RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 TTTY13Q9BZ97 58 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 AGRNO00468 2067 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 MGPP08493 103 aa13.17□□□□□ -0.3
ERBB2-205ENST00000578199 BEX4Q9NWD9 120 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-205ENST00000578199 K7EMT4 169 aa13.17□□□□□ -0.3
ERBB2-205ENST00000578199 OCIAD2Q56VL3 154 aa13.17□□□□□ -0.3
ERBB2-205ENST00000578199 DEFB104AQ8WTQ1 72 aa13.17□□□□□ -0.3
ERBB2-205ENST00000578199 CST9LQ9H4G1 147 aa13.17□□□□□ -0.3
ERBB2-205ENST00000578199 IGKV2D-26A0A0A0MRZ7 120 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 C7orf71A4D174 169 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 BOD1L2Q8IYS8 172 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 OR1N2Q8NGR9 330 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 RASL10AQ92737 203 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 DPF1Q92782 380 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 HHLA3Q9XRX5 114 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 NAV2Q8IVL1 2488 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 TRAV12-3A0A0B4J271 114 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 DEFB125Q8N687 156 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 CUBNO60494 3623 aa13.16□□□□□ -0.3
ERBB2-205ENST00000578199 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
ERBB2-205ENST00000578199 JPT2Q9H910 190 aa13.15□□□□□ -0.3
ERBB2-205ENST00000578199 PRSS47A8MTI9 375 aa13.15□□□□□ -0.3
ERBB2-205ENST00000578199 APRG1Q8IVJ8 170 aa13.15□□□□□ -0.3
ERBB2-205ENST00000578199 TRAV12-2A0A075B6T6 113 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 VAMP3Q15836 100 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 GTSCR1Q86UQ5 136 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 MRAP2Q96G30 205 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 DPH3P1Q9H4G8 78 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 CR1P17927 2039 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 HOXA3O43365 443 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-205ENST00000578199 IGHV4-31P0DP07 118 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 ID1P41134 155 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 TMEM97Q5BJF2 176 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 MYOZ3Q8TDC0 251 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 SMIM2Q9BVW6 85 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 ZMAT4Q9H898 229 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 TMEM160Q9NX00 188 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 ZNF580Q9UK33 172 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 EPG5Q9HCE0 2579 aa13.14□□□□□ -0.31
ERBB2-205ENST00000578199 IGHV4OR15-8A0A075B7B6 117 aa13.13□□□□□ -0.31
ERBB2-205ENST00000578199 A0A087WW49 117 aa13.13□□□□□ -0.31
ERBB2-205ENST00000578199 IGKCP01834 107 aa13.13□□□□□ -0.31
ERBB2-205ENST00000578199 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
ERBB2-205ENST00000578199 VPREB3Q9UKI3 123 aa13.13□□□□□ -0.31
ERBB2-205ENST00000578199 KLLNB2CW77 178 aa13.13□□□□□ -0.31
ERBB2-205ENST00000578199 MRPL35Q9NZE8 188 aaKnown RBP13.13□□□□□ -0.31
ERBB2-205ENST00000578199 J3QLI3 93 aa13.12□□□□□ -0.31
ERBB2-205ENST00000578199 SUMO2P61956 95 aaKnown RBP13.12□□□□□ -0.31
ERBB2-205ENST00000578199 FAM159AQ6UWV7 190 aa13.12□□□□□ -0.31
ERBB2-205ENST00000578199 NEGR1Q7Z3B1 354 aa13.12□□□□□ -0.31
ERBB2-205ENST00000578199 APCP25054 2843 aa13.12□□□□□ -0.31
ERBB2-205ENST00000578199 C18orf65Q6ZTR6 163 aa13.12□□□□□ -0.31
ERBB2-205ENST00000578199 Q6YL49 198 aa13.11□□□□□ -0.31
ERBB2-205ENST00000578199 ZNF702PQ9H963 129 aa13.11□□□□□ -0.31
ERBB2-205ENST00000578199 TLN2Q9Y4G6 2542 aa13.11□□□□□ -0.31
ERBB2-205ENST00000578199 AKAP9Q99996 3911 aa13.11□□□□□ -0.31
ERBB2-205ENST00000578199 CREBBPQ92793 2442 aa13.11□□□□□ -0.31
ERBB2-205ENST00000578199 CD7P09564 240 aa13.11□□□□□ -0.31
ERBB2-205ENST00000578199 ZC2HC1BQ5TFG8 222 aa13.11□□□□□ -0.31
ERBB2-205ENST00000578199 DEFB136Q30KP8 78 aa13.1□□□□□ -0.31
ERBB2-205ENST00000578199 A0A087WWL8 130 aa13.1□□□□□ -0.31
ERBB2-205ENST00000578199 ATP5LO75964 103 aa13.1□□□□□ -0.31
ERBB2-205ENST00000578199 DPM2O94777 84 aa13.1□□□□□ -0.31
ERBB2-205ENST00000578199 HOXD3P31249 432 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-205ENST00000578199 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
ERBB2-205ENST00000578199 AP1S3Q96PC3 154 aa13.09□□□□□ -0.31
ERBB2-205ENST00000578199 TRBV7-9A0A0J9YWB2 115 aa13.09□□□□□ -0.31
ERBB2-205ENST00000578199 AMMECR1LQ6DCA0 310 aa13.09□□□□□ -0.31
ERBB2-205ENST00000578199 FSHBP01225 129 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 LGALS1P09382 135 aaKnown RBP13.08□□□□□ -0.32
ERBB2-205ENST00000578199 SPINK13Q1W4C9 94 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 Q5PR19 223 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 MDFICQ9P1T7 246 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 A0A0J9YX75 114 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 MED14OSP0DP75 135 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 LINC00315P59091 139 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 KIF25-AS1Q9Y6Z4 181 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 MYO9AB2RTY4 2548 aa13.08□□□□□ -0.32
ERBB2-205ENST00000578199 TRAV8-6A0A0B4J262 113 aa13.07□□□□□ -0.32
ERBB2-205ENST00000578199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-205ENST00000578199 K7EQG2 157 aa13.07□□□□□ -0.32
ERBB2-205ENST00000578199 OR9G4Q8NGQ1 327 aa13.07□□□□□ -0.32
ERBB2-205ENST00000578199 DUX3Q96PT4 197 aa13.07□□□□□ -0.32
ERBB2-205ENST00000578199 NAA38Q9BRA0 125 aaKnown RBP13.07□□□□□ -0.32
ERBB2-205ENST00000578199 SNRPD3P62318 126 aaKnown RBP13.07□□□□□ -0.32
ERBB2-205ENST00000578199 SCGB3A1Q96QR1 104 aa13.07□□□□□ -0.32
ERBB2-205ENST00000578199 NF1P21359 2839 aa13.06□□□□□ -0.32
ERBB2-205ENST00000578199 A0A087WX48 190 aa13.06□□□□□ -0.32
ERBB2-205ENST00000578199 TMEM89A2RUT3 159 aa13.06□□□□□ -0.32
ERBB2-205ENST00000578199 K7ERU9 68 aa13.06□□□□□ -0.32
ERBB2-205ENST00000578199 Q96MF0 132 aa13.06□□□□□ -0.32
ERBB2-205ENST00000578199 C20orf78Q9BR46 151 aa13.06□□□□□ -0.32
ERBB2-205ENST00000578199 SLURP1P55000 103 aa13.06□□□□□ -0.32
ERBB2-205ENST00000578199 DEFB113Q30KQ7 82 aa13.06□□□□□ -0.32
ERBB2-205ENST00000578199 F5H697 171 aa13.05□□□□□ -0.32
ERBB2-205ENST00000578199 ORMDL2Q53FV1 153 aa13.05□□□□□ -0.32
ERBB2-205ENST00000578199 FAM74A4Q5TZK3 123 aa13.05□□□□□ -0.32
ERBB2-205ENST00000578199 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms