RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 KCNRGQ8N5I3 272 aa0.73□□□□□ -2.29
COPS3-213ENST00000577210 PPDPFLQ8WWR9 84 aa0.73□□□□□ -2.29
COPS3-213ENST00000577210 LINC00470Q9BZP3 86 aa0.73□□□□□ -2.29
COPS3-213ENST00000577210 TMEM191AQ9H0A3 160 aa0.73□□□□□ -2.29
COPS3-213ENST00000577210 MRPL35Q9NZE8 188 aaKnown RBP0.73□□□□□ -2.29
COPS3-213ENST00000577210 PTPRDP23468 1912 aa0.73□□□□□ -2.29
COPS3-213ENST00000577210 UNC13CQ8NB66 2214 aa0.73□□□□□ -2.29
COPS3-213ENST00000577210 MED13Q9UHV7 2174 aa0.73□□□□□ -2.29
COPS3-213ENST00000577210 CASP8AP2Q9UKL3 1982 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 TRPM7Q96QT4 1865 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 CDK5RAP2Q96SN8 1893 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 ADGRB1O14514 1584 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 NBDYA0A0U1RRE5 68 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 A0A1B0GV90 55 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 PITX3O75364 302 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 FREM3P0C091 2139 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 PIRTP0C851 137 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 RPL7L1Q6DKI1 246 aaKnown RBP0.72□□□□□ -2.29
COPS3-213ENST00000577210 XAF1Q6GPH4 301 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 IFI27L1Q96BM0 104 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 LINC00208Q96KT6 92 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 TMEM242Q9NWH2 141 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 NDUFA12Q9UI09 145 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 TANC2Q9HCD6 1990 aa0.72□□□□□ -2.29
COPS3-213ENST00000577210 ROCK2O75116 1388 aaKnown RBP0.71□□□□□ -2.3
COPS3-213ENST00000577210 CASZ1Q86V15 1759 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 A0A1W2PPM0 123 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 HIGD1CA8MV81 97 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 K7EP13 123 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 SNCGO76070 127 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 APOC1P02654 83 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 HIST1H1DP16402 221 aaKnown RBP0.71□□□□□ -2.3
COPS3-213ENST00000577210 CAV3P56539 151 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 EMX2Q04743 252 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 SPCS2Q15005 226 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 ZNF56Q15929 161 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 SPANXN1Q5VSR9 72 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 SLC48A1Q6P1K1 146 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 Q6ZS92 163 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 CYP2G1PQ6ZSU1 146 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 C5orf56Q8N8D9 126 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 C10orf82Q8WW14 230 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 SPTSSAQ969W0 71 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 SDF2Q99470 211 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 CCDC167Q9P0B6 97 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 MBD5Q9P267 1494 aa0.71□□□□□ -2.3
COPS3-213ENST00000577210 TMEM2Q9UHN6 1383 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 MUC4Q99102 2169 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 TRAV2A0A0B4J234 112 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 TRAV12-3A0A0B4J271 114 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 CXorf51AA0A1B0GTR3 108 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 EFCAB10A6NFE3 127 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 LY6G6CO95867 125 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 PIPP12273 146 aaPredicted RBP0.7□□□□□ -2.3
COPS3-213ENST00000577210 SPINT3P49223 89 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 NPC2P61916 151 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 SCIMPQ6UWF3 145 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 Q8N6K4 173 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 SPEF2Q9C093 1822 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 PEG3Q9GZU2 1588 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 TET1Q8NFU7 2136 aa0.7□□□□□ -2.3
COPS3-213ENST00000577210 RP1L1Q8IWN7 2480 aaPredicted RBP0.7□□□□□ -2.3
COPS3-213ENST00000577210 BCORL1Q5H9F3 1711 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 TECTAO75443 2155 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 EML5Q05BV3 1969 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 FAM92AA1XBS5 289 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 MIF4GDA9UHW6 222 aaKnown RBP0.69□□□□□ -2.3
COPS3-213ENST00000577210 SELENOWP63302 87 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 MEIG1Q5JSS6 88 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 OR2T2Q6IF00 324 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 SPTSSBQ8NFR3 76 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 TSKUQ8WUA8 353 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 C1orf54Q8WWF1 131 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 TMEM141Q96I45 108 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 SEC11CQ9BY50 192 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 BLMP54132 1417 aaPredicted RBP0.69□□□□□ -2.3
COPS3-213ENST00000577210 EEA1Q15075 1411 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 SMG6Q86US8 1419 aaKnown RBP0.69□□□□□ -2.3
COPS3-213ENST00000577210 DLG5Q8TDM6 1919 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 FANCMQ8IYD8 2048 aa0.69□□□□□ -2.3
COPS3-213ENST00000577210 KIF13AQ9H1H9 1805 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 TRAV12-2A0A075B6T6 113 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 LOC100130705A0A1B0GUX0 176 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 SPAARA0A1B0GVQ0 90 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 A6NIN4 97 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 H3BQF6 201 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 CCDC179H3BU77 68 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 UBE2G1P62253 170 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.68□□□□□ -2.3
COPS3-213ENST00000577210 DPH3Q96FX2 82 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 CGREF1Q99674 301 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 COL6A6A6NMZ7 2263 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 DLEC1Q9Y238 1755 aa0.68□□□□□ -2.3
COPS3-213ENST00000577210 CCDC180Q9P1Z9 1646 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 CFTRP13569 1480 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 TEX49A0A1B0GTD5 131 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 LINC00587B1AMM8 73 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 DLEU1O43261 78 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 SNAPC5O75971 98 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 NDUFB6O95139 128 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms