RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SPATA12Q7Z6I5 190 aa13.58□□□□□ -0.24
LIMD2-209ENST00000580222 RNASE8Q8TDE3 154 aaKnown RBP13.58□□□□□ -0.24
LIMD2-209ENST00000580222 C11orf21Q9P2W6 132 aa13.58□□□□□ -0.24
LIMD2-209ENST00000580222 TP53TG3Q9ULZ0 132 aa13.58□□□□□ -0.24
LIMD2-209ENST00000580222 SNURFLB1AK76 121 aa13.57□□□□□ -0.24
LIMD2-209ENST00000580222 ORM1P02763 201 aa13.57□□□□□ -0.24
LIMD2-209ENST00000580222 ZNF415Q09FC8 603 aa13.57□□□□□ -0.24
LIMD2-209ENST00000580222 BIN3Q9NQY0 253 aa13.57□□□□□ -0.24
LIMD2-209ENST00000580222 M0R036 132 aa13.56□□□□□ -0.24
LIMD2-209ENST00000580222 TYMSP04818 313 aa13.56□□□□□ -0.24
LIMD2-209ENST00000580222 INAFM2P0DMQ5 153 aa13.56□□□□□ -0.24
LIMD2-209ENST00000580222 KRTAP10-2P60368 255 aa13.56□□□□□ -0.24
LIMD2-209ENST00000580222 TDRG1Q3Y452 100 aa13.56□□□□□ -0.24
LIMD2-209ENST00000580222 FAM74A3Q4VXF1 159 aa13.56□□□□□ -0.24
LIMD2-209ENST00000580222 FAM210BQ96KR6 192 aa13.56□□□□□ -0.24
LIMD2-209ENST00000580222 LINC00862A6NCI5 91 aa13.55□□□□□ -0.24
LIMD2-209ENST00000580222 B4DEV8 164 aa13.55□□□□□ -0.24
LIMD2-209ENST00000580222 SFTA3P0C7M3 94 aa13.55□□□□□ -0.24
LIMD2-209ENST00000580222 SPART-AS1P0CW21 52 aa13.55□□□□□ -0.24
LIMD2-209ENST00000580222 IBA57Q5T440 356 aaKnown RBP13.55□□□□□ -0.24
LIMD2-209ENST00000580222 UQCC3Q6UW78 93 aa13.55□□□□□ -0.24
LIMD2-209ENST00000580222 C6orf223Q8N319 242 aa13.55□□□□□ -0.24
LIMD2-209ENST00000580222 OCC1Q8TAD7 63 aa13.55□□□□□ -0.24
LIMD2-209ENST00000580222 DAZAP1Q96EP5 407 aaKnown RBP13.55□□□□□ -0.24
LIMD2-209ENST00000580222 GSN-AS1Q9NRJ2 163 aa13.55□□□□□ -0.24
LIMD2-209ENST00000580222 IGKV3D-20A0A0C4DH25 116 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 PLAC8L1A1L4L8 177 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 EPM2AB3EWF7 344 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 K7EN84 100 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 GNRH2O43555 120 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 HTN3P15516 51 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 OR5I1Q13606 314 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
LIMD2-209ENST00000580222 TMSB15BA0A087X1C1 80 aa13.53□□□□□ -0.24
LIMD2-209ENST00000580222 NBDYA0A0U1RRE5 68 aa13.53□□□□□ -0.24
LIMD2-209ENST00000580222 TEX48A0A1B0GUV7 120 aa13.53□□□□□ -0.24
LIMD2-209ENST00000580222 TCL1AP56279 114 aa13.53□□□□□ -0.24
LIMD2-209ENST00000580222 LINC01559Q495D7 138 aa13.53□□□□□ -0.24
LIMD2-209ENST00000580222 FAM222AQ5U5X8 452 aa13.53□□□□□ -0.24
LIMD2-209ENST00000580222 C11orf72Q8NBR9 251 aa13.53□□□□□ -0.24
LIMD2-209ENST00000580222 NOP10Q9NPE3 64 aaKnown RBP13.53□□□□□ -0.24
LIMD2-209ENST00000580222 NAT8Q9UHE5 227 aa13.53□□□□□ -0.24
LIMD2-209ENST00000580222 TIMM8BQ9Y5J9 83 aaPredicted RBP13.53□□□□□ -0.24
LIMD2-209ENST00000580222 IGHV3-16A0A0C4DH30 117 aa13.52□□□□□ -0.25
LIMD2-209ENST00000580222 KRBOX1C9JBD0 128 aa13.52□□□□□ -0.25
LIMD2-209ENST00000580222 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
LIMD2-209ENST00000580222 TMEM241Q24JQ0 296 aa13.52□□□□□ -0.25
LIMD2-209ENST00000580222 MDFICQ9P1T7 246 aa13.52□□□□□ -0.25
LIMD2-209ENST00000580222 DKK2Q9UBU2 259 aa13.52□□□□□ -0.25
LIMD2-209ENST00000580222 C19orf71A6NCJ1 209 aa13.51□□□□□ -0.25
LIMD2-209ENST00000580222 LYRM9A8MSI8 78 aa13.51□□□□□ -0.25
LIMD2-209ENST00000580222 P01737 135 aa13.51□□□□□ -0.25
LIMD2-209ENST00000580222 S100A4P26447 101 aaKnown RBP13.51□□□□□ -0.25
LIMD2-209ENST00000580222 ASIPP42127 132 aa13.51□□□□□ -0.25
LIMD2-209ENST00000580222 LINC01551Q86U37 167 aa13.51□□□□□ -0.25
LIMD2-209ENST00000580222 ZNRF2Q8NHG8 242 aa13.51□□□□□ -0.25
LIMD2-209ENST00000580222 GRIFINA4D1Z8 144 aa13.5□□□□□ -0.25
LIMD2-209ENST00000580222 ADIRFQ15847 76 aa13.5□□□□□ -0.25
LIMD2-209ENST00000580222 FLG2Q5D862 2391 aaPredicted RBP13.49□□□□□ -0.25
LIMD2-209ENST00000580222 RPL23P62829 140 aaKnown RBP13.49□□□□□ -0.25
LIMD2-209ENST00000580222 DAZ2Q13117 558 aaKnown RBP13.49□□□□□ -0.25
LIMD2-209ENST00000580222 NUDT10Q8NFP7 164 aa13.49□□□□□ -0.25
LIMD2-209ENST00000580222 OR2D3Q8NGH3 330 aa13.49□□□□□ -0.25
LIMD2-209ENST00000580222 NUDT11Q96G61 164 aa13.49□□□□□ -0.25
LIMD2-209ENST00000580222 RNASE7Q9H1E1 156 aaKnown RBP13.49□□□□□ -0.25
LIMD2-209ENST00000580222 DAD1P61803 113 aa13.48□□□□□ -0.25
LIMD2-209ENST00000580222 SPXQ9BT56 116 aa13.48□□□□□ -0.25
LIMD2-209ENST00000580222 HMCN2Q8NDA2 5059 aa13.47□□□□□ -0.25
LIMD2-209ENST00000580222 TRGV1A0A0A0MS02 117 aa13.47□□□□□ -0.25
LIMD2-209ENST00000580222 H3BVH4 76 aa13.47□□□□□ -0.25
LIMD2-209ENST00000580222 CXCL1P09341 107 aa13.47□□□□□ -0.25
LIMD2-209ENST00000580222 DEFB130BP0DP73 79 aa13.47□□□□□ -0.25
LIMD2-209ENST00000580222 DEFB130AP0DP74 79 aa13.47□□□□□ -0.25
LIMD2-209ENST00000580222 FAM3BP58499 235 aaPredicted RBP13.47□□□□□ -0.25
LIMD2-209ENST00000580222 ERVFC1-1P60608 527 aa13.47□□□□□ -0.25
LIMD2-209ENST00000580222 RPS20P60866 119 aaKnown RBP13.47□□□□□ -0.25
LIMD2-209ENST00000580222 MRPL16Q9NX20 251 aaKnown RBP13.47□□□□□ -0.25
LIMD2-209ENST00000580222 GAGE12BA1L429 117 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 TMEM218A2RU14 115 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 XKRY2A2RUG3 117 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 F8W036 122 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 GATCO43716 136 aaKnown RBP13.46□□□□□ -0.25
LIMD2-209ENST00000580222 SPINK4O60575 86 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 GAGE7O76087 117 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 GAGE12FP0CL80 117 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 GAGE12GP0CL81 117 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 GAGE12IP0CL82 117 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 RNASE3P12724 160 aaKnown RBP13.46□□□□□ -0.25
LIMD2-209ENST00000580222 DNLZQ5SXM8 178 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 FAM231DQ6ZW35 169 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 ISOC2Q96AB3 205 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 C9orf85Q96MD7 179 aa13.46□□□□□ -0.25
LIMD2-209ENST00000580222 RPP21Q9H633 154 aaKnown RBP13.46□□□□□ -0.25
LIMD2-209ENST00000580222 Q6ZTI0 123 aa13.45□□□□□ -0.26
LIMD2-209ENST00000580222 IL36BQ9NZH7 164 aa13.45□□□□□ -0.26
LIMD2-209ENST00000580222 M0R2P5 195 aa13.44□□□□□ -0.26
LIMD2-209ENST00000580222 ARMS2P0C7Q2 107 aa13.44□□□□□ -0.26
LIMD2-209ENST00000580222 C15orf54Q8N8G6 183 aa13.44□□□□□ -0.26
LIMD2-209ENST00000580222 KRTAP1-5Q9BYS1 174 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms