RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 GTSF1Q8WW33 167 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 C8orf49Q96NF6 230 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 LENEPQ9Y5L5 61 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 SH2D1AO60880 128 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 CDKN1BP46527 198 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 ZNF80P51504 273 aaPredicted RBP5.66□□□□□ -1.5
CCDC40-215ENST00000576033 TCL1AP56279 114 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 NUTF2P61970 127 aaKnown RBP5.66□□□□□ -1.5
CCDC40-215ENST00000576033 SNRPEP62304 92 aaKnown RBP5.66□□□□□ -1.5
CCDC40-215ENST00000576033 RPL19P84098 196 aaKnown RBP5.66□□□□□ -1.5
CCDC40-215ENST00000576033 FAM162BQ5T6X4 162 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 WDR73Q6P4I2 378 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 C11orf68Q9H3H3 251 aaKnown RBP5.66□□□□□ -1.5
CCDC40-215ENST00000576033 TP53TG3Q9ULZ0 132 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 TRAPPC1Q9Y5R8 145 aa5.66□□□□□ -1.5
CCDC40-215ENST00000576033 IFITM10A6NMD0 228 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 KLLNB2CW77 178 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 HLA-DQA1P01909 254 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 MIFP14174 115 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 RNASE4P34096 147 aaKnown RBP5.65□□□□□ -1.5
CCDC40-215ENST00000576033 ZNF138P52744 262 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 FABP9Q0Z7S8 132 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 SMUG1Q53HV7 270 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 CASC10Q5T4H9 136 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 Q6AWC8 147 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 Q6ZTC4 211 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 OR2D3Q8NGH3 330 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 NDFIP1Q9BT67 221 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 TMEM208Q9BTX3 173 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 C1QTNF4Q9BXJ3 329 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 GOLT1BQ9Y3E0 138 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 HYDINQ4G0P3 5121 aa5.65□□□□□ -1.5
CCDC40-215ENST00000576033 C7orf71A4D174 169 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 SNURFLB1AK76 121 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 S100A6P06703 90 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 IGLC6P0CF74 106 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 CRISP2P16562 243 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 CTRLP40313 264 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 LEPP41159 167 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 RPS20P60866 119 aaKnown RBP5.64□□□□□ -1.51
CCDC40-215ENST00000576033 C12orf74Q32Q52 190 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 LINC01559Q495D7 138 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 MUC21Q5SSG8 566 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 TMEM78Q5T7P6 136 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 FAM222AQ5U5X8 452 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 DAZAP1Q96EP5 407 aaKnown RBP5.64□□□□□ -1.51
CCDC40-215ENST00000576033 LINC00477Q96M19 166 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 LINC01587Q99440 93 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 CNFNQ9BYD5 112 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 MRPL18Q9H0U6 180 aaKnown RBP5.64□□□□□ -1.51
CCDC40-215ENST00000576033 DNAH2Q9P225 4427 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 DNAH6Q9C0G6 4158 aa5.64□□□□□ -1.51
CCDC40-215ENST00000576033 FABP5P3A8MUU1 101 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 ZNF324O75467 553 aaPredicted RBP5.63□□□□□ -1.51
CCDC40-215ENST00000576033 ESDP10768 282 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 NDUFA6P56556 154 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 LINC00310P59036 64 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 HBBP68871 147 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 RRN3P1Q2M238 152 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 MRPL54Q6P161 138 aaKnown RBP5.63□□□□□ -1.51
CCDC40-215ENST00000576033 C11orf45Q8TAV5 145 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 RNASE8Q8TDE3 154 aaKnown RBP5.63□□□□□ -1.51
CCDC40-215ENST00000576033 ODF3Q96PU9 254 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 C11orf21Q9P2W6 132 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 NAGKQ9UJ70 344 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 RYR2Q92736 4967 aa5.63□□□□□ -1.51
CCDC40-215ENST00000576033 A0A1B0GW15 77 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 AMBPP02760 352 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 GPX1P07203 203 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 GZMBP10144 247 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 Q0VG73 95 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 SLAQ13239 276 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 PHLDA1Q8WV24 401 aaPredicted RBP5.62□□□□□ -1.51
CCDC40-215ENST00000576033 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 GSN-AS1Q9NRJ2 163 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 DKK2Q9UBU2 259 aa5.62□□□□□ -1.51
CCDC40-215ENST00000576033 IGKV3D-20A0A0C4DH25 116 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 A0A1B0GUT8 65 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 XKRY2A2RUG3 117 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 TMEM189A5PLL7 270 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 SPINK4O60575 86 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 S100A8P05109 93 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 HTN3P15516 51 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 TSPOP30536 169 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 ZNF493Q6ZR52 646 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 FRAS1Q86XX4 4008 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 C11orf72Q8NBR9 251 aa5.61□□□□□ -1.51
CCDC40-215ENST00000576033 SSBP4Q9BWG4 385 aaPredicted RBP5.61□□□□□ -1.51
CCDC40-215ENST00000576033 NOP10Q9NPE3 64 aaKnown RBP5.61□□□□□ -1.51
CCDC40-215ENST00000576033 IGHV4-4A0A075B6R2 117 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 CBY3A6NI87 242 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 C3orf84H3BNL1 204 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 SNAI2O43623 268 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 APCSP02743 223 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 ARMS2P0C7Q2 107 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 DEFB130BP0DP73 79 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms