RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ARMS2P0C7Q2 107 aa13.89□□□□□ -0.19
CIRBP-220ENST00000588917 MED14OSP0DP75 135 aa13.89□□□□□ -0.19
CIRBP-220ENST00000588917 ZNF876PQ49A33 203 aa13.89□□□□□ -0.19
CIRBP-220ENST00000588917 PIK3CD-AS1Q5SR53 167 aa13.89□□□□□ -0.19
CIRBP-220ENST00000588917 RYR2Q92736 4967 aa13.89□□□□□ -0.19
CIRBP-220ENST00000588917 SFTA3P0C7M3 94 aa13.88□□□□□ -0.19
CIRBP-220ENST00000588917 ERVFC1-1P60608 527 aa13.88□□□□□ -0.19
CIRBP-220ENST00000588917 PHLDA3Q9Y5J5 127 aa13.88□□□□□ -0.19
CIRBP-220ENST00000588917 DYNC2H1Q8NCM8 4307 aaKnown RBP13.87□□□□□ -0.19
CIRBP-220ENST00000588917 LCE6AA0A183 80 aa13.87□□□□□ -0.19
CIRBP-220ENST00000588917 RPL19P84098 196 aaKnown RBP13.87□□□□□ -0.19
CIRBP-220ENST00000588917 ZNF575Q86XF7 245 aa13.87□□□□□ -0.19
CIRBP-220ENST00000588917 SYT8Q8NBV8 401 aa13.87□□□□□ -0.19
CIRBP-220ENST00000588917 RNASE7Q9H1E1 156 aaKnown RBP13.87□□□□□ -0.19
CIRBP-220ENST00000588917 RPP21Q9H633 154 aaKnown RBP13.87□□□□□ -0.19
CIRBP-220ENST00000588917 MRPL16Q9NX20 251 aaKnown RBP13.87□□□□□ -0.19
CIRBP-220ENST00000588917 H3BVH4 76 aa13.86□□□□□ -0.19
CIRBP-220ENST00000588917 GATCO43716 136 aaKnown RBP13.86□□□□□ -0.19
CIRBP-220ENST00000588917 CIDEAO60543 219 aa13.86□□□□□ -0.19
CIRBP-220ENST00000588917 RPL23P62829 140 aaKnown RBP13.86□□□□□ -0.19
CIRBP-220ENST00000588917 ZFAND6Q6FIF0 208 aa13.86□□□□□ -0.19
CIRBP-220ENST00000588917 COMMD7Q86VX2 200 aa13.86□□□□□ -0.19
CIRBP-220ENST00000588917 C15orf54Q8N8G6 183 aa13.86□□□□□ -0.19
CIRBP-220ENST00000588917 FAM210BQ96KR6 192 aa13.86□□□□□ -0.19
CIRBP-220ENST00000588917 SCRT2Q9NQ03 307 aa13.86□□□□□ -0.19
CIRBP-220ENST00000588917 OSTCQ9NRP0 149 aa13.86□□□□□ -0.19
CIRBP-220ENST00000588917 A0A1W2PPQ1 181 aa13.85□□□□□ -0.19
CIRBP-220ENST00000588917 OR5AL1P0C617 328 aa13.85□□□□□ -0.19
CIRBP-220ENST00000588917 HTN3P15516 51 aa13.85□□□□□ -0.19
CIRBP-220ENST00000588917 TCTAP57738 103 aa13.85□□□□□ -0.19
CIRBP-220ENST00000588917 SSBP4Q9BWG4 385 aaPredicted RBP13.85□□□□□ -0.19
CIRBP-220ENST00000588917 A8MWL6 223 aa13.84□□□□□ -0.19
CIRBP-220ENST00000588917 F2Z2F3 143 aa13.84□□□□□ -0.19
CIRBP-220ENST00000588917 SLAQ13239 276 aa13.84□□□□□ -0.19
CIRBP-220ENST00000588917 ADIRFQ15847 76 aa13.84□□□□□ -0.19
CIRBP-220ENST00000588917 TRAV4A0A0B4J268 109 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 TMEM218A2RU14 115 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 A8MWV9 139 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 F5H768 121 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 SNAI2O43623 268 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 PNRC1Q12796 327 aaPredicted RBP13.83□□□□□ -0.2
CIRBP-220ENST00000588917 CT83Q5H943 113 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 ZFP82Q8N141 532 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 OR4C5Q8NGB2 326 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 ISOC2Q96AB3 205 aa13.83□□□□□ -0.2
CIRBP-220ENST00000588917 FER1L6-AS1Q8NA97 138 aa13.82□□□□□ -0.2
CIRBP-220ENST00000588917 SFRP2Q96HF1 295 aa13.82□□□□□ -0.2
CIRBP-220ENST00000588917 IGLL5B9A064 214 aa13.81□□□□□ -0.2
CIRBP-220ENST00000588917 SPANXN1Q5VSR9 72 aa13.81□□□□□ -0.2
CIRBP-220ENST00000588917 OR10G8Q8NGN5 311 aa13.81□□□□□ -0.2
CIRBP-220ENST00000588917 SACSQ9NZJ4 4579 aa13.8□□□□□ -0.2
CIRBP-220ENST00000588917 CSMD3Q7Z407 3707 aa13.8□□□□□ -0.2
CIRBP-220ENST00000588917 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
CIRBP-220ENST00000588917 F8W036 122 aa13.8□□□□□ -0.2
CIRBP-220ENST00000588917 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
CIRBP-220ENST00000588917 CACNG7P62955 275 aa13.8□□□□□ -0.2
CIRBP-220ENST00000588917 DMRTA1Q5VZB9 504 aa13.8□□□□□ -0.2
CIRBP-220ENST00000588917 WDR73Q6P4I2 378 aa13.8□□□□□ -0.2
CIRBP-220ENST00000588917 M0R381 172 aa13.79□□□□□ -0.2
CIRBP-220ENST00000588917 RS1O15537 224 aa13.79□□□□□ -0.2
CIRBP-220ENST00000588917 GZMBP10144 247 aa13.79□□□□□ -0.2
CIRBP-220ENST00000588917 TPPP3Q9BW30 176 aa13.79□□□□□ -0.2
CIRBP-220ENST00000588917 SEC11CQ9BY50 192 aa13.79□□□□□ -0.2
CIRBP-220ENST00000588917 GFRA4Q9GZZ7 299 aa13.79□□□□□ -0.2
CIRBP-220ENST00000588917 TRGV4A0A0C4DH28 118 aa13.78□□□□□ -0.2
CIRBP-220ENST00000588917 FOXA3P55318 350 aaPredicted RBP13.78□□□□□ -0.2
CIRBP-220ENST00000588917 CFAP126Q5VTH2 177 aa13.78□□□□□ -0.2
CIRBP-220ENST00000588917 ZFP2Q6ZN57 461 aa13.78□□□□□ -0.2
CIRBP-220ENST00000588917 TSKUQ8WUA8 353 aa13.78□□□□□ -0.2
CIRBP-220ENST00000588917 PRO0255Q9UI72 69 aa13.78□□□□□ -0.2
CIRBP-220ENST00000588917 HHLA3Q9XRX5 114 aa13.78□□□□□ -0.2
CIRBP-220ENST00000588917 H3BNG1 76 aa13.77□□□□□ -0.21
CIRBP-220ENST00000588917 PPP1R2P9O14990 202 aa13.77□□□□□ -0.21
CIRBP-220ENST00000588917 IGHV3-53P01767 116 aa13.77□□□□□ -0.21
CIRBP-220ENST00000588917 HOXA5P20719 270 aa13.77□□□□□ -0.21
CIRBP-220ENST00000588917 LYZL1Q6UWQ5 148 aa13.77□□□□□ -0.21
CIRBP-220ENST00000588917 POM121L12Q8N7R1 296 aa13.77□□□□□ -0.21
CIRBP-220ENST00000588917 ZNF479Q96JC4 524 aa13.77□□□□□ -0.21
CIRBP-220ENST00000588917 LYSTQ99698 3801 aa13.77□□□□□ -0.21
CIRBP-220ENST00000588917 IGHV4-4A0A075B6R2 117 aa13.76□□□□□ -0.21
CIRBP-220ENST00000588917 RHODO00212 210 aa13.76□□□□□ -0.21
CIRBP-220ENST00000588917 NXPH4O95158 308 aa13.76□□□□□ -0.21
CIRBP-220ENST00000588917 FHL2Q14192 279 aa13.76□□□□□ -0.21
CIRBP-220ENST00000588917 C15orf53Q8NAA6 179 aa13.76□□□□□ -0.21
CIRBP-220ENST00000588917 OR10AG1Q8NH19 301 aa13.76□□□□□ -0.21
CIRBP-220ENST00000588917 V9GYV3 84 aa13.76□□□□□ -0.21
CIRBP-220ENST00000588917 STARD9Q9P2P6 4700 aa13.75□□□□□ -0.21
CIRBP-220ENST00000588917 MT-ND4LP03901 98 aa13.75□□□□□ -0.21
CIRBP-220ENST00000588917 TMEM88Q6PEY1 159 aa13.75□□□□□ -0.21
CIRBP-220ENST00000588917 BORCS7Q96B45 105 aa13.75□□□□□ -0.21
CIRBP-220ENST00000588917 EPPK1P58107 5090 aaKnown RBP13.75□□□□□ -0.21
CIRBP-220ENST00000588917 TRAV26-1A0A087WT03 109 aa13.74□□□□□ -0.21
CIRBP-220ENST00000588917 CTRLP40313 264 aa13.74□□□□□ -0.21
CIRBP-220ENST00000588917 GTSF1Q8WW33 167 aa13.74□□□□□ -0.21
CIRBP-220ENST00000588917 ANAPC16Q96DE5 110 aa13.74□□□□□ -0.21
CIRBP-220ENST00000588917 PAX4O43316 350 aa13.73□□□□□ -0.21
CIRBP-220ENST00000588917 SMIM17P0DL12 118 aa13.73□□□□□ -0.21
CIRBP-220ENST00000588917 NTF3P20783 257 aa13.73□□□□□ -0.21
CIRBP-220ENST00000588917 SSTP61278 116 aa13.73□□□□□ -0.21
CIRBP-220ENST00000588917 CNFNQ9BYD5 112 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms