RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 DIDO1Q9BTC0 2240 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-214ENST00000589677 WI2-2373I1.2A0A1W2PRP0 233 aa11.38□□□□□ -0.59
SMARCA4-214ENST00000589677 hADV29S1A0JD25 119 aa11.38□□□□□ -0.59
SMARCA4-214ENST00000589677 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
SMARCA4-214ENST00000589677 YLPM1P49750 1951 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-214ENST00000589677 NCOR1O75376 2440 aa11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 TNRC6AQ8NDV7 1962 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 HEATR1Q9H583 2144 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 H3BUA1 57 aa11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 LOXL1Q08397 574 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 MYO7BQ6PIF6 2116 aa11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 CRYGBP07316 175 aa11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 NBL1P41271 181 aa11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
SMARCA4-214ENST00000589677 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-214ENST00000589677 ANAPC1Q9H1A4 1944 aa11.36□□□□□ -0.59
SMARCA4-214ENST00000589677 INTS1Q8N201 2190 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-214ENST00000589677 JMJD7-PLA2G4BH0Y9G9 81 aa11.36□□□□□ -0.59
SMARCA4-214ENST00000589677 IGHV1-69P01742 117 aa11.36□□□□□ -0.59
SMARCA4-214ENST00000589677 IGLV11-55A0A075B6I3 123 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 TRAV25A0A0B4J276 109 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 H3BQ85 93 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 TICRRQ7Z2Z1 1910 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 IGKV2-29A2NJV5 120 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 LY6HO94772 140 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 NPBQ8NG41 125 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 CLEC2BQ92478 149 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 CRYGCP07315 174 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 MLST8Q9BVC4 326 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 SND1-IT1Q9HBX3 110 aa11.35□□□□□ -0.59
SMARCA4-214ENST00000589677 LY6G6EA0A0G2JKS1 128 aa11.34□□□□□ -0.59
SMARCA4-214ENST00000589677 C9orf47Q6ZRZ4 202 aa11.34□□□□□ -0.59
SMARCA4-214ENST00000589677 U3KQA8 63 aa11.34□□□□□ -0.59
SMARCA4-214ENST00000589677 BPESC1Q9GZL8 116 aa11.34□□□□□ -0.59
SMARCA4-214ENST00000589677 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
SMARCA4-214ENST00000589677 ZNF561-AS1K7EIQ3 104 aa11.33□□□□□ -0.6
SMARCA4-214ENST00000589677 DEFB130BP0DP73 79 aa11.33□□□□□ -0.6
SMARCA4-214ENST00000589677 DEFB130AP0DP74 79 aa11.33□□□□□ -0.6
SMARCA4-214ENST00000589677 BUB3O43684 328 aa11.33□□□□□ -0.6
SMARCA4-214ENST00000589677 C3orf22Q8N5N4 141 aa11.33□□□□□ -0.6
SMARCA4-214ENST00000589677 CTSGP08311 255 aa11.33□□□□□ -0.6
SMARCA4-214ENST00000589677 RPL39P62891 51 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-214ENST00000589677 IGLV2-23P01705 113 aa11.32□□□□□ -0.6
SMARCA4-214ENST00000589677 LINC00322Q6ZN03 302 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-214ENST00000589677 AKAP6Q13023 2319 aa11.32□□□□□ -0.6
SMARCA4-214ENST00000589677 RUSC1-AS1Q66K80 236 aa11.32□□□□□ -0.6
SMARCA4-214ENST00000589677 COL4A3Q01955 1670 aa11.32□□□□□ -0.6
SMARCA4-214ENST00000589677 LINC01619G3V211 115 aa11.32□□□□□ -0.6
SMARCA4-214ENST00000589677 PLXNB3Q9ULL4 1909 aa11.31□□□□□ -0.6
SMARCA4-214ENST00000589677 SPRY2O43597 315 aa11.31□□□□□ -0.6
SMARCA4-214ENST00000589677 C2orf91Q6ZV80 131 aa11.31□□□□□ -0.6
SMARCA4-214ENST00000589677 CTSZQ9UBR2 303 aa11.31□□□□□ -0.6
SMARCA4-214ENST00000589677 IGHV1-58A0A0C4DH39 117 aa11.31□□□□□ -0.6
SMARCA4-214ENST00000589677 C11orf44Q8N8P7 122 aa11.31□□□□□ -0.6
SMARCA4-214ENST00000589677 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-214ENST00000589677 MRPL36Q9P0J6 103 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-214ENST00000589677 NKAPP1Q8N9T2 125 aa11.3□□□□□ -0.6
SMARCA4-214ENST00000589677 EML6Q6ZMW3 1958 aa11.3□□□□□ -0.6
SMARCA4-214ENST00000589677 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
SMARCA4-214ENST00000589677 TEX22C9J3V5 150 aa11.3□□□□□ -0.6
SMARCA4-214ENST00000589677 GATA3P23771 443 aa11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 Q6ZPA2 131 aa11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 RITA1Q96K30 269 aa11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 PRAC2D3DTV9 90 aa11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 CFHR3Q02985 330 aa11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 TMEM61Q8N0U2 210 aa11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 OPRPNQ99935 248 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 TEX49A0A1B0GTD5 131 aa11.29□□□□□ -0.6
SMARCA4-214ENST00000589677 P0DMU3 169 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 MIAQ16674 131 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 WNK2Q9Y3S1 2297 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 CRIP3Q6Q6R5 217 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 GPR179Q6PRD1 2367 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 IGLC6P0CF74 106 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 CACNA1BQ00975 2339 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 NSUN5P1Q3KNT7 163 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 U3KQK5 164 aa11.28□□□□□ -0.6
SMARCA4-214ENST00000589677 TRAV4A0A0B4J268 109 aa11.27□□□□□ -0.6
SMARCA4-214ENST00000589677 IGFL3Q6UXB1 125 aa11.27□□□□□ -0.6
SMARCA4-214ENST00000589677 OBSL1O75147 1896 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 PLA2G5P39877 138 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 NEXN-AS1Q8NBZ9 246 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 BRWD1-AS2P59051 145 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 PRSS33Q8NF86 280 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 RNF152Q8N8N0 203 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 COX7B2Q8TF08 81 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 NOTCH4Q99466 2003 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 IMUPQ9GZP8 106 aa11.27□□□□□ -0.61
SMARCA4-214ENST00000589677 IGHV3-30-3P0DP02 117 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 DAND5Q8N907 189 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 U3KQE9 123 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 E7EUB6 86 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 LECT2O14960 151 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 SPRNQ5BIV9 151 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms