RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 MLST8Q9BVC4 326 aa18.28■□□□□ 0.52
RFX1-205ENST00000589239 MGAM2Q2M2H8 2515 aa18.28■□□□□ 0.52
RFX1-205ENST00000589239 DEFB125Q8N687 156 aa18.28■□□□□ 0.52
RFX1-205ENST00000589239 DUSP14O95147 198 aaKnown RBP18.27■□□□□ 0.52
RFX1-205ENST00000589239 MGST1P10620 155 aaKnown RBP18.27■□□□□ 0.52
RFX1-205ENST00000589239 EGFEM1PQ0D2K5 195 aa18.27■□□□□ 0.52
RFX1-205ENST00000589239 SAMD5Q5TGI4 173 aa18.26■□□□□ 0.51
RFX1-205ENST00000589239 NDFIP1Q9BT67 221 aa18.26■□□□□ 0.51
RFX1-205ENST00000589239 STHQ8IWL8 128 aa18.26■□□□□ 0.51
RFX1-205ENST00000589239 J3KRW8 73 aa18.25■□□□□ 0.51
RFX1-205ENST00000589239 SPINK4O60575 86 aa18.25■□□□□ 0.51
RFX1-205ENST00000589239 ZC2HC1AQ96GY0 325 aa18.25■□□□□ 0.51
RFX1-205ENST00000589239 FAM19A4Q96LR4 140 aa18.25■□□□□ 0.51
RFX1-205ENST00000589239 TRAV9-2A0A087WT02 112 aa18.25■□□□□ 0.51
RFX1-205ENST00000589239 SMIM27A0A1W2PRY6 76 aa18.25■□□□□ 0.51
RFX1-205ENST00000589239 RBMY1BA6NDE4 496 aaKnown RBP18.25■□□□□ 0.51
RFX1-205ENST00000589239 RBMY1EA6NEQ0 496 aaKnown RBP18.25■□□□□ 0.51
RFX1-205ENST00000589239 RBMY1DP0C7P1 496 aaKnown RBP18.25■□□□□ 0.51
RFX1-205ENST00000589239 PRR27Q6MZM9 219 aa18.24■□□□□ 0.51
RFX1-205ENST00000589239 AMTNQ6UX39 209 aa18.24■□□□□ 0.51
RFX1-205ENST00000589239 Q8N1Y9 231 aa18.24■□□□□ 0.51
RFX1-205ENST00000589239 FAM19A2Q8N3H0 131 aa18.24■□□□□ 0.51
RFX1-205ENST00000589239 OR4C5Q8NGB2 326 aa18.24■□□□□ 0.51
RFX1-205ENST00000589239 SMIM12Q96EX1 92 aa18.24■□□□□ 0.51
RFX1-205ENST00000589239 RNASE7Q9H1E1 156 aaKnown RBP18.24■□□□□ 0.51
RFX1-205ENST00000589239 APCSP02743 223 aa18.23■□□□□ 0.51
RFX1-205ENST00000589239 KIR3DS1Q14943 382 aa18.23■□□□□ 0.51
RFX1-205ENST00000589239 Q6ZVH6 145 aa18.23■□□□□ 0.51
RFX1-205ENST00000589239 LENEPQ9Y5L5 61 aa18.23■□□□□ 0.51
RFX1-205ENST00000589239 NOTCH1P46531 2555 aa18.23■□□□□ 0.51
RFX1-205ENST00000589239 PPBPP02775 128 aa18.23■□□□□ 0.51
RFX1-205ENST00000589239 DNAH3Q8TD57 4116 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 A8MTW9 85 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 NTF3P20783 257 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 PRR9Q5T870 116 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 TRPT1Q86TN4 253 aaKnown RBP18.22■□□□□ 0.51
RFX1-205ENST00000589239 ATOH7Q8N100 152 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 ZFAND2AQ8N6M9 145 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 M0R2Z0 102 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 FXYD7P58549 80 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 SPINK13Q1W4C9 94 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 MAJINQ3KP22 176 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 RASL11AQ6T310 242 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 LINC00322Q6ZN03 302 aaPredicted RBP18.22■□□□□ 0.51
RFX1-205ENST00000589239 C18orf32Q8TCD1 76 aa18.22■□□□□ 0.51
RFX1-205ENST00000589239 NBEAL1Q6ZS30 2694 aa18.21■□□□□ 0.51
RFX1-205ENST00000589239 CRIP1P50238 77 aa18.21■□□□□ 0.51
RFX1-205ENST00000589239 ZNF80P51504 273 aaPredicted RBP18.21■□□□□ 0.51
RFX1-205ENST00000589239 RPS20P60866 119 aaKnown RBP18.21■□□□□ 0.51
RFX1-205ENST00000589239 MRPL54Q6P161 138 aaKnown RBP18.21■□□□□ 0.51
RFX1-205ENST00000589239 ODF3Q96PU9 254 aa18.21■□□□□ 0.51
RFX1-205ENST00000589239 TCL1AP56279 114 aa18.2■□□□□ 0.5
RFX1-205ENST00000589239 COX8CQ7Z4L0 72 aa18.2■□□□□ 0.5
RFX1-205ENST00000589239 IBA57Q5T440 356 aaKnown RBP18.2■□□□□ 0.5
RFX1-205ENST00000589239 TRAV12-2A0A075B6T6 113 aa18.19■□□□□ 0.5
RFX1-205ENST00000589239 TRBV7-9A0A0J9YWB2 115 aa18.19■□□□□ 0.5
RFX1-205ENST00000589239 RPL35AP18077 110 aaKnown RBP18.19■□□□□ 0.5
RFX1-205ENST00000589239 Q6ZQT7 251 aa18.19■□□□□ 0.5
RFX1-205ENST00000589239 KLLNB2CW77 178 aa18.17■□□□□ 0.5
RFX1-205ENST00000589239 LEPP41159 167 aa18.17■□□□□ 0.5
RFX1-205ENST00000589239 CLUHP3Q96NS8 147 aa18.17■□□□□ 0.5
RFX1-205ENST00000589239 HSBP1O75506 76 aa18.17■□□□□ 0.5
RFX1-205ENST00000589239 RNASE4P34096 147 aaKnown RBP18.17■□□□□ 0.5
RFX1-205ENST00000589239 SLAQ13239 276 aa18.17■□□□□ 0.5
RFX1-205ENST00000589239 RNF151Q2KHN1 245 aa18.16■□□□□ 0.5
RFX1-205ENST00000589239 FAM162BQ5T6X4 162 aa18.16■□□□□ 0.5
RFX1-205ENST00000589239 VAMP3Q15836 100 aa18.15■□□□□ 0.5
RFX1-205ENST00000589239 SH2D1AO60880 128 aa18.14■□□□□ 0.5
RFX1-205ENST00000589239 SMIM15Q7Z3B0 74 aa18.14■□□□□ 0.5
RFX1-205ENST00000589239 C19orf71A6NCJ1 209 aa18.14■□□□□ 0.49
RFX1-205ENST00000589239 CRXO43186 299 aaPredicted RBP18.14■□□□□ 0.49
RFX1-205ENST00000589239 NUDT10Q8NFP7 164 aa18.14■□□□□ 0.49
RFX1-205ENST00000589239 NUDT11Q96G61 164 aa18.14■□□□□ 0.49
RFX1-205ENST00000589239 DAZAP1Q96EP5 407 aaKnown RBP18.13■□□□□ 0.49
RFX1-205ENST00000589239 TRAV12-3A0A0B4J271 114 aa18.13■□□□□ 0.49
RFX1-205ENST00000589239 XCL2Q9UBD3 114 aa18.13■□□□□ 0.49
RFX1-205ENST00000589239 FABP5P3A8MUU1 101 aa18.12■□□□□ 0.49
RFX1-205ENST00000589239 IGHV4-30-4P0DP06 118 aa18.12■□□□□ 0.49
RFX1-205ENST00000589239 C7orf71A4D174 169 aa18.11■□□□□ 0.49
RFX1-205ENST00000589239 ST20Q9HBF5 79 aa18.11■□□□□ 0.49
RFX1-205ENST00000589239 Q6AWC8 147 aa18.11■□□□□ 0.49
RFX1-205ENST00000589239 FAM231DQ6ZW35 169 aa18.11■□□□□ 0.49
RFX1-205ENST00000589239 P01737 135 aa18.1■□□□□ 0.49
RFX1-205ENST00000589239 PRB2P02812 416 aaPredicted RBP18.1■□□□□ 0.49
RFX1-205ENST00000589239 GIG44P09565 113 aaPredicted RBP18.1■□□□□ 0.49
RFX1-205ENST00000589239 C11orf21Q9P2W6 132 aa18.1■□□□□ 0.49
RFX1-205ENST00000589239 TRAV21A0A0B4J279 112 aa18.1■□□□□ 0.49
RFX1-205ENST00000589239 RBMY1A1P0DJD3 496 aaKnown RBP18.1■□□□□ 0.49
RFX1-205ENST00000589239 RBMY1CP0DJD4 496 aa18.1■□□□□ 0.49
RFX1-205ENST00000589239 RBMY1FQ15415 496 aaKnown RBP18.1■□□□□ 0.49
RFX1-205ENST00000589239 CST9LQ9H4G1 147 aa18.1■□□□□ 0.49
RFX1-205ENST00000589239 CA1P00915 261 aaPredicted RBP18.09■□□□□ 0.49
RFX1-205ENST00000589239 KPRPQ5T749 579 aaPredicted RBP18.09■□□□□ 0.49
RFX1-205ENST00000589239 TMEM70Q9BUB7 260 aa18.09■□□□□ 0.49
RFX1-205ENST00000589239 LOC102724200A0A096LPH7 203 aaPredicted RBP18.08■□□□□ 0.49
RFX1-205ENST00000589239 TAX1BP3O14907 124 aa18.08■□□□□ 0.49
RFX1-205ENST00000589239 OCIAD2Q56VL3 154 aa18.08■□□□□ 0.49
RFX1-205ENST00000589239 RNASEKQ6P5S7 137 aaKnown RBP18.08■□□□□ 0.49
RFX1-205ENST00000589239 ORM1P02763 201 aa18.07■□□□□ 0.48
RFX1-205ENST00000589239 MUC21Q5SSG8 566 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms