RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TAX1BP3O14907 124 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 CCL25O15444 150 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 TGFAP01135 160 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 COX6B1P14854 86 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 PSMB8P28062 276 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 ANXA2RQ3ZCQ2 193 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 C2orf91Q6ZV80 131 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 FAM19A4Q96LR4 140 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 SMIM2Q9BVW6 85 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 ASH1LQ9NR48 2969 aaKnown RBP5.58□□□□□ -1.52
ZNF540-206ENST00000589117 AKAP6Q13023 2319 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 FGF6P10767 208 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 PEMTQ9UBM1 199 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 CBY1Q9Y3M2 126 aa5.58□□□□□ -1.52
ZNF540-206ENST00000589117 TRAV26-2A0A0B4J265 109 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 CBY3A6NI87 242 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 H7C1H1 209 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 GAS8-AS1O95177 125 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 HLA-DRB4P13762 266 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 DEFB112Q30KQ8 113 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 PRR9Q5T870 116 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 GTF2H5Q6ZYL4 71 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 C14orf178Q8N769 122 aaPredicted RBP5.57□□□□□ -1.52
ZNF540-206ENST00000589117 ODF3Q96PU9 254 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 HIGD1BQ9P298 99 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.57□□□□□ -1.52
ZNF540-206ENST00000589117 HLA-DRB4X5D2U9 266 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 ITPR1Q14643 2758 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 A0A087WX48 190 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 TRAV12-1A0A0B4J245 112 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 KLLNB2CW77 178 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 H3BRM9 83 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 IGHV4-59P01825 116 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 MGPP08493 103 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 SCGB3A1Q96QR1 104 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 HHLA3Q9XRX5 114 aa5.57□□□□□ -1.52
ZNF540-206ENST00000589117 GAGE10A6NGK3 116 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 C9orf118A6NHY6 69 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 DUSP14O95147 198 aaKnown RBP5.56□□□□□ -1.52
ZNF540-206ENST00000589117 ZC2HC1BQ5TFG8 222 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 LCNL1Q6ZST4 164 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 SYT8Q8NBV8 401 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 TOMM6Q96B49 74 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 TP73-AS1Q9UF72 201 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 CSMD1Q96PZ7 3565 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 F6UB75 175 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 LGALS9O00182 355 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 GNRH2O43555 120 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 DCANP1Q8TF63 244 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 KIR2DL4Q99706 377 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 VPREB3Q9UKI3 123 aa5.56□□□□□ -1.52
ZNF540-206ENST00000589117 F8VRH5 84 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 K7EP13 123 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 NXPH4O95158 308 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 CD7P09564 240 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 SMIM13P0DJ93 91 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 SRD5A1P18405 259 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 RPL32P62910 135 aaKnown RBP5.55□□□□□ -1.52
ZNF540-206ENST00000589117 ADAMTSL5Q6ZMM2 481 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 Q6ZQT7 251 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 Q6ZVH6 145 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 PCP2Q8IVA1 136 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 RASL10AQ92737 203 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 UBE2E2Q96LR5 201 aa5.55□□□□□ -1.52
ZNF540-206ENST00000589117 MRPL35Q9NZE8 188 aaKnown RBP5.55□□□□□ -1.52
ZNF540-206ENST00000589117 SPTAN1Q13813 2472 aaKnown RBP5.55□□□□□ -1.52
ZNF540-206ENST00000589117 IGHV4OR15-8A0A075B7B6 117 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 A0A087WW49 117 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 VCYO14598 125 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 LGALS1P09382 135 aaKnown RBP5.54□□□□□ -1.52
ZNF540-206ENST00000589117 RNASE3P12724 160 aaKnown RBP5.54□□□□□ -1.52
ZNF540-206ENST00000589117 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 ERASQ7Z444 233 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 POM121L12Q8N7R1 296 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 TRAV12-3A0A0B4J271 114 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 CDKN1BP46527 198 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 PCP4P48539 62 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 TCTAP57738 103 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 TAL2Q16559 108 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 C2orf66Q6UXQ4 117 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 Q6YL49 198 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 GTSCR1Q86UQ5 136 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 CSTL1Q9H114 145 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 CYSLTR1Q9Y271 337 aa5.54□□□□□ -1.52
ZNF540-206ENST00000589117 CHTOPQ9Y3Y2 248 aaKnown RBP5.54□□□□□ -1.52
ZNF540-206ENST00000589117 SVEP1Q4LDE5 3571 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 PKD1L2Q7Z442 2459 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 A0A0J9YX75 114 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 TRIAP1O43715 76 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 ZNF688P0C7X2 276 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 TEX29Q8N6K0 151 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 TRBV25-1A0A075B6N4 114 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 TRAV8-6A0A0B4J262 113 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 OR11H12B2RN74 326 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 K7EQG2 157 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 SYNJ2BPP57105 145 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 DEFB1P60022 68 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 OR11H1Q8NG94 326 aa5.53□□□□□ -1.52
ZNF540-206ENST00000589117 OR11H2Q8NH07 326 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms