa7.97□□□□□ -1.13
ZNF540-208ENST00000589857 DPM2O94777 84 aa7.97□□□□□ -1.13
ZNF540-208ENST00000589857 PLNP26678 52 aa7.97□□□□□ -1.13
ZNF540-208ENST00000589857 FOXI2Q6ZQN5 318 aa7.97□□□□□ -1.13
ZNF540-208ENST00000589857 POM121L12Q8N7R1 296 aa7.97□□□□□ -1.13
ZNF540-208ENST00000589857 WFDC12Q8WWY7 111 aa7.97□□□□□ -1.13
ZNF540-208ENST00000589857 TMEM208Q9BTX3 173 aa7.97□□□□□ -1.13
ZNF540-208ENST00000589857 IGLV2-18A0A075B6J9 118 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 TRGV11A0A075B6L2 103 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 A0A0J9YX75 114 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 A6NDN8 102 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-208ENST00000589857 J3KRW8 73 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 K7EQG2 157 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 NUDT3O95989 172 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 IGKCP01834 107 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 SUMO2P61956 95 aaKnown RBP7.96□□□□□ -1.14
ZNF540-208ENST00000589857 TMEM95Q3KNT9 176 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 TMEM97Q5BJF2 176 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 LCNL1Q6ZST4 164 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 STPG4Q8N801 248 aa7.96□□□□□ -1.14
ZNF540-208ENST00000589857 IGKV3-7A0A075B6H7 116 aa7.95□□□□□ -1.14
ZNF540-208ENST00000589857 HOXA3O43365 443 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-208ENST00000589857 MGPP08493 103 aa7.95□□□□□ -1.14
ZNF540-208ENST00000589857 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-208ENST00000589857 HSD52Q0P140 79 aa7.95□□□□□ -1.14
ZNF540-208ENST00000589857 WFDC3Q8IUB2 231 aa7.95□□□□□ -1.14
ZNF540-208ENST00000589857 BOD1L2Q8IYS8 172 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms