RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 Q6ZR54 194 aa17.32■□□□□ 0.36
TSEN54-209ENST00000583454 MED9Q9NWA0 146 aa17.32■□□□□ 0.36
TSEN54-209ENST00000583454 FHL2Q14192 279 aa17.31■□□□□ 0.36
TSEN54-209ENST00000583454 RBFOX3A6NFN3 312 aa17.3■□□□□ 0.36
TSEN54-209ENST00000583454 PRSS29PA6NIE9 313 aa17.3■□□□□ 0.36
TSEN54-209ENST00000583454 M0R036 132 aa17.3■□□□□ 0.36
TSEN54-209ENST00000583454 IGHV3-53P01767 116 aa17.3■□□□□ 0.36
TSEN54-209ENST00000583454 ZNF876PQ49A33 203 aa17.3■□□□□ 0.36
TSEN54-209ENST00000583454 CENPWQ5EE01 88 aa17.3■□□□□ 0.36
TSEN54-209ENST00000583454 TEX261Q6UWH6 196 aa17.3■□□□□ 0.36
TSEN54-209ENST00000583454 VSIG2Q96IQ7 327 aa17.3■□□□□ 0.36
TSEN54-209ENST00000583454 A0A0J9YY99 117 aa17.29■□□□□ 0.36
TSEN54-209ENST00000583454 RAB19A4D1S5 217 aa17.29■□□□□ 0.36
TSEN54-209ENST00000583454 NUDT3O95989 172 aa17.29■□□□□ 0.36
TSEN54-209ENST00000583454 IGLV2-8P01709 118 aa17.29■□□□□ 0.36
TSEN54-209ENST00000583454 ASIPP42127 132 aa17.29■□□□□ 0.36
TSEN54-209ENST00000583454 ZNF479Q96JC4 524 aa17.29■□□□□ 0.36
TSEN54-209ENST00000583454 IL36BQ9NZH7 164 aa17.29■□□□□ 0.36
TSEN54-209ENST00000583454 TRAV4A0A0B4J268 109 aa17.28■□□□□ 0.36
TSEN54-209ENST00000583454 S100A4P26447 101 aaKnown RBP17.28■□□□□ 0.36
TSEN54-209ENST00000583454 SLAQ13239 276 aa17.28■□□□□ 0.36
TSEN54-209ENST00000583454 RNF212Q495C1 297 aa17.28■□□□□ 0.36
TSEN54-209ENST00000583454 ZNF506Q5JVG8 444 aa17.28■□□□□ 0.36
TSEN54-209ENST00000583454 SMIM12Q96EX1 92 aa17.28■□□□□ 0.36
TSEN54-209ENST00000583454 ABCA13Q86UQ4 5058 aa17.28■□□□□ 0.36
TSEN54-209ENST00000583454 PGPEP1LA6NFU8 196 aa17.27■□□□□ 0.36
TSEN54-209ENST00000583454 C9JCJ5 164 aa17.27■□□□□ 0.36
TSEN54-209ENST00000583454 SFTA3P0C7M3 94 aa17.27■□□□□ 0.36
TSEN54-209ENST00000583454 PRO0255Q9UI72 69 aa17.27■□□□□ 0.36
TSEN54-209ENST00000583454 TRBV20OR9-2A0A075B6H5 130 aa17.26■□□□□ 0.35
TSEN54-209ENST00000583454 IGLV2-18A0A075B6J9 118 aa17.26■□□□□ 0.35
TSEN54-209ENST00000583454 GRIFINA4D1Z8 144 aa17.26■□□□□ 0.35
TSEN54-209ENST00000583454 GNG4P50150 75 aa17.26■□□□□ 0.35
TSEN54-209ENST00000583454 OR4C5Q8NGB2 326 aa17.26■□□□□ 0.35
TSEN54-209ENST00000583454 HHLA3Q9XRX5 114 aa17.26■□□□□ 0.35
TSEN54-209ENST00000583454 TMSB15BA0A087X1C1 80 aa17.25■□□□□ 0.35
TSEN54-209ENST00000583454 TMEM250H0YL14 139 aa17.25■□□□□ 0.35
TSEN54-209ENST00000583454 CRYBA4P53673 196 aa17.25■□□□□ 0.35
TSEN54-209ENST00000583454 PIK3CD-AS1Q5SR53 167 aa17.25■□□□□ 0.35
TSEN54-209ENST00000583454 UBE2DNLQ8IWF7 75 aa17.25■□□□□ 0.35
TSEN54-209ENST00000583454 SCRT2Q9NQ03 307 aa17.25■□□□□ 0.35
TSEN54-209ENST00000583454 H3BVH4 76 aa17.24■□□□□ 0.35
TSEN54-209ENST00000583454 RS1O15537 224 aa17.24■□□□□ 0.35
TSEN54-209ENST00000583454 PAX4O43316 350 aa17.24■□□□□ 0.35
TSEN54-209ENST00000583454 ARMS2P0C7Q2 107 aa17.24■□□□□ 0.35
TSEN54-209ENST00000583454 PRR27Q6MZM9 219 aa17.24■□□□□ 0.35
TSEN54-209ENST00000583454 TRGV4A0A0C4DH28 118 aa17.23■□□□□ 0.35
TSEN54-209ENST00000583454 NDUFS6O75380 124 aaKnown RBP17.23■□□□□ 0.35
TSEN54-209ENST00000583454 CXCL1P09341 107 aa17.23■□□□□ 0.35
TSEN54-209ENST00000583454 CFAP126Q5VTH2 177 aa17.23■□□□□ 0.35
TSEN54-209ENST00000583454 FAM210AQ96ND0 272 aa17.23■□□□□ 0.35
TSEN54-209ENST00000583454 CIDEAO60543 219 aa17.22■□□□□ 0.35
TSEN54-209ENST00000583454 RPL19P84098 196 aaKnown RBP17.22■□□□□ 0.35
TSEN54-209ENST00000583454 TOR2AQ5JU69 321 aa17.22■□□□□ 0.35
TSEN54-209ENST00000583454 HSPG2P98160 4391 aa17.21■□□□□ 0.35
TSEN54-209ENST00000583454 A0A096LPF7 62 aa17.21■□□□□ 0.35
TSEN54-209ENST00000583454 MED14OSP0DP75 135 aa17.21■□□□□ 0.35
TSEN54-209ENST00000583454 MGST1P10620 155 aaKnown RBP17.21■□□□□ 0.35
TSEN54-209ENST00000583454 C19orf71A6NCJ1 209 aa17.2■□□□□ 0.34
TSEN54-209ENST00000583454 FAM3BP58499 235 aaPredicted RBP17.2■□□□□ 0.34
TSEN54-209ENST00000583454 PCNPQ8WW12 178 aaKnown RBP17.2■□□□□ 0.34
TSEN54-209ENST00000583454 EIF5A2Q9GZV4 153 aaKnown RBP17.2■□□□□ 0.34
TSEN54-209ENST00000583454 GATA1P15976 413 aaPredicted RBP17.19■□□□□ 0.34
TSEN54-209ENST00000583454 CCL18P55774 89 aa17.19■□□□□ 0.34
TSEN54-209ENST00000583454 DMRTA1Q5VZB9 504 aa17.19■□□□□ 0.34
TSEN54-209ENST00000583454 PARLQ9H300 379 aa17.19■□□□□ 0.34
TSEN54-209ENST00000583454 BIN3Q9NQY0 253 aa17.19■□□□□ 0.34
TSEN54-209ENST00000583454 LRP1BQ9NZR2 4599 aa17.18■□□□□ 0.34
TSEN54-209ENST00000583454 A8MWV9 139 aa17.18■□□□□ 0.34
TSEN54-209ENST00000583454 LINC00588Q9Y4M8 146 aa17.18■□□□□ 0.34
TSEN54-209ENST00000583454 PHLDA3Q9Y5J5 127 aa17.18■□□□□ 0.34
TSEN54-209ENST00000583454 ICOSQ9Y6W8 199 aa17.18■□□□□ 0.34
TSEN54-209ENST00000583454 SYT8Q8NBV8 401 aa17.17■□□□□ 0.34
TSEN54-209ENST00000583454 OCC1Q8TAD7 63 aa17.17■□□□□ 0.34
TSEN54-209ENST00000583454 DAZAP1Q96EP5 407 aaKnown RBP17.17■□□□□ 0.34
TSEN54-209ENST00000583454 SSBP4Q9BWG4 385 aaPredicted RBP17.17■□□□□ 0.34
TSEN54-209ENST00000583454 ESRGQ1W209 222 aa17.16■□□□□ 0.34
TSEN54-209ENST00000583454 ZFP2Q6ZN57 461 aa17.16■□□□□ 0.34
TSEN54-209ENST00000583454 MRPL23Q16540 153 aaKnown RBP17.15■□□□□ 0.34
TSEN54-209ENST00000583454 JPT2Q9H910 190 aa17.15■□□□□ 0.34
TSEN54-209ENST00000583454 K7EN84 100 aa17.14■□□□□ 0.33
TSEN54-209ENST00000583454 SNAI2O43623 268 aa17.14■□□□□ 0.33
TSEN54-209ENST00000583454 SRP19P09132 144 aaKnown RBP17.14■□□□□ 0.33
TSEN54-209ENST00000583454 OR5AL1P0C617 328 aa17.14■□□□□ 0.33
TSEN54-209ENST00000583454 UFSP1Q6NVU6 142 aa17.14■□□□□ 0.33
TSEN54-209ENST00000583454 ZFP82Q8N141 532 aa17.14■□□□□ 0.33
TSEN54-209ENST00000583454 K7EQD1 137 aa17.13■□□□□ 0.33
TSEN54-209ENST00000583454 NXPH4O95158 308 aa17.13■□□□□ 0.33
TSEN54-209ENST00000583454 P01737 135 aa17.13■□□□□ 0.33
TSEN54-209ENST00000583454 GYPEP15421 78 aa17.13■□□□□ 0.33
TSEN54-209ENST00000583454 RPS20P60866 119 aaKnown RBP17.13■□□□□ 0.33
TSEN54-209ENST00000583454 OR2D3Q8NGH3 330 aa17.13■□□□□ 0.33
TSEN54-209ENST00000583454 ZNRF2Q8NHG8 242 aa17.13■□□□□ 0.33
TSEN54-209ENST00000583454 SFRP2Q96HF1 295 aa17.13■□□□□ 0.33
TSEN54-209ENST00000583454 IGHV3-73A0A0B4J1V6 119 aa17.12■□□□□ 0.33
TSEN54-209ENST00000583454 TRBV6-4A0A1B0GX49 114 aa17.12■□□□□ 0.33
TSEN54-209ENST00000583454 M0R381 172 aa17.12■□□□□ 0.33
TSEN54-209ENST00000583454 C1orf134Q5TEV5 83 aa17.12■□□□□ 0.33
TSEN54-209ENST00000583454 SLC25A29Q8N8R3 303 aa17.12■□□□□ 0.33
TSEN54-209ENST00000583454 NUDT10Q8NFP7 164 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms