RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ZNF124Q15973 351 aa9.43□□□□□ -0.9
SMARCA4-208ENST00000585799 Q6YL49 198 aa9.43□□□□□ -0.9
SMARCA4-208ENST00000585799 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
SMARCA4-208ENST00000585799 ZMAT5Q9UDW3 170 aaKnown RBP9.43□□□□□ -0.9
SMARCA4-208ENST00000585799 TEX15Q9BXT5 2789 aa9.43□□□□□ -0.9
SMARCA4-208ENST00000585799 C2orf70A6NJV1 201 aa9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 STHQ8IWL8 128 aa9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 ZNF747Q9BV97 191 aa9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 RPL35AP18077 110 aaKnown RBP9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 LAGE3Q14657 143 aa9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 MRPL53Q96EL3 112 aaKnown RBP9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 ST20Q9HBF5 79 aa9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 GCSHP23434 173 aa9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 MPV17L2Q567V2 206 aa9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 GPHB5Q86YW7 130 aa9.42□□□□□ -0.9
SMARCA4-208ENST00000585799 PSMB8P28062 276 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 CTRLP40313 264 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 DKK2Q9UBU2 259 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 CDKN1BP46527 198 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 SAMD13Q5VXD3 122 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 KIR2DL5BA0A0G2JN68 375 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 KIR2DL5BA0A0G2JPC4 375 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 IGHV3-53P01767 116 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 IGLC6P0CF74 106 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 DGAT2L7PQ6IED9 249 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 Q6ZVH6 145 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 KIR2DL5AQ8N109 375 aa9.41□□□□□ -0.9
SMARCA4-208ENST00000585799 ATP5LO75964 103 aa9.4□□□□□ -0.9
SMARCA4-208ENST00000585799 IGLV1-40P01703 118 aa9.4□□□□□ -0.9
SMARCA4-208ENST00000585799 TMEM61Q8N0U2 210 aa9.4□□□□□ -0.9
SMARCA4-208ENST00000585799 URB1-AS1Q96HZ7 61 aa9.4□□□□□ -0.9
SMARCA4-208ENST00000585799 JMJD8Q96S16 334 aa9.4□□□□□ -0.9
SMARCA4-208ENST00000585799 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.9
SMARCA4-208ENST00000585799 ZNF702PQ9H963 129 aa9.4□□□□□ -0.9
SMARCA4-208ENST00000585799 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.91
SMARCA4-208ENST00000585799 RIPPLY3P57055 190 aa9.4□□□□□ -0.91
SMARCA4-208ENST00000585799 DLX4Q92988 240 aaPredicted RBP9.4□□□□□ -0.91
SMARCA4-208ENST00000585799 DNAJC9-AS1A6NH13 148 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 PRM2P04554 102 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 SUMO2P61956 95 aaKnown RBP9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 ZFAND2AQ8N6M9 145 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 IGHV1OR15-1A0A075B7D0 117 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 TMEM170BQ5T4T1 132 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 ZC2HC1BQ5TFG8 222 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 SMR3AQ99954 134 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 MDFICQ9P1T7 246 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 U3KQE9 123 aa9.39□□□□□ -0.91
SMARCA4-208ENST00000585799 K7EMT4 169 aa9.38□□□□□ -0.91
SMARCA4-208ENST00000585799 LBHQ53QV2 105 aaPredicted RBP9.38□□□□□ -0.91
SMARCA4-208ENST00000585799 ARL6IP6Q8N6S5 226 aa9.38□□□□□ -0.91
SMARCA4-208ENST00000585799 SPATA12Q7Z6I5 190 aa9.38□□□□□ -0.91
SMARCA4-208ENST00000585799 OR9G4Q8NGQ1 327 aa9.38□□□□□ -0.91
SMARCA4-208ENST00000585799 C12orf54Q6X4T0 127 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 Q8N8P6 123 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 LENEPQ9Y5L5 61 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 DPM2O94777 84 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 CITED2Q99967 270 aaPredicted RBP9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 TTTY13Q9BZ97 58 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 CCL24O00175 119 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 IGKCP01834 107 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 Q6ZSV7 163 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 Q8N1Y9 231 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 OR4C5Q8NGB2 326 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 ATP6V0BQ99437 205 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 SMIM2Q9BVW6 85 aa9.37□□□□□ -0.91
SMARCA4-208ENST00000585799 OR11H12B2RN74 326 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 PHLDA1Q8WV24 401 aaPredicted RBP9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 C2orf88Q9BSF0 95 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 IGHV3-64A0A075B6Q5 118 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 CD28P10747 220 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 NUTF2P61970 127 aaKnown RBP9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 SRSF9Q13242 221 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 ORMDL2Q53FV1 153 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 CYSLTR1Q9Y271 337 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 ANKRD39Q53RE8 183 aa9.36□□□□□ -0.91
SMARCA4-208ENST00000585799 A0A0J9YX75 114 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 CFHR3Q02985 330 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 C2orf66Q6UXQ4 117 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 OR11H2Q8NH07 326 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 MRPL35Q9NZE8 188 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 CSMD1Q96PZ7 3565 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 TRGV1A0A0A0MS02 117 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 SDHAF1A6NFY7 115 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 RNF185Q96GF1 192 aa9.35□□□□□ -0.91
SMARCA4-208ENST00000585799 RRN3P1Q2M238 152 aa9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 CHTOPQ9Y3Y2 248 aaKnown RBP9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 SVEP1Q4LDE5 3571 aa9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 LRRC75A-AS1Q8N1F1 130 aa9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 MRAP2Q96G30 205 aa9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 IGHV3-38A0A0C4DH36 116 aa9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 K7EQG2 157 aa9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 PPP1R17O96001 155 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms