RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 SH2D1AO60880 128 aa19.18■□□□□ 0.66
LIG3-208ENST00000586407 UMAD1C9J7I0 102 aa19.17■□□□□ 0.66
LIG3-208ENST00000586407 S100A4P26447 101 aaKnown RBP19.17■□□□□ 0.66
LIG3-208ENST00000586407 AKR1C3P42330 323 aa19.17■□□□□ 0.66
LIG3-208ENST00000586407 NHLRC2Q8NBF2 726 aa19.17■□□□□ 0.66
LIG3-208ENST00000586407 FMC1Q96HJ9 113 aa19.17■□□□□ 0.66
LIG3-208ENST00000586407 TNFRSF18Q9Y5U5 241 aa19.17■□□□□ 0.66
LIG3-208ENST00000586407 B4DEV8 164 aa19.16■□□□□ 0.66
LIG3-208ENST00000586407 SLC25A29Q8N8R3 303 aa19.16■□□□□ 0.66
LIG3-208ENST00000586407 GRIFINA4D1Z8 144 aa19.15■□□□□ 0.66
LIG3-208ENST00000586407 H3BVH4 76 aa19.15■□□□□ 0.66
LIG3-208ENST00000586407 ASIPP42127 132 aa19.15■□□□□ 0.66
LIG3-208ENST00000586407 TXNDC17Q9BRA2 123 aa19.15■□□□□ 0.66
LIG3-208ENST00000586407 ZFP30Q9Y2G7 519 aa19.15■□□□□ 0.66
LIG3-208ENST00000586407 JPT2Q9H910 190 aa19.14■□□□□ 0.65
LIG3-208ENST00000586407 TMSB15BA0A087X1C1 80 aa19.13■□□□□ 0.65
LIG3-208ENST00000586407 SCO2A0A1W2PP80 73 aa19.13■□□□□ 0.65
LIG3-208ENST00000586407 KRBOX1C9JBD0 128 aa19.13■□□□□ 0.65
LIG3-208ENST00000586407 H2AFB1P0C5Y9 115 aa19.13■□□□□ 0.65
LIG3-208ENST00000586407 TPT1P13693 172 aaKnown RBP19.13■□□□□ 0.65
LIG3-208ENST00000586407 PTH2Q96A98 100 aa19.13■□□□□ 0.65
LIG3-208ENST00000586407 LTAP01374 205 aa19.12■□□□□ 0.65
LIG3-208ENST00000586407 MED14OSP0DP75 135 aa19.12■□□□□ 0.65
LIG3-208ENST00000586407 EIF5AP63241 154 aaKnown RBP19.12■□□□□ 0.65
LIG3-208ENST00000586407 LGALSLQ3ZCW2 172 aaPredicted RBP19.12■□□□□ 0.65
LIG3-208ENST00000586407 FAM162BQ5T6X4 162 aa19.12■□□□□ 0.65
LIG3-208ENST00000586407 Q6ZSN1 163 aa19.12■□□□□ 0.65
LIG3-208ENST00000586407 COX8CQ7Z4L0 72 aa19.12■□□□□ 0.65
LIG3-208ENST00000586407 TRBV6-1A0A0K0K1D8 114 aa19.11■□□□□ 0.65
LIG3-208ENST00000586407 C16orf90A8MZG2 172 aa19.11■□□□□ 0.65
LIG3-208ENST00000586407 Q6ZRN7 208 aaPredicted RBP19.11■□□□□ 0.65
LIG3-208ENST00000586407 TCEAL7Q9BRU2 100 aa19.11■□□□□ 0.65
LIG3-208ENST00000586407 PARLQ9H300 379 aa19.11■□□□□ 0.65
LIG3-208ENST00000586407 LY96Q9Y6Y9 160 aa19.1■□□□□ 0.65
LIG3-208ENST00000586407 ARMS2P0C7Q2 107 aa19.09■□□□□ 0.65
LIG3-208ENST00000586407 CCL20P78556 96 aa19.09■□□□□ 0.65
LIG3-208ENST00000586407 RHOHQ15669 191 aa19.09■□□□□ 0.65
LIG3-208ENST00000586407 ZNF674Q2M3X9 581 aa19.09■□□□□ 0.65
LIG3-208ENST00000586407 SPATA12Q7Z6I5 190 aa19.09■□□□□ 0.65
LIG3-208ENST00000586407 PRADC1Q9BSG0 188 aa19.09■□□□□ 0.65
LIG3-208ENST00000586407 SAMD10Q9BYL1 202 aa19.09■□□□□ 0.65
LIG3-208ENST00000586407 IL36BQ9NZH7 164 aa19.09■□□□□ 0.65
LIG3-208ENST00000586407 TRBV6-4A0A1B0GX49 114 aa19.08■□□□□ 0.64
LIG3-208ENST00000586407 DMRTA1Q5VZB9 504 aa19.08■□□□□ 0.64
LIG3-208ENST00000586407 TCTE3Q8IZS6 198 aa19.07■□□□□ 0.64
LIG3-208ENST00000586407 CIDEAO60543 219 aa19.06■□□□□ 0.64
LIG3-208ENST00000586407 KRTAP10-2P60368 255 aa19.06■□□□□ 0.64
LIG3-208ENST00000586407 A8MWV9 139 aa19.05■□□□□ 0.64
LIG3-208ENST00000586407 DNAH10OSP0CZ25 163 aa19.05■□□□□ 0.64
LIG3-208ENST00000586407 MGST1P10620 155 aaKnown RBP19.05■□□□□ 0.64
LIG3-208ENST00000586407 BTF3P20290 206 aaKnown RBP19.05■□□□□ 0.64
LIG3-208ENST00000586407 RPL19P84098 196 aaKnown RBP19.05■□□□□ 0.64
LIG3-208ENST00000586407 LINC01559Q495D7 138 aa19.05■□□□□ 0.64
LIG3-208ENST00000586407 DNLZQ5SXM8 178 aa19.05■□□□□ 0.64
LIG3-208ENST00000586407 Q6ZNX1 250 aa19.05■□□□□ 0.64
LIG3-208ENST00000586407 SH2D6Q7Z4S9 175 aa19.05■□□□□ 0.64
LIG3-208ENST00000586407 GNG13Q9P2W3 67 aa19.05■□□□□ 0.64
LIG3-208ENST00000586407 Q9UF83 564 aa19.05■□□□□ 0.64
LIG3-208ENST00000586407 hCG_2014768A0A024R1R8 64 aa19.03■□□□□ 0.64
LIG3-208ENST00000586407 UFSP1Q6NVU6 142 aa19.03■□□□□ 0.64
LIG3-208ENST00000586407 GAGE12JA6NER3 117 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 M0R381 172 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 EVI2AP22794 236 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 TIRAPP58753 221 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 GAGE1Q13065 139 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 GAGE4Q13068 117 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 GAGE5Q13069 117 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 GAGE13Q4V321 117 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 ZFP2Q6ZN57 461 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 BAGE2Q86Y30 109 aa19.02■□□□□ 0.64
LIG3-208ENST00000586407 C14orf178Q8N769 122 aaPredicted RBP19.02■□□□□ 0.64
LIG3-208ENST00000586407 TRAV9-2A0A087WT02 112 aa19.01■□□□□ 0.63
LIG3-208ENST00000586407 FUSP35637 526 aaKnown RBP eCLIP19.01■□□□□ 0.63
LIG3-208ENST00000586407 PIK3CD-AS1Q5SR53 167 aa19.01■□□□□ 0.63
LIG3-208ENST00000586407 FAM74A4Q5TZK3 123 aa19.01■□□□□ 0.63
LIG3-208ENST00000586407 SYT8Q8NBV8 401 aa19.01■□□□□ 0.63
LIG3-208ENST00000586407 DERL1Q9BUN8 251 aa19.01■□□□□ 0.63
LIG3-208ENST00000586407 KRTAP17-1Q9BYP8 105 aa19.01■□□□□ 0.63
LIG3-208ENST00000586407 MSRB1Q9NZV6 116 aa19.01■□□□□ 0.63
LIG3-208ENST00000586407 PHLDA3Q9Y5J5 127 aa19.01■□□□□ 0.63
LIG3-208ENST00000586407 A0A087WWL8 130 aa19■□□□□ 0.63
LIG3-208ENST00000586407 S100A9P06702 114 aaKnown RBP19■□□□□ 0.63
LIG3-208ENST00000586407 CRYGDP07320 174 aa19■□□□□ 0.63
LIG3-208ENST00000586407 OR10J3Q5JRS4 329 aa19■□□□□ 0.63
LIG3-208ENST00000586407 PRR27Q6MZM9 219 aa19■□□□□ 0.63
LIG3-208ENST00000586407 ATP6V0E2Q8NHE4 81 aa19■□□□□ 0.63
LIG3-208ENST00000586407 SCRT2Q9NQ03 307 aa19■□□□□ 0.63
LIG3-208ENST00000586407 SULT1A2P50226 295 aa18.99■□□□□ 0.63
LIG3-208ENST00000586407 MLST8Q9BVC4 326 aa18.99■□□□□ 0.63
LIG3-208ENST00000586407 IGHV3-38A0A0C4DH36 116 aa18.98■□□□□ 0.63
LIG3-208ENST00000586407 C1QBP02746 253 aa18.98■□□□□ 0.63
LIG3-208ENST00000586407 MANBALQ9NQG1 85 aa18.98■□□□□ 0.63
LIG3-208ENST00000586407 TRAV1-1A0A0B4J248 108 aa18.97■□□□□ 0.63
LIG3-208ENST00000586407 LINC00694P0DN24 101 aa18.97■□□□□ 0.63
LIG3-208ENST00000586407 RPL35P42766 123 aaKnown RBP18.97■□□□□ 0.63
LIG3-208ENST00000586407 RAB5CP51148 216 aa18.97■□□□□ 0.63
LIG3-208ENST00000586407 GTSF1LQ9H1H1 148 aa18.97■□□□□ 0.63
LIG3-208ENST00000586407 TRAV8-6A0A0B4J262 113 aa18.96■□□□□ 0.63
LIG3-208ENST00000586407 IGHV3-30P01768 117 aa18.96■□□□□ 0.63
LIG3-208ENST00000586407 IGHV3-33P01772 117 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms