RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 RBBP6Q7Z6E9 1792 aaKnown RBP1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 TRAV14DV4A0A0A6YYC5 116 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 TRAV12-1A0A0B4J245 112 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 MUC21A0A140T8X8 626 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 GNGT2O14610 69 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 LINC00032P0C843 101 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 IGLC1P0CG04 106 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 IL7P13232 177 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 RPL26P61254 145 aaKnown RBP1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 UBE2G1P62253 170 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 KIAA1549Q9HCM3 1950 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 MAGI1Q96QZ7 1491 aaPredicted RBP1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 ARHGAP35Q9NRY4 1499 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 ARHGAP32A7KAX9 2087 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 ARHGAP5Q13017 1502 aa1.3□□□□□ -2.2
CACNA1A-208ENST00000587451 KDM5AP29375 1690 aaKnown RBP1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 COL24A1Q17RW2 1714 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 SPHKAPQ2M3C7 1700 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 CASZ1Q86V15 1759 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 MCM3APO60318 1980 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 A0A087WSZ3 146 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 C2orf70A6NJV1 201 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 CXCL8P10145 99 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 COX7CP15954 63 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 DCDP81605 110 aaKnown RBP1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 IQCJQ1A5X6 159 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 SPANXN1Q5VSR9 72 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 C12orf73Q69YU5 71 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 RPL7L1Q6DKI1 246 aaKnown RBP1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 C5orf38Q86SI9 138 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 SBSPONQ8IVN8 264 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 SPTSSBQ8NFR3 76 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 TMEM141Q96I45 108 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 Q9BRP9 147 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 NPVFQ9HCQ7 196 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 BET1LQ9NYM9 111 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 CCL26Q9Y258 94 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 TROQ12816 1431 aaPredicted RBP1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 PLEKHH2Q8IVE3 1493 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 GLI3P10071 1580 aa1.29□□□□□ -2.2
CACNA1A-208ENST00000587451 UBE2L5PA0A1B0GUS4 154 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 hADV29S1A0JD25 119 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 A6NIN4 97 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 H3BQ15 152 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 IGKCP01834 107 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 SLC25A6P12236 298 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 POLR2JP52435 117 aaKnown RBP1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 UBE2L3P68036 154 aaKnown RBP1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 PCOTHQ58A44 107 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 FAM74A1Q5RGS3 127 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 C2orf82Q6UX34 121 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 Q6ZTI0 123 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 LCN9Q8WX39 176 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 PMCHL2Q9BQD1 86 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 TIMM21Q9BVV7 248 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 PRO2289Q9P1D8 64 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 PSORS1C2Q9UIG4 136 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 ABCC5O15440 1437 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 TEX14Q8IWB6 1497 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 LRP5O75197 1615 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 MYLKQ15746 1914 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 SCN3AQ9NY46 2000 aa1.28□□□□□ -2.2
CACNA1A-208ENST00000587451 PRRC2BQ5JSZ5 2229 aaKnown RBP1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 EML5Q05BV3 1969 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 STRCQ7RTU9 1775 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 SLIT2O94813 1529 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 FYCO1Q9BQS8 1478 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 CPSF1Q10570 1443 aaKnown RBP1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 C10orf71Q711Q0 1435 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 CASKIN1Q8WXD9 1431 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 A0A0G2JQZ4 141 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 SSSCA1O60232 199 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 MRPS14O60783 128 aaKnown RBP1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 CBLN1P23435 193 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 Q0VG73 95 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 RHOHQ15669 191 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 SPRNQ5BIV9 151 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 C9orf116Q5BN46 136 aaPredicted RBP1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 SLC48A1Q6P1K1 146 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 UNQ5815/PRO19632Q6UWF5 114 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 LINC00474Q9P2X8 69 aa1.27□□□□□ -2.21
CACNA1A-208ENST00000587451 LTBP2Q14767 1821 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 ABCA3Q99758 1704 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 ANKRD36BQ8N2N9 1353 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 F8W1H4 67 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 CCKP06307 115 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 NMBP08949 121 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 FAUP35544 74 aaKnown RBP1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 ATP5EP56381 51 aaPredicted RBP1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 GNG11P61952 73 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 PEA15Q15121 130 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 TPRXLQ17RH7 258 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 CSAG1Q6PB30 78 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 COMMD6Q7Z4G1 85 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 C10orf82Q8WW14 230 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 MICAL3Q7RTP6 2002 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 PLXNA2O75051 1894 aa1.26□□□□□ -2.21
CACNA1A-208ENST00000587451 SMARCA4P51532 1647 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms