RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 BAALCQ8WXS3 180 aa13.8□□□□□ -0.2
TSEN54-205ENST00000578415 HMGB3O15347 200 aaKnown RBP13.79□□□□□ -0.2
TSEN54-205ENST00000578415 RAB2AP61019 212 aa13.79□□□□□ -0.2
TSEN54-205ENST00000578415 SERTAD4-AS1Q5TG53 156 aa13.79□□□□□ -0.2
TSEN54-205ENST00000578415 NDFIP1Q9BT67 221 aa13.79□□□□□ -0.2
TSEN54-205ENST00000578415 GAGE12JA6NER3 117 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 TAAR5O14804 337 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 GCGP01275 180 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 GAGE1Q13065 139 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 GAGE4Q13068 117 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 GAGE5Q13069 117 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 ACOT6Q3I5F7 207 aaPredicted RBP13.78□□□□□ -0.2
TSEN54-205ENST00000578415 GAGE13Q4V321 117 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 WFDC1Q9HC57 220 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 Q9UF83 564 aa13.78□□□□□ -0.2
TSEN54-205ENST00000578415 A0A1W2PPV4 95 aa13.77□□□□□ -0.21
TSEN54-205ENST00000578415 MPC2O95563 127 aa13.77□□□□□ -0.21
TSEN54-205ENST00000578415 PARLQ9H300 379 aa13.77□□□□□ -0.21
TSEN54-205ENST00000578415 FAT3Q8TDW7 4589 aa13.77□□□□□ -0.21
TSEN54-205ENST00000578415 SERTM2A0A1B0GWG4 89 aa13.76□□□□□ -0.21
TSEN54-205ENST00000578415 IGLV2-11P01706 119 aa13.76□□□□□ -0.21
TSEN54-205ENST00000578415 TCRAP04437 139 aa13.76□□□□□ -0.21
TSEN54-205ENST00000578415 RPL12P30050 165 aaKnown RBP13.76□□□□□ -0.21
TSEN54-205ENST00000578415 RGS21Q2M5E4 152 aa13.76□□□□□ -0.21
TSEN54-205ENST00000578415 TOR2AQ5JU69 321 aa13.76□□□□□ -0.21
TSEN54-205ENST00000578415 CHAC1Q9BUX1 264 aa13.76□□□□□ -0.21
TSEN54-205ENST00000578415 GGTLC3B5MD39 225 aa13.75□□□□□ -0.21
TSEN54-205ENST00000578415 ARL14EPLP0DKL9 152 aa13.75□□□□□ -0.21
TSEN54-205ENST00000578415 ZFP2Q6ZN57 461 aa13.75□□□□□ -0.21
TSEN54-205ENST00000578415 C5orf17Q8NAS9 161 aa13.75□□□□□ -0.21
TSEN54-205ENST00000578415 DNAJC30Q96LL9 226 aa13.75□□□□□ -0.21
TSEN54-205ENST00000578415 SH3BGRL3Q9H299 93 aa13.75□□□□□ -0.21
TSEN54-205ENST00000578415 PSG8Q9UQ74 426 aa13.75□□□□□ -0.21
TSEN54-205ENST00000578415 RBFOX3A6NFN3 312 aa13.74□□□□□ -0.21
TSEN54-205ENST00000578415 PTTG1O95997 202 aa13.74□□□□□ -0.21
TSEN54-205ENST00000578415 SYT8Q8NBV8 401 aa13.74□□□□□ -0.21
TSEN54-205ENST00000578415 COX11Q9Y6N1 276 aa13.74□□□□□ -0.21
TSEN54-205ENST00000578415 RNF222A6NCQ9 220 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 PET100P0DJ07 73 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 SMUG1Q53HV7 270 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 UFSP1Q6NVU6 142 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 CYB561D1Q8N8Q1 229 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 OR10G9Q8NGN4 311 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 OR10G7Q8NGN6 311 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 OR2T35Q8NGX2 323 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 CIRBP-AS1Q8TBR5 109 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 LINC00479Q96M42 142 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 SAMD10Q9BYL1 202 aa13.73□□□□□ -0.21
TSEN54-205ENST00000578415 UBR4Q5T4S7 5183 aa13.72□□□□□ -0.21
TSEN54-205ENST00000578415 A0A087WWC5 75 aa13.72□□□□□ -0.21
TSEN54-205ENST00000578415 A8MWV9 139 aa13.72□□□□□ -0.21
TSEN54-205ENST00000578415 OXTP01178 125 aa13.72□□□□□ -0.21
TSEN54-205ENST00000578415 FLI1Q01543 452 aaPredicted RBP13.72□□□□□ -0.21
TSEN54-205ENST00000578415 C14orf178Q8N769 122 aaPredicted RBP13.72□□□□□ -0.21
TSEN54-205ENST00000578415 Q8N976 141 aa13.72□□□□□ -0.21
TSEN54-205ENST00000578415 SUN5Q8TC36 379 aa13.72□□□□□ -0.21
TSEN54-205ENST00000578415 JPT2Q9H910 190 aa13.72□□□□□ -0.21
TSEN54-205ENST00000578415 IGKV3D-20A0A0C4DH25 116 aa13.71□□□□□ -0.21
TSEN54-205ENST00000578415 INMT-MINDY4F8WBC2 141 aa13.71□□□□□ -0.21
TSEN54-205ENST00000578415 STAG3L2P0CL84 134 aa13.71□□□□□ -0.21
TSEN54-205ENST00000578415 STAG3L3P0CL85 134 aa13.71□□□□□ -0.21
TSEN54-205ENST00000578415 PIK3CD-AS1Q5SR53 167 aa13.71□□□□□ -0.21
TSEN54-205ENST00000578415 PRNTQ86SH4 94 aa13.71□□□□□ -0.21
TSEN54-205ENST00000578415 IGKV2D-24A0A075B6R9 120 aa13.7□□□□□ -0.22
TSEN54-205ENST00000578415 K7EQM0 130 aa13.7□□□□□ -0.22
TSEN54-205ENST00000578415 CDC34P49427 236 aaPredicted RBP13.7□□□□□ -0.22
TSEN54-205ENST00000578415 LGALSLQ3ZCW2 172 aaPredicted RBP13.7□□□□□ -0.22
TSEN54-205ENST00000578415 ZFP69Q49AA0 526 aa13.7□□□□□ -0.22
TSEN54-205ENST00000578415 NIT1Q86X76 327 aa13.7□□□□□ -0.22
TSEN54-205ENST00000578415 RMI2Q96E14 147 aa13.7□□□□□ -0.22
TSEN54-205ENST00000578415 GCHFRP30047 84 aa13.69□□□□□ -0.22
TSEN54-205ENST00000578415 EPDR1Q9UM22 224 aa13.69□□□□□ -0.22
TSEN54-205ENST00000578415 FGF8P55075 233 aaPredicted RBP13.68□□□□□ -0.22
TSEN54-205ENST00000578415 SUMO1P63165 101 aaKnown RBP13.68□□□□□ -0.22
TSEN54-205ENST00000578415 KLK12Q9UKR0 248 aa13.68□□□□□ -0.22
TSEN54-205ENST00000578415 S100A4P26447 101 aaKnown RBP13.67□□□□□ -0.22
TSEN54-205ENST00000578415 RAB24Q969Q5 203 aa13.67□□□□□ -0.22
TSEN54-205ENST00000578415 MARVELD1Q9BSK0 173 aa13.67□□□□□ -0.22
TSEN54-205ENST00000578415 URGCP-MRPS24S4R325 110 aa13.67□□□□□ -0.22
TSEN54-205ENST00000578415 SSNA1O43805 119 aa13.66□□□□□ -0.22
TSEN54-205ENST00000578415 IGLV2-8P01709 118 aa13.66□□□□□ -0.22
TSEN54-205ENST00000578415 ASIPP42127 132 aa13.66□□□□□ -0.22
TSEN54-205ENST00000578415 SAPCD1Q5SSQ6 148 aa13.66□□□□□ -0.22
TSEN54-205ENST00000578415 DMRTA1Q5VZB9 504 aa13.66□□□□□ -0.22
TSEN54-205ENST00000578415 OR2G3Q8NGZ4 309 aa13.66□□□□□ -0.22
TSEN54-205ENST00000578415 UBE2WQ96B02 151 aa13.66□□□□□ -0.22
TSEN54-205ENST00000578415 PLA2G2DQ9UNK4 145 aa13.66□□□□□ -0.22
TSEN54-205ENST00000578415 SEC11BP0C7V7 166 aa13.65□□□□□ -0.22
TSEN54-205ENST00000578415 ATRAIDQ6UW56 229 aa13.65□□□□□ -0.22
TSEN54-205ENST00000578415 IL36BQ9NZH7 164 aa13.65□□□□□ -0.22
TSEN54-205ENST00000578415 PKHD1L1Q86WI1 4243 aa13.64□□□□□ -0.23
TSEN54-205ENST00000578415 HSD17B11Q8NBQ5 300 aa13.64□□□□□ -0.23
TSEN54-205ENST00000578415 TRAV34A0A0B4J273 112 aa13.63□□□□□ -0.23
TSEN54-205ENST00000578415 H3BVH4 76 aa13.63□□□□□ -0.23
TSEN54-205ENST00000578415 ARL2-SNX15V9GYD0 113 aa13.63□□□□□ -0.23
TSEN54-205ENST00000578415 FABP5P3A8MUU1 101 aa13.62□□□□□ -0.23
TSEN54-205ENST00000578415 RHODO00212 210 aa13.62□□□□□ -0.23
TSEN54-205ENST00000578415 CHCHD7Q9BUK0 85 aa13.62□□□□□ -0.23
TSEN54-205ENST00000578415 TMEM167BQ9NRX6 74 aa13.62□□□□□ -0.23
TSEN54-205ENST00000578415 A0A087WX48 190 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms