RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DNAH14Q0VDD8 3507 aa13.92□□□□□ -0.18
ATPAF1-214ENST00000576409 PIP4P2Q8N4L2 257 aa13.92□□□□□ -0.18
ATPAF1-214ENST00000576409 IGLL5B9A064 214 aa13.92□□□□□ -0.18
ATPAF1-214ENST00000576409 IGHV7-81A0A0B4J1V7 117 aa13.91□□□□□ -0.18
ATPAF1-214ENST00000576409 FGF6P10767 208 aa13.91□□□□□ -0.18
ATPAF1-214ENST00000576409 UBE2E1P51965 193 aa13.91□□□□□ -0.18
ATPAF1-214ENST00000576409 CELSR3Q9NYQ7 3312 aa13.91□□□□□ -0.18
ATPAF1-214ENST00000576409 BOD1L2Q8IYS8 172 aa13.91□□□□□ -0.18
ATPAF1-214ENST00000576409 PMVKQ15126 192 aa13.91□□□□□ -0.18
ATPAF1-214ENST00000576409 TIMM21Q9BVV7 248 aa13.91□□□□□ -0.18
ATPAF1-214ENST00000576409 DEFB131AP59861 70 aa13.9□□□□□ -0.18
ATPAF1-214ENST00000576409 MSRB2Q9Y3D2 182 aa13.9□□□□□ -0.18
ATPAF1-214ENST00000576409 CRYGCP07315 174 aa13.9□□□□□ -0.18
ATPAF1-214ENST00000576409 IGLV11-55A0A075B6I3 123 aa13.9□□□□□ -0.19
ATPAF1-214ENST00000576409 C10orf142B7Z368 130 aa13.9□□□□□ -0.19
ATPAF1-214ENST00000576409 GNLYP22749 145 aa13.9□□□□□ -0.19
ATPAF1-214ENST00000576409 IGFL2Q6UWQ7 119 aa13.9□□□□□ -0.19
ATPAF1-214ENST00000576409 DUSP14O95147 198 aaKnown RBP13.89□□□□□ -0.19
ATPAF1-214ENST00000576409 RBX1P62877 108 aa13.89□□□□□ -0.19
ATPAF1-214ENST00000576409 TRGV1A0A0A0MS02 117 aa13.89□□□□□ -0.19
ATPAF1-214ENST00000576409 COX6B1P14854 86 aa13.89□□□□□ -0.19
ATPAF1-214ENST00000576409 SIVA1O15304 175 aa13.89□□□□□ -0.19
ATPAF1-214ENST00000576409 PTH2Q96A98 100 aa13.89□□□□□ -0.19
ATPAF1-214ENST00000576409 CEP192Q8TEP8 1941 aa13.88□□□□□ -0.19
ATPAF1-214ENST00000576409 TMEM101Q96IK0 257 aa13.88□□□□□ -0.19
ATPAF1-214ENST00000576409 BUB3O43684 328 aa13.88□□□□□ -0.19
ATPAF1-214ENST00000576409 Q71RC1 249 aaPredicted RBP13.88□□□□□ -0.19
ATPAF1-214ENST00000576409 PLEKHB2Q96CS7 222 aa13.88□□□□□ -0.19
ATPAF1-214ENST00000576409 FANCD2OSQ96PS1 177 aa13.88□□□□□ -0.19
ATPAF1-214ENST00000576409 RPL39P62891 51 aaKnown RBP13.87□□□□□ -0.19
ATPAF1-214ENST00000576409 ODF1Q14990 250 aa13.87□□□□□ -0.19
ATPAF1-214ENST00000576409 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.87□□□□□ -0.19
ATPAF1-214ENST00000576409 J3QQQ9 107 aa13.87□□□□□ -0.19
ATPAF1-214ENST00000576409 CRIP1P50238 77 aa13.87□□□□□ -0.19
ATPAF1-214ENST00000576409 TRGV11A0A075B6L2 103 aa13.86□□□□□ -0.19
ATPAF1-214ENST00000576409 PRO1854Q9UHT4 67 aa13.86□□□□□ -0.19
ATPAF1-214ENST00000576409 LINC00158P58513 81 aa13.86□□□□□ -0.19
ATPAF1-214ENST00000576409 STHQ8IWL8 128 aa13.86□□□□□ -0.19
ATPAF1-214ENST00000576409 IGKV2D-26A0A0A0MRZ7 120 aa13.86□□□□□ -0.19
ATPAF1-214ENST00000576409 OR11H6Q8NGC7 330 aa13.86□□□□□ -0.19
ATPAF1-214ENST00000576409 HTN3P15516 51 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 FOXI2Q6ZQN5 318 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 PIP4P1Q86T03 277 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 CHCHD5Q9BSY4 110 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 XCL2Q9UBD3 114 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 TRBV20-1A0A075B6N2 111 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 BLCAPP62952 87 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 Q8N976 141 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 PPDPFLQ8WWR9 84 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 PRIMA1Q86XR5 153 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 C8orf31Q8N9H6 132 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 LY6G5BQ8NDX9 201 aa13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 NTN5Q8WTR8 489 aaPredicted RBP13.85□□□□□ -0.19
ATPAF1-214ENST00000576409 USMG5Q96IX5 58 aa13.84□□□□□ -0.19
ATPAF1-214ENST00000576409 JPT2Q9H910 190 aa13.84□□□□□ -0.19
ATPAF1-214ENST00000576409 ATXN8Q156A1 80 aa13.84□□□□□ -0.19
ATPAF1-214ENST00000576409 ATP6V0BQ99437 205 aa13.84□□□□□ -0.19
ATPAF1-214ENST00000576409 VCANP13611 3396 aa13.84□□□□□ -0.19
ATPAF1-214ENST00000576409 LINC01548A6NM66 108 aa13.84□□□□□ -0.19
ATPAF1-214ENST00000576409 FAM223BA6NKX1 122 aa13.83□□□□□ -0.2
ATPAF1-214ENST00000576409 FAM223AQ8IWN6 122 aa13.83□□□□□ -0.2
ATPAF1-214ENST00000576409 TMEM190Q8WZ59 177 aa13.83□□□□□ -0.2
ATPAF1-214ENST00000576409 K7ENP7 123 aa13.83□□□□□ -0.2
ATPAF1-214ENST00000576409 SLC25A20O43772 301 aa13.83□□□□□ -0.2
ATPAF1-214ENST00000576409 GAS8-AS1O95177 125 aa13.82□□□□□ -0.2
ATPAF1-214ENST00000576409 CFHR3Q02985 330 aa13.82□□□□□ -0.2
ATPAF1-214ENST00000576409 Q8N9W7 124 aa13.82□□□□□ -0.2
ATPAF1-214ENST00000576409 CPAMD8Q8IZJ3 1885 aa13.82□□□□□ -0.2
ATPAF1-214ENST00000576409 AGRNO00468 2067 aa13.82□□□□□ -0.2
ATPAF1-214ENST00000576409 TRGV4A0A0C4DH28 118 aa13.82□□□□□ -0.2
ATPAF1-214ENST00000576409 INS-IGF2F8WCM5 200 aa13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 RS1O15537 224 aa13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 GATD1Q8NB37 220 aa13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 NDUFA12Q9UI09 145 aa13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 IGHV1-69DA0A0B4J2H0 117 aa13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 IGHV1-69P01742 117 aa13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 IGF1P05019 195 aa13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 ZFP36P26651 326 aaKnown RBP13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 COPS9Q8WXC6 57 aa13.81□□□□□ -0.2
ATPAF1-214ENST00000576409 WI2-2373I1.2A0A1W2PRP0 233 aa13.8□□□□□ -0.2
ATPAF1-214ENST00000576409 PAX4O43316 350 aa13.8□□□□□ -0.2
ATPAF1-214ENST00000576409 HOXB4P17483 251 aaPredicted RBP13.8□□□□□ -0.2
ATPAF1-214ENST00000576409 LRP4O75096 1905 aa13.8□□□□□ -0.2
ATPAF1-214ENST00000576409 A0A0J9YXV3 536 aa13.8□□□□□ -0.2
ATPAF1-214ENST00000576409 OPRPNQ99935 248 aaPredicted RBP13.8□□□□□ -0.2
ATPAF1-214ENST00000576409 YAE1D1Q9NRH1 226 aa13.8□□□□□ -0.2
ATPAF1-214ENST00000576409 TRPT1Q86TN4 253 aaKnown RBP13.79□□□□□ -0.2
ATPAF1-214ENST00000576409 URB1-AS1Q96HZ7 61 aa13.79□□□□□ -0.2
ATPAF1-214ENST00000576409 TET2Q6N021 2002 aaPredicted RBP13.79□□□□□ -0.2
ATPAF1-214ENST00000576409 CENPVL3A0A0U1RRI6 287 aa13.79□□□□□ -0.2
ATPAF1-214ENST00000576409 C20orf78Q9BR46 151 aa13.79□□□□□ -0.2
ATPAF1-214ENST00000576409 IGHV1OR15-1A0A075B7D0 117 aa13.79□□□□□ -0.2
ATPAF1-214ENST00000576409 RPL35AP18077 110 aaKnown RBP13.79□□□□□ -0.2
ATPAF1-214ENST00000576409 SP5Q6BEB4 398 aaPredicted RBP13.79□□□□□ -0.2
ATPAF1-214ENST00000576409 G3V4G9 280 aa13.78□□□□□ -0.2
ATPAF1-214ENST00000576409 TRBV12-3P01733 135 aa13.78□□□□□ -0.2
ATPAF1-214ENST00000576409 A4D1N5 150 aa13.78□□□□□ -0.2
ATPAF1-214ENST00000576409 B4DSR2 109 aa13.78□□□□□ -0.2
ATPAF1-214ENST00000576409 NDUFA4O00483 81 aa13.78□□□□□ -0.2
ATPAF1-214ENST00000576409 TAL2Q16559 108 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms