RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TVP23CQ96ET8 276 aa9.44□□□□□ -0.9
SMARCD2-205ENST00000577686 PSG8Q9UQ74 426 aa9.44□□□□□ -0.9
SMARCD2-205ENST00000577686 FLG2Q5D862 2391 aaPredicted RBP9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 RHODO00212 210 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 MBP02144 154 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 H2BFSP57053 126 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 RAB2AP61019 212 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 FLI1Q01543 452 aaPredicted RBP9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 ELOBQ15370 118 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 LGALSLQ3ZCW2 172 aaPredicted RBP9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 Q6ZSA8 131 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 Q8N976 141 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 TMEM167BQ9NRX6 74 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
SMARCD2-205ENST00000577686 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 RBFOX3A6NFN3 312 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 PGPEP1LA6NFU8 196 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 UPK1BO75841 260 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 ASIPP42127 132 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 DEFA1P59665 94 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 DEFA3P59666 94 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 GAGE1Q13065 139 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 GAGE4Q13068 117 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 GAGE5Q13069 117 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 SERTAD4-AS1Q5TG53 156 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 CYB561D1Q8N8Q1 229 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 TMEM75Q8N9X5 138 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 SGK494Q96LW2 274 aa9.42□□□□□ -0.9
SMARCD2-205ENST00000577686 HMGB3O15347 200 aaKnown RBP9.41□□□□□ -0.9
SMARCD2-205ENST00000577686 EIF3GO75821 320 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCD2-205ENST00000577686 STAG3L2P0CL84 134 aa9.41□□□□□ -0.9
SMARCD2-205ENST00000577686 STAG3L3P0CL85 134 aa9.41□□□□□ -0.9
SMARCD2-205ENST00000577686 PRNTQ86SH4 94 aa9.41□□□□□ -0.9
SMARCD2-205ENST00000577686 PARLQ9H300 379 aa9.41□□□□□ -0.9
SMARCD2-205ENST00000577686 VPS13BQ7Z7G8 4022 aa9.41□□□□□ -0.9
SMARCD2-205ENST00000577686 LECT2O14960 151 aa9.4□□□□□ -0.9
SMARCD2-205ENST00000577686 CXorf1O96002 111 aa9.4□□□□□ -0.9
SMARCD2-205ENST00000577686 GCHFRP30047 84 aa9.4□□□□□ -0.9
SMARCD2-205ENST00000577686 C14orf177Q52M58 125 aa9.4□□□□□ -0.9
SMARCD2-205ENST00000577686 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
SMARCD2-205ENST00000577686 CHCHD7Q9BUK0 85 aa9.4□□□□□ -0.9
SMARCD2-205ENST00000577686 FAT1Q14517 4588 aa9.4□□□□□ -0.91
SMARCD2-205ENST00000577686 IGKV2D-24A0A075B6R9 120 aa9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 A0A087WX48 190 aa9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 ZNF80P51504 273 aaPredicted RBP9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 SUMO1P63165 101 aaKnown RBP9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 DAZ4Q86SG3 579 aaKnown RBP9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 MARVELD1Q9BSK0 173 aa9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 PSMG3Q9BT73 122 aaPredicted RBP9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 DAZ3Q9NR90 486 aaKnown RBP9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 C11orf21Q9P2W6 132 aa9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 EPDR1Q9UM22 224 aa9.39□□□□□ -0.91
SMARCD2-205ENST00000577686 FABP5P3A8MUU1 101 aa9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 LINC00694P0DN24 101 aa9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 SERF2P84101 59 aa9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 WFDC2Q14508 124 aa9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 OR2T35Q8NGX2 323 aa9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 RAB24Q969Q5 203 aa9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 ACTR3CQ9C0K3 210 aaPredicted RBP9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 MYCBP2O75592 4640 aa9.38□□□□□ -0.91
SMARCD2-205ENST00000577686 Q0VG73 95 aa9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 HSD17B11Q8NBQ5 300 aa9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 OR11H4Q8NGC9 324 aa9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 SUN5Q8TC36 379 aa9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 CHAC1Q9BUX1 264 aa9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 WFDC1Q9HC57 220 aa9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
SMARCD2-205ENST00000577686 A0A1W2PRE2 83 aa9.36□□□□□ -0.91
SMARCD2-205ENST00000577686 B4DEV8 164 aa9.36□□□□□ -0.91
SMARCD2-205ENST00000577686 OXTP01178 125 aa9.36□□□□□ -0.91
SMARCD2-205ENST00000577686 IFNA7P01567 189 aa9.36□□□□□ -0.91
SMARCD2-205ENST00000577686 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
SMARCD2-205ENST00000577686 NIT1Q86X76 327 aa9.36□□□□□ -0.91
SMARCD2-205ENST00000577686 LINC00479Q96M42 142 aa9.36□□□□□ -0.91
SMARCD2-205ENST00000577686 NKX6-2Q9C056 277 aaPredicted RBP9.36□□□□□ -0.91
SMARCD2-205ENST00000577686 RNF222A6NCQ9 220 aa9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 IGLV2-11P01706 119 aa9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 CRPP02741 224 aa9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 PKIAP61925 76 aa9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 RPL36AP83881 106 aaKnown RBP9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 FAM74A4Q5TZK3 123 aa9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 RPL36ALQ969Q0 106 aaKnown RBP9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 UBE2WQ96B02 151 aa9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 KLK12Q9UKR0 248 aa9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 TNFSF18Q9UNG2 199 aa9.35□□□□□ -0.91
SMARCD2-205ENST00000577686 TRBV10-1A0A0K0K1A3 114 aa9.34□□□□□ -0.91
SMARCD2-205ENST00000577686 H3BVH4 76 aa9.34□□□□□ -0.91
SMARCD2-205ENST00000577686 IGLV2-8P01709 118 aa9.34□□□□□ -0.91
SMARCD2-205ENST00000577686 TPT1P13693 172 aaKnown RBP9.34□□□□□ -0.91
SMARCD2-205ENST00000577686 Q8N3U1 123 aa9.34□□□□□ -0.91
SMARCD2-205ENST00000577686 C1orf43Q9BWL3 253 aa9.34□□□□□ -0.91
SMARCD2-205ENST00000577686 PHLDA3Q9Y5J5 127 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms