RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 POM121L12Q8N7R1 296 aa14.34□□□□□ -0.11
PRKCSH-209ENST00000589838 RASL10AQ92737 203 aa14.34□□□□□ -0.11
PRKCSH-209ENST00000589838 FOXC2Q99958 501 aa14.34□□□□□ -0.11
PRKCSH-209ENST00000589838 DPM2O94777 84 aa14.33□□□□□ -0.11
PRKCSH-209ENST00000589838 IGKCP01834 107 aa14.33□□□□□ -0.11
PRKCSH-209ENST00000589838 Q8N2B8 174 aa14.33□□□□□ -0.11
PRKCSH-209ENST00000589838 TEX29Q8N6K0 151 aa14.33□□□□□ -0.11
PRKCSH-209ENST00000589838 CELSR1Q9NYQ6 3014 aa14.33□□□□□ -0.11
PRKCSH-209ENST00000589838 TRAV12-3A0A0B4J271 114 aa14.33□□□□□ -0.12
PRKCSH-209ENST00000589838 CD7P09564 240 aa14.32□□□□□ -0.12
PRKCSH-209ENST00000589838 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.31□□□□□ -0.12
PRKCSH-209ENST00000589838 SPRY2O43597 315 aa14.31□□□□□ -0.12
PRKCSH-209ENST00000589838 NPSP0C0P6 89 aa14.31□□□□□ -0.12
PRKCSH-209ENST00000589838 ZNF462Q96JM2 2506 aa14.31□□□□□ -0.12
PRKCSH-209ENST00000589838 VPS13CQ709C8 3753 aa14.31□□□□□ -0.12
PRKCSH-209ENST00000589838 TMEM97Q5BJF2 176 aa14.31□□□□□ -0.12
PRKCSH-209ENST00000589838 CDKN1BP46527 198 aa14.3□□□□□ -0.12
PRKCSH-209ENST00000589838 NMUP48645 174 aa14.3□□□□□ -0.12
PRKCSH-209ENST00000589838 SEC11AP67812 179 aa14.3□□□□□ -0.12
PRKCSH-209ENST00000589838 FOXI2Q6ZQN5 318 aa14.3□□□□□ -0.12
PRKCSH-209ENST00000589838 FAM208BQ5VWN6 2430 aa14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 RPL32P62910 135 aaKnown RBP14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 TOMM6Q96B49 74 aa14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 RPL39LQ96EH5 51 aaKnown RBP14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 HHLA3Q9XRX5 114 aa14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 KIF25-AS1Q9Y6Z4 181 aa14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 A0A087WX48 190 aa14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 TMEM86BQ8N661 226 aa14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 SYT8Q8NBV8 401 aa14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 WFDC12Q8WWY7 111 aa14.29□□□□□ -0.12
PRKCSH-209ENST00000589838 ZFHX3Q15911 3703 aa14.28□□□□□ -0.12
PRKCSH-209ENST00000589838 TRAV12-1A0A0B4J245 112 aa14.28□□□□□ -0.12
PRKCSH-209ENST00000589838 ZNF124Q15973 351 aa14.28□□□□□ -0.12
PRKCSH-209ENST00000589838 TCTEX1D4Q5JR98 221 aa14.28□□□□□ -0.12
PRKCSH-209ENST00000589838 UBR5O95071 2799 aaPredicted RBP14.28□□□□□ -0.12
PRKCSH-209ENST00000589838 CELSR2Q9HCU4 2923 aa14.28□□□□□ -0.12
PRKCSH-209ENST00000589838 LINC01549A6NIU2 74 aa14.27□□□□□ -0.12
PRKCSH-209ENST00000589838 HSD52Q0P140 79 aa14.27□□□□□ -0.12
PRKCSH-209ENST00000589838 SCGB3A1Q96QR1 104 aa14.27□□□□□ -0.12
PRKCSH-209ENST00000589838 PEMTQ9UBM1 199 aa14.27□□□□□ -0.12
PRKCSH-209ENST00000589838 UTP20O75691 2785 aaKnown RBP14.27□□□□□ -0.12
PRKCSH-209ENST00000589838 IGHV1OR15-1A0A075B7D0 117 aa14.27□□□□□ -0.13
PRKCSH-209ENST00000589838 IGHV3-16A0A0C4DH30 117 aa14.27□□□□□ -0.13
PRKCSH-209ENST00000589838 LINC01619G3V211 115 aa14.27□□□□□ -0.13
PRKCSH-209ENST00000589838 PLNP26678 52 aa14.27□□□□□ -0.13
PRKCSH-209ENST00000589838 C9orf85Q96MD7 179 aa14.27□□□□□ -0.13
PRKCSH-209ENST00000589838 DUX5Q96PT3 197 aa14.27□□□□□ -0.13
PRKCSH-209ENST00000589838 CRYBG3Q68DQ2 2970 aa14.27□□□□□ -0.13
PRKCSH-209ENST00000589838 MUC4Q99102 2169 aa14.26□□□□□ -0.13
PRKCSH-209ENST00000589838 TRAV2A0A0B4J234 112 aa14.26□□□□□ -0.13
PRKCSH-209ENST00000589838 TAX1BP3O14907 124 aa14.26□□□□□ -0.13
PRKCSH-209ENST00000589838 IGKV3-20P01619 116 aa14.26□□□□□ -0.13
PRKCSH-209ENST00000589838 HLA-DRB4P13762 266 aa14.26□□□□□ -0.13
PRKCSH-209ENST00000589838 LINC00315P59091 139 aa14.26□□□□□ -0.13
PRKCSH-209ENST00000589838 TMEM160Q9NX00 188 aa14.26□□□□□ -0.13
PRKCSH-209ENST00000589838 HLA-DRB4X5D2U9 266 aa14.26□□□□□ -0.13
PRKCSH-209ENST00000589838 H7C1H1 209 aa14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 PTTG1IPP53801 180 aa14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 UBE2V1Q13404 147 aa14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 CSTL1Q9H114 145 aa14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 MRPL35Q9NZE8 188 aaKnown RBP14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 A6NDN8 102 aa14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 KRTAP1-3Q8IUG1 177 aa14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 PCP2Q8IVA1 136 aa14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 C4orf3Q8WVX3 66 aa14.25□□□□□ -0.13
PRKCSH-209ENST00000589838 TRAV12-2A0A075B6T6 113 aa14.24□□□□□ -0.13
PRKCSH-209ENST00000589838 TCTAP57738 103 aa14.24□□□□□ -0.13
PRKCSH-209ENST00000589838 ZC2HC1BQ5TFG8 222 aa14.24□□□□□ -0.13
PRKCSH-209ENST00000589838 Q6ZVH6 145 aa14.24□□□□□ -0.13
PRKCSH-209ENST00000589838 USP9YO00507 2555 aaPredicted RBP14.24□□□□□ -0.13
PRKCSH-209ENST00000589838 MAP1AP78559 2803 aaPredicted RBP14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 SLURP1P55000 103 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 SPINK13Q1W4C9 94 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 C2orf66Q6UXQ4 117 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 HIGD1BQ9P298 99 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 TRGV11A0A075B6L2 103 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 F5H697 171 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 F8VRH5 84 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 VCYO14598 125 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 VAMP3Q15836 100 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 SUMO4Q6EEV6 95 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 GTSCR1Q86UQ5 136 aa14.23□□□□□ -0.13
PRKCSH-209ENST00000589838 FBN2P35556 2912 aa14.22□□□□□ -0.13
PRKCSH-209ENST00000589838 ADAMTSL5Q6ZMM2 481 aa14.22□□□□□ -0.13
PRKCSH-209ENST00000589838 ERASQ7Z444 233 aa14.22□□□□□ -0.13
PRKCSH-209ENST00000589838 Q8N1Y9 231 aa14.22□□□□□ -0.13
PRKCSH-209ENST00000589838 AMTNQ6UX39 209 aa14.21□□□□□ -0.13
PRKCSH-209ENST00000589838 OR11H1Q8NG94 326 aa14.21□□□□□ -0.13
PRKCSH-209ENST00000589838 MDFICQ9P1T7 246 aa14.21□□□□□ -0.13
PRKCSH-209ENST00000589838 CHTOPQ9Y3Y2 248 aaKnown RBP14.21□□□□□ -0.13
PRKCSH-209ENST00000589838 POLR2KP53803 58 aaKnown RBP14.21□□□□□ -0.14
PRKCSH-209ENST00000589838 NEXN-AS1Q8NBZ9 246 aa14.21□□□□□ -0.14
PRKCSH-209ENST00000589838 KIR2DL4Q99706 377 aa14.21□□□□□ -0.14
PRKCSH-209ENST00000589838 JPT2Q9H910 190 aa14.21□□□□□ -0.14
PRKCSH-209ENST00000589838 EPG5Q9HCE0 2579 aa14.2□□□□□ -0.14
PRKCSH-209ENST00000589838 LRRK2Q5S007 2527 aa14.2□□□□□ -0.14
PRKCSH-209ENST00000589838 DOPEY2Q9Y3R5 2298 aa14.2□□□□□ -0.14
PRKCSH-209ENST00000589838 A0A087WWL8 130 aa14.2□□□□□ -0.14
PRKCSH-209ENST00000589838 IGKV2D-26A0A0A0MRZ7 120 aa14.2□□□□□ -0.14
PRKCSH-209ENST00000589838 TRBV6-5A0A0K0K1A5 114 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms