RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 GTSF1LQ9H1H1 148 aa12.89□□□□□ -0.35
TRAF4-216ENST00000586813 PSG8Q9UQ74 426 aa12.89□□□□□ -0.35
TRAF4-216ENST00000586813 IGLV2-11P01706 119 aa12.88□□□□□ -0.35
TRAF4-216ENST00000586813 RNASE3P12724 160 aaKnown RBP12.88□□□□□ -0.35
TRAF4-216ENST00000586813 ZFP69Q49AA0 526 aa12.88□□□□□ -0.35
TRAF4-216ENST00000586813 OR2G3Q8NGZ4 309 aa12.88□□□□□ -0.35
TRAF4-216ENST00000586813 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
TRAF4-216ENST00000586813 FAM30AQ9NZY2 134 aa12.88□□□□□ -0.35
TRAF4-216ENST00000586813 GGTLC3B5MD39 225 aa12.87□□□□□ -0.35
TRAF4-216ENST00000586813 GCHFRP30047 84 aa12.87□□□□□ -0.35
TRAF4-216ENST00000586813 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
TRAF4-216ENST00000586813 HSD17B11Q8NBQ5 300 aa12.87□□□□□ -0.35
TRAF4-216ENST00000586813 RAB24Q969Q5 203 aa12.87□□□□□ -0.35
TRAF4-216ENST00000586813 C1QBP02746 253 aa12.86□□□□□ -0.35
TRAF4-216ENST00000586813 FLI1Q01543 452 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-216ENST00000586813 PRNTQ86SH4 94 aa12.86□□□□□ -0.35
TRAF4-216ENST00000586813 Q8N3U1 123 aa12.86□□□□□ -0.35
TRAF4-216ENST00000586813 TM2D2Q9BX73 214 aa12.86□□□□□ -0.35
TRAF4-216ENST00000586813 WFDC2Q14508 124 aa12.85□□□□□ -0.35
TRAF4-216ENST00000586813 CYB561D1Q8N8Q1 229 aa12.85□□□□□ -0.35
TRAF4-216ENST00000586813 PSMG3Q9BT73 122 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-216ENST00000586813 PARLQ9H300 379 aa12.85□□□□□ -0.35
TRAF4-216ENST00000586813 EPDR1Q9UM22 224 aa12.85□□□□□ -0.35
TRAF4-216ENST00000586813 LINC00694P0DN24 101 aa12.84□□□□□ -0.35
TRAF4-216ENST00000586813 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
TRAF4-216ENST00000586813 ATP6V0CP27449 155 aa12.83□□□□□ -0.36
TRAF4-216ENST00000586813 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
TRAF4-216ENST00000586813 ZFP2Q6ZN57 461 aa12.83□□□□□ -0.36
TRAF4-216ENST00000586813 TMEM167BQ9NRX6 74 aa12.83□□□□□ -0.36
TRAF4-216ENST00000586813 IGKV3D-20A0A0C4DH25 116 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 A8MWV9 139 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 CXorf1O96002 111 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 MBP02144 154 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 GAGE1Q13065 139 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 GAGE4Q13068 117 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 GAGE5Q13069 117 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 PIK3CD-AS1Q5SR53 167 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 Q6ZSA8 131 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 SH3BGRL3Q9H299 93 aa12.82□□□□□ -0.36
TRAF4-216ENST00000586813 TRAV8-3A0A0A6YYJ7 113 aa12.81□□□□□ -0.36
TRAF4-216ENST00000586813 S100A4P26447 101 aaKnown RBP12.81□□□□□ -0.36
TRAF4-216ENST00000586813 SERF2P84101 59 aa12.81□□□□□ -0.36
TRAF4-216ENST00000586813 AQP10Q96PS8 301 aa12.81□□□□□ -0.36
TRAF4-216ENST00000586813 LECT2O14960 151 aa12.8□□□□□ -0.36
TRAF4-216ENST00000586813 LGALSLQ3ZCW2 172 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-216ENST00000586813 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
TRAF4-216ENST00000586813 LINC00479Q96M42 142 aa12.8□□□□□ -0.36
TRAF4-216ENST00000586813 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-216ENST00000586813 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
TRAF4-216ENST00000586813 J3QL48 77 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 ASIPP42127 132 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 TOR2AQ5JU69 321 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 UFSP1Q6NVU6 142 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 OR2T35Q8NGX2 323 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 Q9UF83 564 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 TNFSF18Q9UNG2 199 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 ALG5Q9Y673 324 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 ARL2-SNX15V9GYD0 113 aa12.79□□□□□ -0.36
TRAF4-216ENST00000586813 A0A087WWC5 75 aa12.78□□□□□ -0.36
TRAF4-216ENST00000586813 TRAV34A0A0B4J273 112 aa12.78□□□□□ -0.36
TRAF4-216ENST00000586813 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
TRAF4-216ENST00000586813 PLA2G1BP04054 148 aaKnown RBP12.78□□□□□ -0.36
TRAF4-216ENST00000586813 C14orf178Q8N769 122 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-216ENST00000586813 SAMD10Q9BYL1 202 aa12.78□□□□□ -0.36
TRAF4-216ENST00000586813 JPT2Q9H910 190 aa12.78□□□□□ -0.36
TRAF4-216ENST00000586813 IL36BQ9NZH7 164 aa12.78□□□□□ -0.36
TRAF4-216ENST00000586813 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-216ENST00000586813 FABP5P3A8MUU1 101 aa12.77□□□□□ -0.37
TRAF4-216ENST00000586813 FGF8P55075 233 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-216ENST00000586813 Q86TA4 180 aa12.77□□□□□ -0.37
TRAF4-216ENST00000586813 LINC00528Q8N1L1 170 aa12.77□□□□□ -0.37
TRAF4-216ENST00000586813 H3BVH4 76 aa12.76□□□□□ -0.37
TRAF4-216ENST00000586813 B4DEV8 164 aa12.75□□□□□ -0.37
TRAF4-216ENST00000586813 RHODO00212 210 aa12.75□□□□□ -0.37
TRAF4-216ENST00000586813 IFNA7P01567 189 aa12.75□□□□□ -0.37
TRAF4-216ENST00000586813 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
TRAF4-216ENST00000586813 BAALCQ8WXS3 180 aa12.75□□□□□ -0.37
TRAF4-216ENST00000586813 COX11Q9Y6N1 276 aa12.75□□□□□ -0.37
TRAF4-216ENST00000586813 PEX7O00628 323 aa12.74□□□□□ -0.37
TRAF4-216ENST00000586813 ZNF726P1Q15940 193 aa12.74□□□□□ -0.37
TRAF4-216ENST00000586813 SYT8Q8NBV8 401 aa12.74□□□□□ -0.37
TRAF4-216ENST00000586813 URGCP-MRPS24S4R325 110 aa12.74□□□□□ -0.37
TRAF4-216ENST00000586813 UBE2G2P60604 165 aa12.73□□□□□ -0.37
TRAF4-216ENST00000586813 LINC01620Q4KN68 170 aa12.73□□□□□ -0.37
TRAF4-216ENST00000586813 DNLZQ5SXM8 178 aa12.73□□□□□ -0.37
TRAF4-216ENST00000586813 NIT1Q86X76 327 aa12.73□□□□□ -0.37
TRAF4-216ENST00000586813 RMI2Q96E14 147 aa12.73□□□□□ -0.37
TRAF4-216ENST00000586813 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 KRBOX1C9JBD0 128 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 M0R036 132 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 PTTG1O95997 202 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 ARMS2P0C7Q2 107 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 Q5BKY6 102 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 FAM74A4Q5TZK3 123 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 RPL7L1Q6DKI1 246 aaKnown RBP12.72□□□□□ -0.37
TRAF4-216ENST00000586813 SCXQ7RTU7 201 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 OR11H4Q8NGC9 324 aa12.72□□□□□ -0.37
TRAF4-216ENST00000586813 ZC2HC1AQ96GY0 325 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms