RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	TRAV26-1	A0A087WT03	109 aa		11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	HBD	P02042	147 aa		11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	CSN3	P07498	182 aa		11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	LGALS1	P09382	135 aa	Known RBP	11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	PRB4	P10163	310 aa	Predicted RBP	11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318		Q71RC1	249 aa	Predicted RBP	11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	GPHB5	Q86YW7	130 aa		11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	OR8A1	Q8NGG7	326 aa		11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	WFDC12	Q8WWY7	111 aa		11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	NAA38	Q9BRA0	125 aa	Known RBP	11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	AAMDC	Q9H7C9	122 aa		11.69	□□□□□ -0.54
DDX39A-209	ENST00000589318	OR11H12	B2RN74	326 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	RNASE1	P07998	156 aa	Known RBP	11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	SRD5A1	P18405	259 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	HLA-DMB	P28068	263 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	CFAP161	Q6P656	301 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318		Q86TA4	180 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	OR11H1	Q8NG94	326 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	OR11H2	Q8NH07	326 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	ATP6V0E2	Q8NHE4	81 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	GEMIN7	Q9H840	131 aa	Known RBP	11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318		U3KQK5	164 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	FBLL1	A6NHQ2	334 aa	Known RBP	11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	ZNF785	A8K8V0	405 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	TM4SF20	Q53R12	229 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	IGFL4	Q6B9Z1	124 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	VCX2	Q9H322	139 aa		11.68	□□□□□ -0.54
DDX39A-209	ENST00000589318	CACNG7	P62955	275 aa		11.67	□□□□□ -0.54
DDX39A-209	ENST00000589318	TMEM75	Q8N9X5	138 aa		11.67	□□□□□ -0.54
DDX39A-209	ENST00000589318	ZNF418	Q8TF45	676 aa	Predicted RBP	11.67	□□□□□ -0.54
DDX39A-209	ENST00000589318	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.67	□□□□□ -0.54
DDX39A-209	ENST00000589318	DAZ1	Q9NQZ3	744 aa	Known RBP	11.67	□□□□□ -0.54
DDX39A-209	ENST00000589318	HIVEP1	P15822	2718 aa		11.67	□□□□□ -0.54
DDX39A-209	ENST00000589318		K7EMT4	169 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	EDN2	P20800	178 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	C18orf65	Q6ZTR6	163 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	IFI27L1	Q96BM0	104 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	CYSLTR1	Q9Y271	337 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	IGHV4OR15-8	A0A075B7B6	117 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318		A0A087WW49	117 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318		A0A096LNJ9	63 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	TRAV8-2	A0A0B4J237	113 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	IGHV7-4-1	A0A0J9YVY3	117 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	GCSH	P23434	173 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	NMU	P48645	174 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	HILS1	P60008	231 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	FAM106A	Q4KMX7	169 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	C8orf86	Q6ZUL3	223 aa		11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	SPAG8	Q99932	426 aa	Predicted RBP	11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.66	□□□□□ -0.54
DDX39A-209	ENST00000589318	SLC50A1	Q9BRV3	221 aa		11.65	□□□□□ -0.54
DDX39A-209	ENST00000589318	NSD1	Q96L73	2696 aa	Predicted RBP	11.65	□□□□□ -0.55
DDX39A-209	ENST00000589318	TSPAN13	O95857	204 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	GAGE13	Q4V321	117 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	PRNT	Q86SH4	94 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	CEND1	Q8N111	149 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	RNF182	Q8N6D2	247 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	CHAC1	Q9BUX1	264 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	RHPN1-AS1	Q9BWJ2	59 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	PSG8	Q9UQ74	426 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	TMEM213	A2RRL7	107 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	IGKV2D-40	P01614	121 aa	Predicted RBP	11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	IFI27	P40305	119 aa	Predicted RBP	11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	ORMDL3	Q8N138	153 aa		11.64	□□□□□ -0.55
DDX39A-209	ENST00000589318	SERTM2	A0A1B0GWG4	89 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	IGLL5	B9A064	214 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	FXYD2	P54710	66 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	WFDC2	Q14508	124 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	PCP2	Q8IVA1	136 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	ZNF479	Q96JC4	524 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	ASCL2	Q99929	193 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	C16orf95	Q9H693	158 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	ZMAT4	Q9H898	229 aa		11.63	□□□□□ -0.55
DDX39A-209	ENST00000589318	PRAC2	D3DTV9	90 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	SOCS3	O14543	225 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	EVI2A	P22794	236 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	HOXD3	P31249	432 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	UFC1	Q9Y3C8	167 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	LGALS9	O00182	355 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	DEFB136	Q30KP8	78 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	HIST2H2BD	Q6DRA6	164 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	LINC01006	Q8NI28	216 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	C4orf3	Q8WVX3	66 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	PRELID3A	Q96N28	172 aa		11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	FLNB	O75369	2602 aa	Known RBP	11.62	□□□□□ -0.55
DDX39A-209	ENST00000589318	ARMS2	P0C7Q2	107 aa		11.61	□□□□□ -0.55
DDX39A-209	ENST00000589318	SYNJ2BP	P57105	145 aa		11.61	□□□□□ -0.55
DDX39A-209	ENST00000589318	MRPL53	Q96EL3	112 aa	Known RBP	11.61	□□□□□ -0.55
DDX39A-209	ENST00000589318	LINC01546	A6NGU7	62 aa		11.6	□□□□□ -0.55
DDX39A-209	ENST00000589318	INAFM1	C9JVW0	142 aa		11.6	□□□□□ -0.55
DDX39A-209	ENST00000589318	LINC01619	G3V211	115 aa		11.6	□□□□□ -0.55
DDX39A-209	ENST00000589318	FAM104B	Q5XKR9	115 aa		11.6	□□□□□ -0.55
DDX39A-209	ENST00000589318	SELENOK	Q9Y6D0	94 aa		11.6	□□□□□ -0.55
DDX39A-209	ENST00000589318	ETDB	Q3ZM63	59 aa		11.6	□□□□□ -0.55
DDX39A-209	ENST00000589318	C20orf173	Q96LM9	149 aa		11.6	□□□□□ -0.55
DDX39A-209	ENST00000589318	NHP2	Q9NX24	153 aa	Known RBP	11.6	□□□□□ -0.55
DDX39A-209	ENST00000589318	FN1	P02751	2386 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms