RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 FHITP49789 147 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 XGP55808 180 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 UBE2L3P68036 154 aaKnown RBP2.63□□□□□ -1.99
NUP85-209ENST00000578987 BTN1A1Q13410 526 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 ICAM4Q14773 271 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 ZNF493Q6ZR52 646 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 Q6ZRN7 208 aaPredicted RBP2.63□□□□□ -1.99
NUP85-209ENST00000578987 C9orf47Q6ZRZ4 202 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 EXOC3-AS1Q8N2X6 119 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 LINC00612Q8N6U2 182 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 ZNF680Q8NEM1 530 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 FAM213BQ8TBF2 198 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 BLNKQ8WV28 456 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 DAZAP1Q96EP5 407 aaKnown RBP2.63□□□□□ -1.99
NUP85-209ENST00000578987 TXNDC17Q9BRA2 123 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 TCEAL7Q9BRU2 100 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 ALKBH7Q9BT30 221 aaPredicted RBP2.63□□□□□ -1.99
NUP85-209ENST00000578987 Q9H3A6 140 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 OTORQ9NRC9 128 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 EPDR1Q9UM22 224 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 MRPS16Q9Y3D3 137 aaKnown RBP2.63□□□□□ -1.99
NUP85-209ENST00000578987 LENEPQ9Y5L5 61 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 ARL2-SNX15V9GYD0 113 aa2.63□□□□□ -1.99
NUP85-209ENST00000578987 C7orf71A4D174 169 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 MAP1LC3B2A6NCE7 125 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 FAM74A7A6NL05 159 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 EPM2AB3EWF7 344 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 NPIPB6E9PJ23 425 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 F6UZH7 168 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 SIVA1O15304 175 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 HMGB3O15347 200 aaKnown RBP2.62□□□□□ -1.99
NUP85-209ENST00000578987 PAX4O43316 350 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 NDUFS6O75380 124 aaKnown RBP2.62□□□□□ -1.99
NUP85-209ENST00000578987 NXPH4O95158 308 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 SFTA3P0C7M3 94 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 LEPP41159 167 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 KRTAP10-1P60331 282 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 SNRPEP62304 92 aaKnown RBP2.62□□□□□ -1.99
NUP85-209ENST00000578987 CCL20P78556 96 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 GAGE2BQ13066 116 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 DAZ2Q13117 558 aaKnown RBP2.62□□□□□ -1.99
NUP85-209ENST00000578987 FHL2Q14192 279 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 ANXA2RQ3ZCQ2 193 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 GAGE2EQ4V326 116 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 TTC32Q5I0X7 151 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 PRR9Q5T870 116 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 GAGE2AQ6NT46 116 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 LYPD5Q6UWN5 251 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 ALKAL2Q6UX46 152 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 C5orf17Q8NAS9 161 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 C11orf72Q8NBR9 251 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 CMTM2Q8TAZ6 248 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 HIST1H2BAQ96A08 127 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 C8orf49Q96NF6 230 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 ODF3Q96PU9 254 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 VGLL1Q99990 258 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 C20orf144Q9BQM9 153 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 PYGO2Q9BRQ0 406 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 UPK3BQ9BT76 320 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 MAP1LC3BQ9GZQ8 125 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 AGPAT4-IT1Q9H0P7 198 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 MRPL16Q9NX20 251 aaKnown RBP2.62□□□□□ -1.99
NUP85-209ENST00000578987 GAGE2DQ9UEU5 116 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 DNAH17Q9UFH2 4485 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 HERC2O95714 4834 aa2.62□□□□□ -1.99
NUP85-209ENST00000578987 TRGV11A0A075B6L2 103 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 IGKV2-40A0A087WW87 121 aaPredicted RBP2.61□□□□□ -1.99
NUP85-209ENST00000578987 LOC100131303A0A0U1RQF7 123 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 C9orf118A6NHY6 69 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 GGTLC3B5MD39 225 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 H3BNG1 76 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 PDE6DO43924 150 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 SPINK4O60575 86 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 EIF3GO75821 320 aaKnown RBP eCLIP2.61□□□□□ -1.99
NUP85-209ENST00000578987 IFNA1P01562 189 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 IGKV2D-40P01614 121 aaPredicted RBP2.61□□□□□ -1.99
NUP85-209ENST00000578987 TCRAP04437 139 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 GPX1P07203 203 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 CRISP2P16562 243 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 ZNF138P52744 262 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 CRYBA4P53673 196 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 FGF8P55075 233 aaPredicted RBP2.61□□□□□ -1.99
NUP85-209ENST00000578987 RAB14P61106 215 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 SRSF3P84103 164 aaKnown RBP2.61□□□□□ -1.99
NUP85-209ENST00000578987 COTL1Q14019 142 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 MUC21Q5SSG8 566 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 SAPCD1Q5SSQ6 148 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 TMEM78Q5T7P6 136 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 COX8CQ7Z4L0 72 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 WFDC10BQ8IUB3 73 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 EIF4E3Q8N5X7 224 aaKnown RBP2.61□□□□□ -1.99
NUP85-209ENST00000578987 ZNF479Q96JC4 524 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 FAM19A4Q96LR4 140 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 SMDT1Q9H4I9 107 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 MANBALQ9NQG1 85 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 ZNF492Q9P255 531 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 VAX2Q9UIW0 290 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 HHLA3Q9XRX5 114 aa2.61□□□□□ -1.99
NUP85-209ENST00000578987 ZFP30Q9Y2G7 519 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms