RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 MUC7Q8TAX7 377 aa6.08□□□□□ -1.44
NUP88-211ENST00000575976 C9orf85Q96MD7 179 aa6.08□□□□□ -1.44
NUP88-211ENST00000575976 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
NUP88-211ENST00000575976 RNASE7Q9H1E1 156 aaKnown RBP6.08□□□□□ -1.44
NUP88-211ENST00000575976 NAT8Q9UHE5 227 aa6.08□□□□□ -1.44
NUP88-211ENST00000575976 HYDINQ4G0P3 5121 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 TMEM218A2RU14 115 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 H3BVH4 76 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 M0R2P5 195 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 GATCO43716 136 aaKnown RBP6.07□□□□□ -1.44
NUP88-211ENST00000575976 CXCL1P09341 107 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 GZMBP10144 247 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 ERVFC1-1P60608 527 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 LGALS9BQ3B8N2 356 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 ZFAND6Q6FIF0 208 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 FAM231DQ6ZW35 169 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 PHLDA1Q8WV24 401 aaPredicted RBP6.07□□□□□ -1.44
NUP88-211ENST00000575976 ISOC2Q96AB3 205 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 IL36BQ9NZH7 164 aa6.07□□□□□ -1.44
NUP88-211ENST00000575976 TRAV10A0A0B4J240 114 aa6.06□□□□□ -1.44
NUP88-211ENST00000575976 HTN3P15516 51 aa6.06□□□□□ -1.44
NUP88-211ENST00000575976 ADCYAP1P18509 176 aa6.06□□□□□ -1.44
NUP88-211ENST00000575976 RPS20P60866 119 aaKnown RBP6.06□□□□□ -1.44
NUP88-211ENST00000575976 ADIRFQ15847 76 aa6.06□□□□□ -1.44
NUP88-211ENST00000575976 CASC10Q5T4H9 136 aa6.06□□□□□ -1.44
NUP88-211ENST00000575976 RASL10AQ92737 203 aa6.06□□□□□ -1.44
NUP88-211ENST00000575976 RPP21Q9H633 154 aaKnown RBP6.06□□□□□ -1.44
NUP88-211ENST00000575976 SCRT2Q9NQ03 307 aa6.06□□□□□ -1.44
NUP88-211ENST00000575976 OSTCQ9NRP0 149 aa6.06□□□□□ -1.44
NUP88-211ENST00000575976 TRGV2A0A075B6R0 118 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 DEFB131BA0A096LNP1 70 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 XKRY2A2RUG3 117 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 F8W036 122 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 SNAI2O43623 268 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 ATP5G1P05496 136 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 IGLC6P0CF74 106 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 MED14OSP0DP75 135 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 ZNF876PQ49A33 203 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 DMRTA1Q5VZB9 504 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 CEMP1Q6PRD7 247 aaPredicted RBP6.05□□□□□ -1.44
NUP88-211ENST00000575976 POM121L12Q8N7R1 296 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 PTH2Q96A98 100 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 C18orf15Q96N68 181 aa6.05□□□□□ -1.44
NUP88-211ENST00000575976 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
NUP88-211ENST00000575976 SACSQ9NZJ4 4579 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 MUC21A0A0G2JKD1 596 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 MUC21A0A140T8X8 626 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 LCE6AA0A183 80 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 M0R381 172 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 IGHV3-53P01767 116 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 OR5AL1P0C617 328 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 FER1L6-AS1Q8NA97 138 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 OR10G8Q8NGN5 311 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 OR10AG1Q8NH19 301 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 SFRP2Q96HF1 295 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 TPPP3Q9BW30 176 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 PHLDA3Q9Y5J5 127 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 V9GYV3 84 aa6.04□□□□□ -1.44
NUP88-211ENST00000575976 TRAV4A0A0B4J268 109 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 NUPR2A6NF83 97 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 A8MWL6 223 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 F5H768 121 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 RS1O15537 224 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 HOXA5P20719 270 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 SSTP61278 116 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 PNRC1Q12796 327 aaPredicted RBP6.03□□□□□ -1.44
NUP88-211ENST00000575976 CT83Q5H943 113 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 PIK3CD-AS1Q5SR53 167 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 LYZL1Q6UWQ5 148 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 ZFP82Q8N141 532 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 C15orf54Q8N8G6 183 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 SYT8Q8NBV8 401 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 OR4C5Q8NGB2 326 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 GTSF1Q8WW33 167 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 ZNF479Q96JC4 524 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 SEC11CQ9BY50 192 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 JPT2Q9H910 190 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 MUC4Q99102 2169 aa6.03□□□□□ -1.44
NUP88-211ENST00000575976 A0A1W2PPQ1 181 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 IGLL5B9A064 214 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 F2Z2F3 143 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 FHL2Q14192 279 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 C10orf91Q5T1B1 145 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 SPANXN1Q5VSR9 72 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 CFAP126Q5VTH2 177 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 SLC7A5P1Q8MH63 180 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 TSKUQ8WUA8 353 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 NDUFAF3Q9BU61 184 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 SAMD10Q9BYL1 202 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 KLK5Q9Y337 293 aaPredicted RBP6.02□□□□□ -1.45
NUP88-211ENST00000575976 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.45
NUP88-211ENST00000575976 IGHV3-73A0A0B4J1V6 119 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 A8MWV9 139 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 NXPH4O95158 308 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 CTRLP40313 264 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
NUP88-211ENST00000575976 CACNG7P62955 275 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 RNF212Q495C1 297 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 TMEM88Q6PEY1 159 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms