RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ARMS2P0C7Q2 107 aa13.4□□□□□ -0.26
CLPTM1-209ENST00000588855 TMEM241Q24JQ0 296 aa13.4□□□□□ -0.26
CLPTM1-209ENST00000588855 GZMBP10144 247 aa13.39□□□□□ -0.27
CLPTM1-209ENST00000588855 COMMD7Q86VX2 200 aa13.39□□□□□ -0.27
CLPTM1-209ENST00000588855 C18orf15Q96N68 181 aa13.39□□□□□ -0.27
CLPTM1-209ENST00000588855 NAT8Q9UHE5 227 aa13.39□□□□□ -0.27
CLPTM1-209ENST00000588855 NACAE9PAV3 2078 aa13.39□□□□□ -0.27
CLPTM1-209ENST00000588855 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
CLPTM1-209ENST00000588855 ZNF876PQ49A33 203 aa13.39□□□□□ -0.27
CLPTM1-209ENST00000588855 LINC00862A6NCI5 91 aa13.38□□□□□ -0.27
CLPTM1-209ENST00000588855 RPP21Q9H633 154 aaKnown RBP13.38□□□□□ -0.27
CLPTM1-209ENST00000588855 SCRT2Q9NQ03 307 aa13.38□□□□□ -0.27
CLPTM1-209ENST00000588855 F5H768 121 aa13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 IGHV3-53P01767 116 aa13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 MED14OSP0DP75 135 aa13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 RPS20P60866 119 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 ADIRFQ15847 76 aa13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 UQCC3Q6UW78 93 aa13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 FAM231DQ6ZW35 169 aa13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 PTH2Q96A98 100 aa13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 KLK5Q9Y337 293 aaPredicted RBP13.37□□□□□ -0.27
CLPTM1-209ENST00000588855 IGLL5B9A064 214 aa13.36□□□□□ -0.27
CLPTM1-209ENST00000588855 HOXA5P20719 270 aa13.36□□□□□ -0.27
CLPTM1-209ENST00000588855 ERVFC1-1P60608 527 aa13.36□□□□□ -0.27
CLPTM1-209ENST00000588855 POM121L12Q8N7R1 296 aa13.36□□□□□ -0.27
CLPTM1-209ENST00000588855 ISOC2Q96AB3 205 aa13.36□□□□□ -0.27
CLPTM1-209ENST00000588855 LYSTQ99698 3801 aa13.36□□□□□ -0.27
CLPTM1-209ENST00000588855 PHLDA3Q9Y5J5 127 aa13.36□□□□□ -0.27
CLPTM1-209ENST00000588855 SNAI2O43623 268 aa13.35□□□□□ -0.27
CLPTM1-209ENST00000588855 GATCO43716 136 aaKnown RBP13.35□□□□□ -0.27
CLPTM1-209ENST00000588855 TRAV4A0A0B4J268 109 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 XKRY2A2RUG3 117 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 IGLC6P0CF74 106 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 DMRTA1Q5VZB9 504 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 OR10AG1Q8NH19 301 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 ZNF479Q96JC4 524 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 SSBP4Q9BWG4 385 aaPredicted RBP13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 ALMS1Q8TCU4 4167 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 IGHV4-4A0A075B6R2 117 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 MUC21A0A0G2JKD1 596 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 MUC21A0A140T8X8 626 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 M0R381 172 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 OR5AL1P0C617 328 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 FER1L6-AS1Q8NA97 138 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 SYT8Q8NBV8 401 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 NDUFAF3Q9BU61 184 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 TPPP3Q9BW30 176 aa13.34□□□□□ -0.27
CLPTM1-209ENST00000588855 RS1O15537 224 aa13.33□□□□□ -0.28
CLPTM1-209ENST00000588855 TMEM88Q6PEY1 159 aa13.33□□□□□ -0.28
CLPTM1-209ENST00000588855 ZFP82Q8N141 532 aa13.33□□□□□ -0.28
CLPTM1-209ENST00000588855 OR4C5Q8NGB2 326 aa13.33□□□□□ -0.28
CLPTM1-209ENST00000588855 OSTCQ9NRP0 149 aa13.33□□□□□ -0.28
CLPTM1-209ENST00000588855 ADCYAP1P18509 176 aa13.32□□□□□ -0.28
CLPTM1-209ENST00000588855 PIK3CD-AS1Q5SR53 167 aa13.32□□□□□ -0.28
CLPTM1-209ENST00000588855 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
CLPTM1-209ENST00000588855 SFRP2Q96HF1 295 aa13.32□□□□□ -0.28
CLPTM1-209ENST00000588855 JPT2Q9H910 190 aa13.32□□□□□ -0.28
CLPTM1-209ENST00000588855 DNAH1Q9P2D7 4330 aa13.31□□□□□ -0.28
CLPTM1-209ENST00000588855 TMEM218A2RU14 115 aa13.31□□□□□ -0.28
CLPTM1-209ENST00000588855 NXPH4O95158 308 aa13.31□□□□□ -0.28
CLPTM1-209ENST00000588855 FHL2Q14192 279 aa13.31□□□□□ -0.28
CLPTM1-209ENST00000588855 C15orf54Q8N8G6 183 aa13.31□□□□□ -0.28
CLPTM1-209ENST00000588855 TRAV26-1A0A087WT03 109 aa13.3□□□□□ -0.28
CLPTM1-209ENST00000588855 SSTP61278 116 aa13.3□□□□□ -0.28
CLPTM1-209ENST00000588855 CT83Q5H943 113 aa13.3□□□□□ -0.28
CLPTM1-209ENST00000588855 GTSF1Q8WW33 167 aa13.3□□□□□ -0.28
CLPTM1-209ENST00000588855 V9GYV3 84 aa13.3□□□□□ -0.28
CLPTM1-209ENST00000588855 KMT2CQ8NEZ4 4911 aaKnown RBP13.3□□□□□ -0.28
CLPTM1-209ENST00000588855 TRGV4A0A0C4DH28 118 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 A0A0J9YY99 117 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 A8MWL6 223 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 A8MWV9 139 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 SPANXN1Q5VSR9 72 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 LYZL1Q6UWQ5 148 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 OR10G8Q8NGN5 311 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 FAM210BQ96KR6 192 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 APLNQ9ULZ1 77 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 IGHV3-73A0A0B4J1V6 119 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 A0A1W2PPQ1 181 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 CTRLP40313 264 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 SAMD10Q9BYL1 202 aa13.29□□□□□ -0.28
CLPTM1-209ENST00000588855 F8W036 122 aa13.28□□□□□ -0.28
CLPTM1-209ENST00000588855 VSIG2Q96IQ7 327 aa13.28□□□□□ -0.28
CLPTM1-209ENST00000588855 SACSQ9NZJ4 4579 aa13.27□□□□□ -0.28
CLPTM1-209ENST00000588855 F2Z2F3 143 aa13.27□□□□□ -0.29
CLPTM1-209ENST00000588855 TCTAP57738 103 aa13.27□□□□□ -0.29
CLPTM1-209ENST00000588855 PNRC1Q12796 327 aaPredicted RBP13.27□□□□□ -0.29
CLPTM1-209ENST00000588855 TSKUQ8WUA8 353 aa13.27□□□□□ -0.29
CLPTM1-209ENST00000588855 PRO0255Q9UI72 69 aa13.27□□□□□ -0.29
CLPTM1-209ENST00000588855 VPS13DQ5THJ4 4388 aa13.27□□□□□ -0.29
CLPTM1-209ENST00000588855 A0A087WWL8 130 aa13.26□□□□□ -0.29
CLPTM1-209ENST00000588855 CRYBA4P53673 196 aa13.26□□□□□ -0.29
CLPTM1-209ENST00000588855 FAM74A4Q5TZK3 123 aa13.26□□□□□ -0.29
CLPTM1-209ENST00000588855 MSRB1Q9NZV6 116 aa13.26□□□□□ -0.29
CLPTM1-209ENST00000588855 HHLA3Q9XRX5 114 aa13.26□□□□□ -0.29
CLPTM1-209ENST00000588855 CACNG7P62955 275 aa13.25□□□□□ -0.29
CLPTM1-209ENST00000588855 UFSP1Q6NVU6 142 aa13.25□□□□□ -0.29
CLPTM1-209ENST00000588855 PGLYRP4Q96LB8 373 aa13.25□□□□□ -0.29
CLPTM1-209ENST00000588855 SEC11CQ9BY50 192 aa13.25□□□□□ -0.29
CLPTM1-209ENST00000588855 PAX4O43316 350 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 268 ms