RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 MEF2BQ02080 365 aaPredicted RBP9.2□□□□□ -0.94
TRAF4-214ENST00000580073 COX8CQ7Z4L0 72 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 NHLRC2Q8NBF2 726 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 FMC1Q96HJ9 113 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 GSN-AS1Q9NRJ2 163 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 MDFICQ9P1T7 246 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 VAX2Q9UIW0 290 aa9.2□□□□□ -0.94
TRAF4-214ENST00000580073 APOBP04114 4563 aaKnown RBP9.19□□□□□ -0.94
TRAF4-214ENST00000580073 RAB19A4D1S5 217 aa9.19□□□□□ -0.94
TRAF4-214ENST00000580073 RBFOX3A6NFN3 312 aa9.19□□□□□ -0.94
TRAF4-214ENST00000580073 FBLL1A6NHQ2 334 aaKnown RBP9.19□□□□□ -0.94
TRAF4-214ENST00000580073 RGS13O14921 159 aa9.19□□□□□ -0.94
TRAF4-214ENST00000580073 IGLV2-8P01709 118 aa9.19□□□□□ -0.94
TRAF4-214ENST00000580073 SAPCD1Q5SSQ6 148 aa9.19□□□□□ -0.94
TRAF4-214ENST00000580073 VSIG2Q96IQ7 327 aa9.19□□□□□ -0.94
TRAF4-214ENST00000580073 MLST8Q9BVC4 326 aa9.19□□□□□ -0.94
TRAF4-214ENST00000580073 PRO0255Q9UI72 69 aa9.19□□□□□ -0.94
TRAF4-214ENST00000580073 TRBV20OR9-2A0A075B6H5 130 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 TRAV21A0A0B4J279 112 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 NXPH4O95158 308 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 RPL35P42766 123 aaKnown RBP9.18□□□□□ -0.94
TRAF4-214ENST00000580073 UBE2G1P62253 170 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 ZNF415Q09FC8 603 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 SMUG1Q53HV7 270 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 ZNF506Q5JVG8 444 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 ZFP30Q9Y2G7 519 aa9.18□□□□□ -0.94
TRAF4-214ENST00000580073 IGKV3D-20A0A0C4DH25 116 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 SPINK4O60575 86 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 IFNA1P01562 189 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 TYMSP04818 313 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 PFN1P07737 140 aaKnown RBP9.17□□□□□ -0.94
TRAF4-214ENST00000580073 SRSF3P84103 164 aaKnown RBP9.17□□□□□ -0.94
TRAF4-214ENST00000580073 MRPL23Q16540 153 aaKnown RBP9.17□□□□□ -0.94
TRAF4-214ENST00000580073 TDRG1Q3Y452 100 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 TMEM183AQ8IXX5 376 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 FAM210AQ96ND0 272 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 TXNDC17Q9BRA2 123 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 NAGKQ9UJ70 344 aa9.17□□□□□ -0.94
TRAF4-214ENST00000580073 IGHV3-16A0A0C4DH30 117 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 PGPEP1LA6NFU8 196 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 C9JQL5 133 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 SH2D1AO60880 128 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 ZNF674Q2M3X9 581 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 Q6ZRN7 208 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-214ENST00000580073 NEGR1Q7Z3B1 354 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 BAGE2Q86Y30 109 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 FRZBQ92765 325 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 MED9Q9NWA0 146 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 LY96Q9Y6Y9 160 aa9.16□□□□□ -0.94
TRAF4-214ENST00000580073 PDE6DO43924 150 aa9.15□□□□□ -0.94
TRAF4-214ENST00000580073 S100A9P06702 114 aaKnown RBP9.15□□□□□ -0.94
TRAF4-214ENST00000580073 SRIP30626 198 aa9.15□□□□□ -0.94
TRAF4-214ENST00000580073 CENPWQ5EE01 88 aa9.15□□□□□ -0.94
TRAF4-214ENST00000580073 FAM159AQ6UWV7 190 aa9.15□□□□□ -0.94
TRAF4-214ENST00000580073 C10orf126Q8N4M7 172 aa9.15□□□□□ -0.94
TRAF4-214ENST00000580073 DNAH5Q8TE73 4624 aa9.15□□□□□ -0.94
TRAF4-214ENST00000580073 TRGV4A0A0C4DH28 118 aa9.14□□□□□ -0.95
TRAF4-214ENST00000580073 FABP5P3A8MUU1 101 aa9.14□□□□□ -0.95
TRAF4-214ENST00000580073 SRP19P09132 144 aaKnown RBP9.14□□□□□ -0.95
TRAF4-214ENST00000580073 EVI2AP22794 236 aa9.14□□□□□ -0.95
TRAF4-214ENST00000580073 TAGLN2P37802 199 aaKnown RBP9.14□□□□□ -0.95
TRAF4-214ENST00000580073 KRBOX1C9JBD0 128 aa9.13□□□□□ -0.95
TRAF4-214ENST00000580073 ORM1P02763 201 aa9.13□□□□□ -0.95
TRAF4-214ENST00000580073 RNASE3P12724 160 aaKnown RBP9.13□□□□□ -0.95
TRAF4-214ENST00000580073 CRYBA4P53673 196 aa9.13□□□□□ -0.95
TRAF4-214ENST00000580073 PARLQ9H300 379 aa9.13□□□□□ -0.95
TRAF4-214ENST00000580073 MRPL16Q9NX20 251 aaKnown RBP9.13□□□□□ -0.95
TRAF4-214ENST00000580073 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
TRAF4-214ENST00000580073 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 M0R036 132 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 IGHV3-53P01767 116 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 INAFM2P0DMQ5 153 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 RPL19P84098 196 aaKnown RBP9.12□□□□□ -0.95
TRAF4-214ENST00000580073 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 SH2D6Q7Z4S9 175 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 C9orf85Q96MD7 179 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 EIF5A2Q9GZV4 153 aaKnown RBP9.12□□□□□ -0.95
TRAF4-214ENST00000580073 SDF2L1Q9HCN8 221 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 MSRB1Q9NZV6 116 aa9.12□□□□□ -0.95
TRAF4-214ENST00000580073 TMSB15BA0A087X1C1 80 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 GRIFINA4D1Z8 144 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 C9JCJ5 164 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 TMEM250H0YL14 139 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 K7EN84 100 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 PRR27Q6MZM9 219 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 LYPD5Q6UWN5 251 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 OCC1Q8TAD7 63 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 KCNS1Q96KK3 526 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 SPXQ9BT56 116 aa9.11□□□□□ -0.95
TRAF4-214ENST00000580073 A0A087WTM6 91 aa9.1□□□□□ -0.95
TRAF4-214ENST00000580073 C19orf71A6NCJ1 209 aa9.1□□□□□ -0.95
TRAF4-214ENST00000580073 B4DEV8 164 aa9.1□□□□□ -0.95
TRAF4-214ENST00000580073 GNG4P50150 75 aa9.1□□□□□ -0.95
TRAF4-214ENST00000580073 Q5VSD8 79 aa9.1□□□□□ -0.95
TRAF4-214ENST00000580073 NDUFS6O75380 124 aaKnown RBP9.09□□□□□ -0.95
TRAF4-214ENST00000580073 MGST1P10620 155 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms