RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SMIM17P0DL12 118 aa10.7□□□□□ -0.7
NEDD4L-223ENST00000588516 TMEM219Q86XT9 240 aa10.7□□□□□ -0.7
NEDD4L-223ENST00000588516 MCRIP2Q9BUT9 160 aaKnown RBP10.7□□□□□ -0.7
NEDD4L-223ENST00000588516 DPH3P1Q9H4G8 78 aa10.7□□□□□ -0.7
NEDD4L-223ENST00000588516 UFC1Q9Y3C8 167 aa10.7□□□□□ -0.7
NEDD4L-223ENST00000588516 TRAV12-1A0A0B4J245 112 aa10.69□□□□□ -0.7
NEDD4L-223ENST00000588516 TRAV40A0A0B4J280 105 aa10.69□□□□□ -0.7
NEDD4L-223ENST00000588516 C9orf118A6NHY6 69 aa10.69□□□□□ -0.7
NEDD4L-223ENST00000588516 CBY3A6NI87 242 aa10.69□□□□□ -0.7
NEDD4L-223ENST00000588516 ZNF207O43670 478 aaKnown RBP10.69□□□□□ -0.7
NEDD4L-223ENST00000588516 FOXE3Q13461 319 aa10.69□□□□□ -0.7
NEDD4L-223ENST00000588516 ODF1Q14990 250 aa10.69□□□□□ -0.7
NEDD4L-223ENST00000588516 APRG1Q8IVJ8 170 aa10.69□□□□□ -0.7
NEDD4L-223ENST00000588516 IGLV2-18A0A075B6J9 118 aa10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 MSMBP08118 114 aa10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 PPIFP30405 207 aaKnown RBP10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 NMUP48645 174 aa10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 TAL2Q16559 108 aa10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 NRACQ8N912 160 aa10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 PHLDA3Q9Y5J5 127 aa10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 ZANQ9Y493 2812 aa10.68□□□□□ -0.7
NEDD4L-223ENST00000588516 IGHV3OR16-13A0A075B7E8 117 aa10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 A0A087WX48 190 aa10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 IGHV3-49A0A0A0MS15 119 aa10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 IGHV3-74A0A0B4J1X5 117 aa10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 B4DSR2 109 aa10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 PF4V1P10720 104 aa10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 SMIM2Q9BVW6 85 aa10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 DAZ1Q9NQZ3 744 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 C11orf21Q9P2W6 132 aa10.67□□□□□ -0.7
NEDD4L-223ENST00000588516 GAGE10A6NGK3 116 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 H3BUX3 64 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 H3BVH4 76 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 H7C1H1 209 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 SOCS3O14543 225 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 IGLV1-40P01703 118 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 SMIM13P0DJ93 91 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 PRB4P10163 310 aaPredicted RBP10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 ATP5J2P56134 94 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 RPL32P62910 135 aaKnown RBP10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 FAM19A4Q96LR4 140 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 DKK2Q9UBU2 259 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 WNK2Q9Y3S1 2297 aa10.66□□□□□ -0.7
NEDD4L-223ENST00000588516 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.7
NEDD4L-223ENST00000588516 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
NEDD4L-223ENST00000588516 TM4SF20Q53R12 229 aa10.65□□□□□ -0.7
NEDD4L-223ENST00000588516 ADAMTSL5Q6ZMM2 481 aa10.65□□□□□ -0.7
NEDD4L-223ENST00000588516 GPHB5Q86YW7 130 aa10.65□□□□□ -0.7
NEDD4L-223ENST00000588516 ZFAND2AQ8N6M9 145 aa10.65□□□□□ -0.7
NEDD4L-223ENST00000588516 OR5A1Q8NGJ0 315 aa10.65□□□□□ -0.7
NEDD4L-223ENST00000588516 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
NEDD4L-223ENST00000588516 J3QLI3 93 aa10.64□□□□□ -0.71
NEDD4L-223ENST00000588516 K7ERU9 68 aa10.64□□□□□ -0.71
NEDD4L-223ENST00000588516 SUMO2P61956 95 aaKnown RBP10.64□□□□□ -0.71
NEDD4L-223ENST00000588516 PAPPA-AS1Q5QFB9 102 aa10.64□□□□□ -0.71
NEDD4L-223ENST00000588516 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
NEDD4L-223ENST00000588516 YAE1D1Q9NRH1 226 aa10.64□□□□□ -0.71
NEDD4L-223ENST00000588516 ANK3Q12955 4377 aaKnown RBP10.63□□□□□ -0.71
NEDD4L-223ENST00000588516 LINC01619G3V211 115 aa10.63□□□□□ -0.71
NEDD4L-223ENST00000588516 CDKN1BP46527 198 aa10.63□□□□□ -0.71
NEDD4L-223ENST00000588516 FXYD7P58549 80 aa10.63□□□□□ -0.71
NEDD4L-223ENST00000588516 BRD3OSQ6XYD6 125 aa10.63□□□□□ -0.71
NEDD4L-223ENST00000588516 POM121L12Q8N7R1 296 aa10.63□□□□□ -0.71
NEDD4L-223ENST00000588516 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
NEDD4L-223ENST00000588516 HHLA3Q9XRX5 114 aa10.63□□□□□ -0.71
NEDD4L-223ENST00000588516 IGHV3OR16-10A0A075B7F0 116 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 F8VRH5 84 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 NXPH4O95158 308 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 RNASE4P34096 147 aaKnown RBP10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 KRTAP1-1Q07627 177 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 LY6EQ16553 131 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 KRTAP24-1Q3LI83 254 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 FAM159AQ6UWV7 190 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 MAPK1IP1LQ8NDC0 245 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 SCGB3A1Q96QR1 104 aa10.62□□□□□ -0.71
NEDD4L-223ENST00000588516 FABP2P12104 132 aa10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 GATA1P15976 413 aaPredicted RBP10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 ANXA2RQ3ZCQ2 193 aa10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 ZC2HC1BQ5TFG8 222 aa10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 UNQ9165/PRO28630Q6UXU0 137 aa10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 Q6ZVH6 145 aa10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 ERASQ7Z444 233 aa10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 TMEM160Q9NX00 188 aa10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 LINC00527Q9UJ94 153 aa10.61□□□□□ -0.71
NEDD4L-223ENST00000588516 K7EP34 96 aa10.6□□□□□ -0.71
NEDD4L-223ENST00000588516 IGHV4-38-2P0DP08 117 aa10.6□□□□□ -0.71
NEDD4L-223ENST00000588516 CFHR3Q02985 330 aa10.6□□□□□ -0.71
NEDD4L-223ENST00000588516 WFDC3Q8IUB2 231 aa10.6□□□□□ -0.71
NEDD4L-223ENST00000588516 PCP2Q8IVA1 136 aa10.6□□□□□ -0.71
NEDD4L-223ENST00000588516 SYT8Q8NBV8 401 aa10.6□□□□□ -0.71
NEDD4L-223ENST00000588516 CHAC1Q9BUX1 264 aa10.6□□□□□ -0.71
NEDD4L-223ENST00000588516 TM2D2Q9BX73 214 aa10.6□□□□□ -0.71
NEDD4L-223ENST00000588516 IGHV4OR15-8A0A075B7B6 117 aa10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 A0A087WW49 117 aa10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms