RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 C8orf17Q9NRJ1 99 aa6.89□□□□□ -1.31
PCAT18-201ENST00000579458 GOLGA4Q13439 2230 aaKnown RBP6.89□□□□□ -1.31
PCAT18-201ENST00000579458 ARHGAP21Q5T5U3 1957 aa6.89□□□□□ -1.31
PCAT18-201ENST00000579458 LY6G6EA0A0G2JKS1 128 aa6.89□□□□□ -1.31
PCAT18-201ENST00000579458 HERVK_113P61574 105 aa6.89□□□□□ -1.31
PCAT18-201ENST00000579458 NUP37Q8NFH4 326 aa6.89□□□□□ -1.31
PCAT18-201ENST00000579458 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
PCAT18-201ENST00000579458 LRP4O75096 1905 aa6.88□□□□□ -1.31
PCAT18-201ENST00000579458 NTN3O00634 580 aaPredicted RBP6.88□□□□□ -1.31
PCAT18-201ENST00000579458 PEBP1P30086 187 aaKnown RBP6.88□□□□□ -1.31
PCAT18-201ENST00000579458 CMTM2Q8TAZ6 248 aa6.88□□□□□ -1.31
PCAT18-201ENST00000579458 COL27A1Q8IZC6 1860 aaPredicted RBP6.88□□□□□ -1.31
PCAT18-201ENST00000579458 PROK1P58294 105 aa6.88□□□□□ -1.31
PCAT18-201ENST00000579458 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
PCAT18-201ENST00000579458 PRR4Q16378 134 aa6.88□□□□□ -1.31
PCAT18-201ENST00000579458 RPL7L1Q6DKI1 246 aaKnown RBP6.87□□□□□ -1.31
PCAT18-201ENST00000579458 NXT2Q9NPJ8 142 aaKnown RBP6.87□□□□□ -1.31
PCAT18-201ENST00000579458 BMPR1BO00238 502 aa6.87□□□□□ -1.31
PCAT18-201ENST00000579458 CCKP06307 115 aa6.87□□□□□ -1.31
PCAT18-201ENST00000579458 ASAH2BP0C7U1 165 aa6.87□□□□□ -1.31
PCAT18-201ENST00000579458 AQP3Q92482 292 aa6.87□□□□□ -1.31
PCAT18-201ENST00000579458 SPTSSAQ969W0 71 aa6.87□□□□□ -1.31
PCAT18-201ENST00000579458 SLC50A1Q9BRV3 221 aa6.87□□□□□ -1.31
PCAT18-201ENST00000579458 LOC400499M0QZD8 3231 aa6.87□□□□□ -1.31
PCAT18-201ENST00000579458 MED13Q9UHV7 2174 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 A0A087WW49 117 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 PRAC2D3DTV9 90 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 ATOX1O00244 68 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 IGHV3-7P01780 117 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 ODF3Q96PU9 254 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 ADAMTS20P59510 1910 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 KNTC1P50748 2209 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 IGHV3-74A0A0B4J1X5 117 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 IGHV3-72A0A0B4J1Y9 119 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 SPTY2D1-AS1A0A0U1RR47 76 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 RNASE2P10153 161 aaKnown RBP6.86□□□□□ -1.31
PCAT18-201ENST00000579458 SLC25A16P16260 332 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 GTSF1Q8WW33 167 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 SMG1Q96Q15 3661 aaKnown RBP6.86□□□□□ -1.31
PCAT18-201ENST00000579458 ASXL3Q9C0F0 2248 aa6.86□□□□□ -1.31
PCAT18-201ENST00000579458 TRAV2A0A0B4J234 112 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 C16orf47Q6ZP98 133 aaPredicted RBP6.85□□□□□ -1.31
PCAT18-201ENST00000579458 FAM168AQ92567 244 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 U3KQA8 63 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 DSPP15924 2871 aaKnown RBP6.85□□□□□ -1.31
PCAT18-201ENST00000579458 NBEAQ8NFP9 2946 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 TRAV17A0A0B4J275 112 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 B4DSR2 109 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 CKS2P33552 79 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 KRTDAPP60985 99 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 ZNF345Q14585 488 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 ZFP2Q6ZN57 461 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 MIR17HGQ75NE6 70 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 SIGLECL1Q8N7X8 197 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 ZNF414Q96IQ9 312 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 RP1P56715 2156 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 PKD1L2Q7Z442 2459 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 CHD6Q8TD26 2715 aa6.85□□□□□ -1.31
PCAT18-201ENST00000579458 IGLV4-3A0A075B6K6 122 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 C17orf51A8MQB3 221 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 CFC1BP0CG36 223 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 C5orf38Q86SI9 138 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 TMEM256Q8N2U0 113 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 APC2O95996 2303 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 IGHV3-35A0A0C4DH35 117 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 LOC107984156A0A0G2JMH3 177 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 PIRTP0C851 137 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 CCL4P13236 92 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 LUZP6Q538Z0 58 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 ARL17AQ8IVW1 177 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 C8orf49Q96NF6 230 aa6.84□□□□□ -1.31
PCAT18-201ENST00000579458 ACACAQ13085 2346 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 IGLV3-12A0A075B6K2 115 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 IGHV4-30-2A0A087WSY4 118 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 FXYD6-FXYD2A0A087WZ82 144 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 C3orf84H3BNL1 204 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 CCL8P80075 99 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 CHCHD1Q96BP2 118 aaKnown RBP6.83□□□□□ -1.32
PCAT18-201ENST00000579458 FXYD6Q9H0Q3 95 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 ANKRD11Q6UB99 2663 aaPredicted RBP6.83□□□□□ -1.32
PCAT18-201ENST00000579458 URB1O60287 2271 aaKnown RBP6.83□□□□□ -1.32
PCAT18-201ENST00000579458 KANTRA0A1W2PQU2 76 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 CCL3P10147 92 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 DEFB133Q30KQ1 61 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 CFAP126Q5VTH2 177 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 FAM53AQ6NSI3 398 aaPredicted RBP6.83□□□□□ -1.32
PCAT18-201ENST00000579458 FAM216BQ8N7L0 139 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 TAS2R4Q9NYW5 299 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 KIF26BQ2KJY2 2108 aa6.83□□□□□ -1.32
PCAT18-201ENST00000579458 MRPL51Q4U2R6 128 aaKnown RBP6.82□□□□□ -1.32
PCAT18-201ENST00000579458 NCBP2-AS2Q69YL0 99 aa6.82□□□□□ -1.32
PCAT18-201ENST00000579458 ITPR1Q14643 2758 aa6.82□□□□□ -1.32
PCAT18-201ENST00000579458 IGHV3OR16-10A0A075B7F0 116 aa6.82□□□□□ -1.32
PCAT18-201ENST00000579458 LINC01548A6NM66 108 aa6.82□□□□□ -1.32
PCAT18-201ENST00000579458 EFNA4P52798 201 aa6.82□□□□□ -1.32
PCAT18-201ENST00000579458 C19orf48Q6RUI8 117 aa6.82□□□□□ -1.32
PCAT18-201ENST00000579458 SMIM14Q96QK8 99 aa6.82□□□□□ -1.32
PCAT18-201ENST00000579458 IGKV1D-17A0A075B6S4 117 aa6.81□□□□□ -1.32
PCAT18-201ENST00000579458 LYPD2Q6UXB3 125 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms