RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 EIF3AQ14152 1382 aaKnown RBP0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 STAB2Q8WWQ8 2551 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 MED13LQ71F56 2210 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 CDK5RAP2Q96SN8 1893 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 TANC1Q9C0D5 1861 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 FAT1Q14517 4588 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 LRP2P98164 4655 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 APC2O95996 2303 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 TSC2P49815 1807 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 ZNF236Q9UL36 1845 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 FAT3Q8TDW7 4589 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 TRBV6-4A0A1B0GX49 114 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 DUXBA0A1W2PPF3 345 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 E7EUB6 86 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 AIPO00170 330 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 NUPR1O60356 82 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 NDUFC2O95298 119 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 ZNF25P17030 456 aaPredicted RBP0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 DYNLT3P51808 116 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 GNG5P63218 68 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 MYL5Q02045 173 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 ZNF833PQ6ZTB9 187 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 GRINAQ7Z429 371 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 ST6GALNAC3Q8NDV1 305 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 CEP19Q96LK0 163 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 SH3BGRL3Q9H299 93 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 LYRM2Q9NU23 88 aaPredicted RBP0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 MED29Q9NX70 200 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 VPS8Q8N3P4 1428 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 ARAP2Q8WZ64 1704 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 NUP210LQ5VU65 1888 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 CHD3Q12873 2000 aaKnown RBP0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 MED12Q93074 2177 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 DNAH8Q96JB1 4490 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 MYH10P35580 1976 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 TNRC6AQ8NDV7 1962 aaKnown RBP0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 TET1Q8NFU7 2136 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 URB1O60287 2271 aaKnown RBP0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 LPAP08519 4548 aa0.43□□□□□ -2.34
HMGN1P30-201ENST00000589286 SPTBN1Q01082 2364 aaKnown RBP0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 SSPOA2VEC9 5147 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 DOCK1Q14185 1865 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 AHCTF1Q8WYP5 2266 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 IGHV1-58A0A0C4DH39 117 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 H7C1C5 153 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 CST8O60676 142 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 ATG12O94817 140 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 IFNA1P01562 189 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 IGLV1-51P01701 117 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 CRHP06850 196 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 COX6B1P14854 86 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 INSL3P51460 131 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 LCN6P62502 163 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 RPL19P84098 196 aaKnown RBP0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 SCGB2B2Q4G0G5 96 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 SPRNQ5BIV9 151 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 C1orf134Q5TEV5 83 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 EIF5AL1Q6IS14 154 aaKnown RBP0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 C4orf22Q6V702 233 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 LYG2Q86SG7 212 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 LINC00052Q96N35 136 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 TP53RKQ96S44 253 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 LYSMD1Q96S90 227 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 CCDC94Q9BW85 323 aaPredicted RBP0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 NPCDR1Q9BY65 106 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 PBOV1Q9GZY1 135 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 PCTPQ9UKL6 214 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 GINS2Q9Y248 185 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 ASB4Q9Y574 426 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 LY96Q9Y6Y9 160 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 LRP1Q07954 4544 aaKnown RBP0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 USH2AO75445 5202 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 NUP98P52948 1817 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 NBASA2RRP1 2371 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 LAMB1P07942 1786 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 UBR2Q8IWV8 1755 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 FANCMQ8IYD8 2048 aa0.42□□□□□ -2.34
HMGN1P30-201ENST00000589286 ECM29Q5VYK3 1845 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 DOCK2Q92608 1830 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 CSPG4Q6UVK1 2322 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 CNTRLQ7Z7A1 2325 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 GPR98Q8WXG9 6306 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 HELZP42694 1942 aaKnown RBP0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 MUC17Q685J3 4493 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 TRAV10A0A0B4J240 114 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 TLCD2A6NGC4 264 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 G3V2T6 193 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 TRGC2P03986 189 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 NFYBP25208 207 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 CD52P31358 61 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 PHBP35232 272 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 BASP1P80723 227 aaKnown RBP0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 PSG9Q00887 426 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 POU6F1Q14863 301 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 DEFB109BQ30KR1 87 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 FAM74A1Q5RGS3 127 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 AKR1C8PQ5T2L2 129 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 C2orf82Q6UX34 121 aa0.41□□□□□ -2.34
HMGN1P30-201ENST00000589286 LINC00322Q6ZN03 302 aaPredicted RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms