RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 Q6ZS46 218 aa9.18□□□□□ -0.94
ERBB2-218ENST00000584450 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
ERBB2-218ENST00000584450 YAE1D1Q9NRH1 226 aa9.18□□□□□ -0.94
ERBB2-218ENST00000584450 KLHL30-AS1Q8NEE0 82 aa9.17□□□□□ -0.94
ERBB2-218ENST00000584450 IGHV3-16A0A0C4DH30 117 aa9.17□□□□□ -0.94
ERBB2-218ENST00000584450 K7ERJ3 54 aa9.17□□□□□ -0.94
ERBB2-218ENST00000584450 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
ERBB2-218ENST00000584450 C10orf105Q8TEF2 133 aa9.17□□□□□ -0.94
ERBB2-218ENST00000584450 PHLDA1Q8WV24 401 aaPredicted RBP9.17□□□□□ -0.94
ERBB2-218ENST00000584450 JPT2Q9H910 190 aa9.17□□□□□ -0.94
ERBB2-218ENST00000584450 HOXA3O43365 443 aaPredicted RBP9.16□□□□□ -0.94
ERBB2-218ENST00000584450 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 SAMD5Q5TGI4 173 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 VCX2Q9H322 139 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 IGHV7-4-1A0A0J9YVY3 117 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 GAGE12BA1L429 117 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 CCL25O15444 150 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 NPC2P61916 151 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 SEC11AP67812 179 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 Q8N8P6 123 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 CHAC1Q9BUX1 264 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 Q5PR19 223 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
ERBB2-218ENST00000584450 TP53TG1Q9Y2A0 90 aa9.16□□□□□ -0.94
ERBB2-218ENST00000584450 NDUFS8O00217 210 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 OR9G4Q8NGQ1 327 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 Q96MF0 132 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 CD5LO43866 347 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 PPP1R17O96001 155 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 LGALS9BQ3B8N2 356 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 LGALS9CQ6DKI2 356 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 SMIM2Q9BVW6 85 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 SMPXQ9UHP9 88 aa9.15□□□□□ -0.94
ERBB2-218ENST00000584450 FSTL3O95633 263 aa9.15□□□□□ -0.95
ERBB2-218ENST00000584450 RNASE13Q5GAN3 156 aaKnown RBP9.14□□□□□ -0.95
ERBB2-218ENST00000584450 LINC01545Q5VT33 79 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 TMEM238LA0A1B0GVL6 79 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 SDHAF1A6NFY7 115 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 A6NJY4 79 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 H7C1H1 209 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 ZNF479Q96JC4 524 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 TRAV2A0A0B4J234 112 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 A0A1B0GWB2 263 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 K7EP13 123 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 RRN3P1Q2M238 152 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 URB1-AS1Q96HZ7 61 aa9.14□□□□□ -0.95
ERBB2-218ENST00000584450 ZFHX4Q86UP3 3567 aa9.13□□□□□ -0.95
ERBB2-218ENST00000584450 C16orf54Q6UWD8 224 aa9.13□□□□□ -0.95
ERBB2-218ENST00000584450 AGRNO00468 2067 aa9.13□□□□□ -0.95
ERBB2-218ENST00000584450 IGHV3-38A0A0C4DH36 116 aa9.13□□□□□ -0.95
ERBB2-218ENST00000584450 NSUN5P1Q3KNT7 163 aa9.13□□□□□ -0.95
ERBB2-218ENST00000584450 DUSP14O95147 198 aaKnown RBP9.13□□□□□ -0.95
ERBB2-218ENST00000584450 SLC25A16P16260 332 aa9.13□□□□□ -0.95
ERBB2-218ENST00000584450 STHQ8IWL8 128 aa9.13□□□□□ -0.95
ERBB2-218ENST00000584450 CD28P10747 220 aa9.12□□□□□ -0.95
ERBB2-218ENST00000584450 COTL1Q14019 142 aa9.12□□□□□ -0.95
ERBB2-218ENST00000584450 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
ERBB2-218ENST00000584450 VCYO14598 125 aa9.12□□□□□ -0.95
ERBB2-218ENST00000584450 CTRLP40313 264 aa9.12□□□□□ -0.95
ERBB2-218ENST00000584450 SLURP1P55000 103 aa9.12□□□□□ -0.95
ERBB2-218ENST00000584450 C20orf173Q96LM9 149 aa9.12□□□□□ -0.95
ERBB2-218ENST00000584450 HOXD3P31249 432 aaPredicted RBP9.11□□□□□ -0.95
ERBB2-218ENST00000584450 AMTNQ6UX39 209 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 TMEM190Q8WZ59 177 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 SPXQ9BT56 116 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 C11orf21Q9P2W6 132 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 TRGV2A0A075B6R0 118 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 F8W735 103 aaPredicted RBP9.11□□□□□ -0.95
ERBB2-218ENST00000584450 RPL35AP18077 110 aaKnown RBP9.11□□□□□ -0.95
ERBB2-218ENST00000584450 DSCR9P59020 149 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 Q8N976 141 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 PEMTQ9UBM1 199 aa9.11□□□□□ -0.95
ERBB2-218ENST00000584450 FLNBO75369 2602 aaKnown RBP9.11□□□□□ -0.95
ERBB2-218ENST00000584450 TRGV1A0A0A0MS02 117 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 TOMM7Q9P0U1 55 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 EDN2P20800 178 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 PLNP26678 52 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 CFHR3Q02985 330 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
ERBB2-218ENST00000584450 APRG1Q8IVJ8 170 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 CDKN1BP46527 198 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 RPL39P62891 51 aaKnown RBP9.1□□□□□ -0.95
ERBB2-218ENST00000584450 EBI3Q14213 229 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 Q8N6K4 173 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 MRAP2Q96G30 205 aa9.1□□□□□ -0.95
ERBB2-218ENST00000584450 ADARB2-AS1A8MUL3 147 aa9.09□□□□□ -0.95
ERBB2-218ENST00000584450 IGHG2P01859 326 aa9.09□□□□□ -0.95
ERBB2-218ENST00000584450 HIST2H2BCQ6DN03 193 aa9.09□□□□□ -0.95
ERBB2-218ENST00000584450 PRADC1Q9BSG0 188 aa9.09□□□□□ -0.95
ERBB2-218ENST00000584450 PRSS29PA6NIE9 313 aa9.09□□□□□ -0.95
ERBB2-218ENST00000584450 SAP30O75446 220 aa9.09□□□□□ -0.95
ERBB2-218ENST00000584450 AVPP01185 164 aa9.09□□□□□ -0.95
ERBB2-218ENST00000584450 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
ERBB2-218ENST00000584450 CST9LQ9H4G1 147 aa9.09□□□□□ -0.95
ERBB2-218ENST00000584450 IGHV1OR15-1A0A075B7D0 117 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms