RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TDRG1Q3Y452 100 aa10.9□□□□□ -0.66
SKA2-209ENST00000583976 CENPWQ5EE01 88 aa10.9□□□□□ -0.66
SKA2-209ENST00000583976 IBA57Q5T440 356 aaKnown RBP10.9□□□□□ -0.66
SKA2-209ENST00000583976 PRR27Q6MZM9 219 aa10.9□□□□□ -0.66
SKA2-209ENST00000583976 COX8CQ7Z4L0 72 aa10.9□□□□□ -0.66
SKA2-209ENST00000583976 C6orf223Q8N319 242 aa10.9□□□□□ -0.66
SKA2-209ENST00000583976 KCNS1Q96KK3 526 aa10.9□□□□□ -0.66
SKA2-209ENST00000583976 KRTAP1-5Q9BYS1 174 aa10.9□□□□□ -0.66
SKA2-209ENST00000583976 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
SKA2-209ENST00000583976 IGKV3D-20A0A0C4DH25 116 aa10.89□□□□□ -0.67
SKA2-209ENST00000583976 M0R036 132 aa10.89□□□□□ -0.67
SKA2-209ENST00000583976 MGST1P10620 155 aaKnown RBP10.89□□□□□ -0.67
SKA2-209ENST00000583976 GNG4P50150 75 aa10.89□□□□□ -0.67
SKA2-209ENST00000583976 ZNF674Q2M3X9 581 aa10.89□□□□□ -0.67
SKA2-209ENST00000583976 FAM162BQ5T6X4 162 aa10.89□□□□□ -0.67
SKA2-209ENST00000583976 Q6ZTI0 123 aa10.89□□□□□ -0.67
SKA2-209ENST00000583976 MLST8Q9BVC4 326 aa10.89□□□□□ -0.67
SKA2-209ENST00000583976 TMSB15BA0A087X1C1 80 aa10.88□□□□□ -0.67
SKA2-209ENST00000583976 IGHV3-16A0A0C4DH30 117 aa10.88□□□□□ -0.67
SKA2-209ENST00000583976 PGPEP1LA6NFU8 196 aa10.88□□□□□ -0.67
SKA2-209ENST00000583976 B4DEV8 164 aa10.88□□□□□ -0.67
SKA2-209ENST00000583976 ATP5G1P05496 136 aa10.88□□□□□ -0.67
SKA2-209ENST00000583976 RAB14P61106 215 aa10.88□□□□□ -0.67
SKA2-209ENST00000583976 IFITM2Q01629 132 aa10.88□□□□□ -0.67
SKA2-209ENST00000583976 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
SKA2-209ENST00000583976 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
SKA2-209ENST00000583976 TRBV20OR9-2A0A075B6H5 130 aa10.87□□□□□ -0.67
SKA2-209ENST00000583976 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
SKA2-209ENST00000583976 SPINK4O60575 86 aa10.87□□□□□ -0.67
SKA2-209ENST00000583976 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
SKA2-209ENST00000583976 PARLQ9H300 379 aa10.87□□□□□ -0.67
SKA2-209ENST00000583976 HERC1Q15751 4861 aa10.87□□□□□ -0.67
SKA2-209ENST00000583976 GRIFINA4D1Z8 144 aa10.86□□□□□ -0.67
SKA2-209ENST00000583976 CDK2AP2O75956 126 aa10.86□□□□□ -0.67
SKA2-209ENST00000583976 SRP19P09132 144 aaKnown RBP10.86□□□□□ -0.67
SKA2-209ENST00000583976 SRSF3P84103 164 aaKnown RBP10.86□□□□□ -0.67
SKA2-209ENST00000583976 TRGV2A0A075B6R0 118 aa10.85□□□□□ -0.67
SKA2-209ENST00000583976 KRBOX1C9JBD0 128 aa10.85□□□□□ -0.67
SKA2-209ENST00000583976 S100A4P26447 101 aaKnown RBP10.85□□□□□ -0.67
SKA2-209ENST00000583976 CCL18P55774 89 aa10.85□□□□□ -0.67
SKA2-209ENST00000583976 OR5I1Q13606 314 aa10.85□□□□□ -0.67
SKA2-209ENST00000583976 LINC00612Q8N6U2 182 aa10.85□□□□□ -0.67
SKA2-209ENST00000583976 SPXQ9BT56 116 aa10.85□□□□□ -0.67
SKA2-209ENST00000583976 TRAV26-1A0A087WT03 109 aa10.84□□□□□ -0.67
SKA2-209ENST00000583976 ASIPP42127 132 aa10.84□□□□□ -0.67
SKA2-209ENST00000583976 RPL19P84098 196 aaKnown RBP10.84□□□□□ -0.67
SKA2-209ENST00000583976 SPATA12Q7Z6I5 190 aa10.84□□□□□ -0.67
SKA2-209ENST00000583976 FAT1Q14517 4588 aa10.84□□□□□ -0.67
SKA2-209ENST00000583976 A0A0J9YY99 117 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 C9JCJ5 164 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 C9JQL5 133 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 M0R2P5 195 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 IGHV3-53P01767 116 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 RNASE3P12724 160 aaKnown RBP10.83□□□□□ -0.68
SKA2-209ENST00000583976 HOXA5P20719 270 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 PEA15Q15121 130 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 LINC01559Q495D7 138 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 OCC1Q8TAD7 63 aa10.83□□□□□ -0.68
SKA2-209ENST00000583976 DAZAP1Q96EP5 407 aaKnown RBP10.83□□□□□ -0.68
SKA2-209ENST00000583976 H3BVH4 76 aa10.82□□□□□ -0.68
SKA2-209ENST00000583976 KRTAP10-2P60368 255 aa10.82□□□□□ -0.68
SKA2-209ENST00000583976 CLLU1Q5K131 121 aa10.82□□□□□ -0.68
SKA2-209ENST00000583976 SMIM12Q96EX1 92 aa10.82□□□□□ -0.68
SKA2-209ENST00000583976 C9orf85Q96MD7 179 aa10.82□□□□□ -0.68
SKA2-209ENST00000583976 SMIM7Q9BQ49 75 aa10.82□□□□□ -0.68
SKA2-209ENST00000583976 ZNF727A8MUV8 499 aa10.81□□□□□ -0.68
SKA2-209ENST00000583976 K7EN84 100 aa10.81□□□□□ -0.68
SKA2-209ENST00000583976 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
SKA2-209ENST00000583976 ZNF876PQ49A33 203 aa10.81□□□□□ -0.68
SKA2-209ENST00000583976 C19orf71A6NCJ1 209 aa10.8□□□□□ -0.68
SKA2-209ENST00000583976 NDUFS6O75380 124 aaKnown RBP10.8□□□□□ -0.68
SKA2-209ENST00000583976 RASL10AQ92737 203 aa10.8□□□□□ -0.68
SKA2-209ENST00000583976 Q9H8V8 135 aa10.8□□□□□ -0.68
SKA2-209ENST00000583976 BIN3Q9NQY0 253 aa10.8□□□□□ -0.68
SKA2-209ENST00000583976 SFTA3P0C7M3 94 aa10.79□□□□□ -0.68
SKA2-209ENST00000583976 NUDT10Q8NFP7 164 aa10.79□□□□□ -0.68
SKA2-209ENST00000583976 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
SKA2-209ENST00000583976 NUDT11Q96G61 164 aa10.79□□□□□ -0.68
SKA2-209ENST00000583976 RNASE7Q9H1E1 156 aaKnown RBP10.79□□□□□ -0.68
SKA2-209ENST00000583976 IL36BQ9NZH7 164 aa10.79□□□□□ -0.68
SKA2-209ENST00000583976 P01737 135 aa10.78□□□□□ -0.68
SKA2-209ENST00000583976 GZMBP10144 247 aa10.78□□□□□ -0.68
SKA2-209ENST00000583976 ESRGQ1W209 222 aa10.78□□□□□ -0.68
SKA2-209ENST00000583976 TTC32Q5I0X7 151 aa10.78□□□□□ -0.68
SKA2-209ENST00000583976 DNLZQ5SXM8 178 aa10.78□□□□□ -0.68
SKA2-209ENST00000583976 ZNF479Q96JC4 524 aa10.78□□□□□ -0.68
SKA2-209ENST00000583976 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
SKA2-209ENST00000583976 SMDT1Q9H4I9 107 aa10.78□□□□□ -0.68
SKA2-209ENST00000583976 FUSP35637 526 aaKnown RBP eCLIP10.77□□□□□ -0.69
SKA2-209ENST00000583976 SSTP61278 116 aa10.77□□□□□ -0.69
SKA2-209ENST00000583976 DMRTA1Q5VZB9 504 aa10.77□□□□□ -0.69
SKA2-209ENST00000583976 Q8N1X5 172 aa10.77□□□□□ -0.69
SKA2-209ENST00000583976 OR4C5Q8NGB2 326 aa10.77□□□□□ -0.69
SKA2-209ENST00000583976 UPK3BQ9BT76 320 aa10.77□□□□□ -0.69
SKA2-209ENST00000583976 SCRT2Q9NQ03 307 aa10.77□□□□□ -0.69
SKA2-209ENST00000583976 PHLDA3Q9Y5J5 127 aa10.77□□□□□ -0.69
SKA2-209ENST00000583976 MUC21A0A0G2JKD1 596 aa10.76□□□□□ -0.69
SKA2-209ENST00000583976 MUC21A0A140T8X8 626 aa10.76□□□□□ -0.69
SKA2-209ENST00000583976 M0R381 172 aa10.76□□□□□ -0.69
SKA2-209ENST00000583976 TMEM241Q24JQ0 296 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms