RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, human

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBB-208	ENST00000578706	TM4SF20	Q53R12	229 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	TCF24	Q7RTU0	167 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	TMEM256	Q8N2U0	113 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	GTSF1	Q8WW33	167 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	BORCS7	Q96B45	105 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	GSN-AS1	Q9NRJ2	163 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	IGHV3OR16-8	A0A075B7F1	116 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.57	□□□□□ -1.68
UBB-208	ENST00000578706	KIR2DL5B	A0A0G2JN68	375 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	KIR2DL5B	A0A0G2JPC4	375 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706		A0A1B0GUT8	65 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706		A0A1W2PS18	150 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	C16orf90	A8MZG2	172 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	IGLL5	B9A064	214 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706		M0R2N4	97 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	SERF1A	O75920	110 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	IGKV2D-40	P01614	121 aa	Predicted RBP	4.57	□□□□□ -1.68
UBB-208	ENST00000578706	INAFM2	P0DMQ5	153 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	GZMB	P10144	247 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	SRI	P30626	198 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	LINC00310	P59036	64 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	SLA	Q13239	276 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	IQCJ	Q1A5X6	159 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	LBH	Q53QV2	105 aa	Predicted RBP	4.57	□□□□□ -1.68
UBB-208	ENST00000578706	ANKRD39	Q53RE8	183 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	GDF5OS	Q5U4N7	250 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	TMEM61	Q8N0U2	210 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	KIR2DL5A	Q8N109	375 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	GATD1	Q8NB37	220 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	KIR2DL5B	Q8NHK3	375 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	GLMP	Q8WWB7	406 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	KCNS1	Q96KK3	526 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	PGLYRP4	Q96LB8	373 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.57	□□□□□ -1.68
UBB-208	ENST00000578706	TP53TG3	Q9ULZ0	132 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	SELENOK	Q9Y6D0	94 aa		4.57	□□□□□ -1.68
UBB-208	ENST00000578706	TMEM189	A5PLL7	270 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	LINC00587	B1AMM8	73 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706		K7EMT4	169 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	LGALS9	O00182	355 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	SH2D1A	O60880	128 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	APOH	P02749	345 aa	Predicted RBP	4.56	□□□□□ -1.68
UBB-208	ENST00000578706	EDN2	P20800	178 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	CAMP	P49913	170 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	CRIP1	P50238	77 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	KIAA1644	Q3SXP7	199 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	SAMD13	Q5VXD3	122 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	GPHB5	Q86YW7	130 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	C18orf32	Q8TCD1	76 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	C18orf15	Q96N68	181 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	C8orf49	Q96NF6	230 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	VGLL1	Q99990	258 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	SAMD10	Q9BYL1	202 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	LENEP	Q9Y5L5	61 aa		4.56	□□□□□ -1.68
UBB-208	ENST00000578706	TRAV8-2	A0A0B4J237	113 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	TRAV25	A0A0B4J276	109 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	FABP5P3	A8MUU1	101 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.55	□□□□□ -1.68
UBB-208	ENST00000578706	TSTD3	H0UI37	97 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	ZNF207	O43670	478 aa	Known RBP	4.55	□□□□□ -1.68
UBB-208	ENST00000578706	NUPR1	O60356	82 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	ZNF324	O75467	553 aa	Predicted RBP	4.55	□□□□□ -1.68
UBB-208	ENST00000578706	GPX1	P07203	203 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	HLA-DMB	P28068	263 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	CTRL	P40313	264 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	ZNF138	P52744	262 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	PKIA	P61925	76 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	HIST1H1A	Q02539	215 aa	Predicted RBP	4.55	□□□□□ -1.68
UBB-208	ENST00000578706	FAM106A	Q4KMX7	169 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	TMEM78	Q5T7P6	136 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	C9orf47	Q6ZRZ4	202 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	C16orf92	Q96LL3	132 aa		4.55	□□□□□ -1.68
UBB-208	ENST00000578706	DAZ1	Q9NQZ3	744 aa	Known RBP	4.55	□□□□□ -1.68
UBB-208	ENST00000578706	IGHV3OR16-13	A0A075B7E8	117 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	IGHV3-49	A0A0A0MS15	119 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	IGHV3-74	A0A0B4J1X5	117 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	IGHV3-66	A0A0C4DH42	116 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	IGHV7-4-1	A0A0J9YVY3	117 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	EPM2A	B3EWF7	344 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	PRAC2	D3DTV9	90 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706		F2Z2F3	143 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	SCGB1D1	O95968	90 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	GHRH	P01286	108 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	ARMS2	P0C7Q2	107 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	IGLC6	P0CF74	106 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	RBMY1C	P0DJD4	496 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	RPL35A	P18077	110 aa	Known RBP	4.54	□□□□□ -1.68
UBB-208	ENST00000578706	RAB4A	P20338	218 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	AMT	P48728	403 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	C21orf62-AS1	Q17RA5	79 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	IGFL4	Q6B9Z1	124 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	UNQ9165/PRO28630	Q6UXU0	137 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	ZNF493	Q6ZR52	646 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706		Q6ZR54	194 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	RNF182	Q8N6D2	247 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	OR11H2	Q8NH07	326 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706		Q8TAT8	98 aa		4.54	□□□□□ -1.68
UBB-208	ENST00000578706	CHCHD1	Q96BP2	118 aa	Known RBP	4.54	□□□□□ -1.68
UBB-208	ENST00000578706	LINC00477	Q96M19	166 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms