RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 KHDC1LQ5JSQ8 128 aa17.65■□□□□ 0.42
NPLOC4-217ENST00000574897 ST20Q9HBF5 79 aa17.65■□□□□ 0.42
NPLOC4-217ENST00000574897 SCRT2Q9NQ03 307 aa17.65■□□□□ 0.42
NPLOC4-217ENST00000574897 WNK1Q9H4A3 2382 aa17.65■□□□□ 0.42
NPLOC4-217ENST00000574897 MRPL52Q86TS9 123 aaKnown RBP17.65■□□□□ 0.42
NPLOC4-217ENST00000574897 PLA2G2AP14555 144 aa17.64■□□□□ 0.41
NPLOC4-217ENST00000574897 SNRPD3P62318 126 aaKnown RBP17.64■□□□□ 0.41
NPLOC4-217ENST00000574897 SAMD13Q5VXD3 122 aa17.64■□□□□ 0.41
NPLOC4-217ENST00000574897 Q8N8P6 123 aa17.64■□□□□ 0.41
NPLOC4-217ENST00000574897 HSBP1L1C9JCN9 74 aa17.63■□□□□ 0.41
NPLOC4-217ENST00000574897 TCAPO15273 167 aa17.63■□□□□ 0.41
NPLOC4-217ENST00000574897 TMEM158Q8WZ71 300 aa17.63■□□□□ 0.41
NPLOC4-217ENST00000574897 SETD2Q9BYW2 2564 aaPredicted RBP17.63■□□□□ 0.41
NPLOC4-217ENST00000574897 TCTAP57738 103 aa17.62■□□□□ 0.41
NPLOC4-217ENST00000574897 LINC00469Q8N7U9 141 aa17.62■□□□□ 0.41
NPLOC4-217ENST00000574897 OR11H1Q8NG94 326 aa17.62■□□□□ 0.41
NPLOC4-217ENST00000574897 FCER1GP30273 86 aa17.62■□□□□ 0.41
NPLOC4-217ENST00000574897 FAM159AQ6UWV7 190 aa17.62■□□□□ 0.41
NPLOC4-217ENST00000574897 GOLT1BQ9Y3E0 138 aa17.62■□□□□ 0.41
NPLOC4-217ENST00000574897 SPINK13Q1W4C9 94 aa17.61■□□□□ 0.41
NPLOC4-217ENST00000574897 STPG4Q8N801 248 aa17.61■□□□□ 0.41
NPLOC4-217ENST00000574897 RPL39LQ96EH5 51 aaKnown RBP17.61■□□□□ 0.41
NPLOC4-217ENST00000574897 MGPP08493 103 aa17.61■□□□□ 0.41
NPLOC4-217ENST00000574897 HINT1P49773 126 aaPredicted RBP17.61■□□□□ 0.41
NPLOC4-217ENST00000574897 MTORP42345 2549 aa17.61■□□□□ 0.41
NPLOC4-217ENST00000574897 C7orf71A4D174 169 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 DNAJC9-AS1A6NH13 148 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 CD7P09564 240 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 Q6ZSV7 163 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 DPH3P1Q9H4G8 78 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 JPT2Q9H910 190 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 CD5LO43866 347 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 LGALS9BQ3B8N2 356 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 LGALS9CQ6DKI2 356 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 RASL10AQ92737 203 aa17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 ZMAT5Q9UDW3 170 aaKnown RBP17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 MRPS16Q9Y3D3 137 aaKnown RBP17.6■□□□□ 0.41
NPLOC4-217ENST00000574897 MED14OSP0DP75 135 aa17.59■□□□□ 0.41
NPLOC4-217ENST00000574897 ESM1Q9NQ30 184 aa17.59■□□□□ 0.41
NPLOC4-217ENST00000574897 DKK2Q9UBU2 259 aa17.59■□□□□ 0.41
NPLOC4-217ENST00000574897 MRAP2Q96G30 205 aa17.59■□□□□ 0.41
NPLOC4-217ENST00000574897 LINC01619G3V211 115 aa17.58■□□□□ 0.41
NPLOC4-217ENST00000574897 ANKRD39Q53RE8 183 aa17.58■□□□□ 0.41
NPLOC4-217ENST00000574897 UNC79Q9P2D8 2635 aa17.58■□□□□ 0.4
NPLOC4-217ENST00000574897 J3QKU1 62 aa17.58■□□□□ 0.4
NPLOC4-217ENST00000574897 C11orf44Q8N8P7 122 aa17.58■□□□□ 0.4
NPLOC4-217ENST00000574897 PRSS47A8MTI9 375 aa17.57■□□□□ 0.4
NPLOC4-217ENST00000574897 KRTAP1-1Q07627 177 aa17.57■□□□□ 0.4
NPLOC4-217ENST00000574897 KLHL30-AS1Q8NEE0 82 aa17.57■□□□□ 0.4
NPLOC4-217ENST00000574897 ZNF124Q15973 351 aa17.57■□□□□ 0.4
NPLOC4-217ENST00000574897 SLC25A34Q6PIV7 304 aa17.57■□□□□ 0.4
NPLOC4-217ENST00000574897 DPF1Q92782 380 aa17.56■□□□□ 0.4
NPLOC4-217ENST00000574897 DLX4Q92988 240 aaPredicted RBP17.56■□□□□ 0.4
NPLOC4-217ENST00000574897 KNCNA6PVL3 124 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 LAGE3Q14657 143 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 OR1N2Q8NGR9 330 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 C4orf3Q8WVX3 66 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 AP1S3Q96PC3 154 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 MDFICQ9P1T7 246 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 G0S2P27469 103 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 DEFB125Q8N687 156 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 SMIM2Q9BVW6 85 aa17.55■□□□□ 0.4
NPLOC4-217ENST00000574897 NXPH4O95158 308 aa17.54■□□□□ 0.4
NPLOC4-217ENST00000574897 SMIM17P0DL12 118 aa17.54■□□□□ 0.4
NPLOC4-217ENST00000574897 CDKN1BP46527 198 aa17.54■□□□□ 0.4
NPLOC4-217ENST00000574897 ODF3Q96PU9 254 aa17.54■□□□□ 0.4
NPLOC4-217ENST00000574897 AMTNQ6UX39 209 aa17.54■□□□□ 0.4
NPLOC4-217ENST00000574897 TMEM61Q8N0U2 210 aa17.54■□□□□ 0.4
NPLOC4-217ENST00000574897 OR9G4Q8NGQ1 327 aa17.54■□□□□ 0.4
NPLOC4-217ENST00000574897 KIF25-AS1Q9Y6Z4 181 aa17.54■□□□□ 0.4
NPLOC4-217ENST00000574897 LINC00315P59091 139 aa17.53■□□□□ 0.4
NPLOC4-217ENST00000574897 A0A087WWL8 130 aa17.53■□□□□ 0.4
NPLOC4-217ENST00000574897 DEFB131AP59861 70 aa17.53■□□□□ 0.4
NPLOC4-217ENST00000574897 SUMO2P61956 95 aaKnown RBP17.53■□□□□ 0.4
NPLOC4-217ENST00000574897 COL5A1-AS1Q5SY13 56 aa17.53■□□□□ 0.4
NPLOC4-217ENST00000574897 Q8N1Y9 231 aa17.53■□□□□ 0.4
NPLOC4-217ENST00000574897 PRSS1P07477 247 aa17.52■□□□□ 0.4
NPLOC4-217ENST00000574897 FOXI2Q6ZQN5 318 aa17.52■□□□□ 0.4
NPLOC4-217ENST00000574897 TMEM86BQ8N661 226 aa17.52■□□□□ 0.4
NPLOC4-217ENST00000574897 GCN1Q92616 2671 aaKnown RBP17.52■□□□□ 0.4
NPLOC4-217ENST00000574897 ANK3Q12955 4377 aaKnown RBP17.52■□□□□ 0.4
NPLOC4-217ENST00000574897 IGHV3-16A0A0C4DH30 117 aa17.52■□□□□ 0.39
NPLOC4-217ENST00000574897 ODF1Q14990 250 aa17.52■□□□□ 0.39
NPLOC4-217ENST00000574897 FASNP49327 2511 aaKnown RBP17.52■□□□□ 0.39
NPLOC4-217ENST00000574897 MPV17L2Q567V2 206 aa17.51■□□□□ 0.39
NPLOC4-217ENST00000574897 DEFB104AQ8WTQ1 72 aa17.51■□□□□ 0.39
NPLOC4-217ENST00000574897 FOXC2Q99958 501 aa17.51■□□□□ 0.39
NPLOC4-217ENST00000574897 A0A1W2PRX2 142 aa17.51■□□□□ 0.39
NPLOC4-217ENST00000574897 COX8AP10176 69 aa17.51■□□□□ 0.39
NPLOC4-217ENST00000574897 RBMY1A1P0DJD3 496 aaKnown RBP17.5■□□□□ 0.39
NPLOC4-217ENST00000574897 RBMY1CP0DJD4 496 aa17.5■□□□□ 0.39
NPLOC4-217ENST00000574897 ZNF25P17030 456 aaPredicted RBP17.5■□□□□ 0.39
NPLOC4-217ENST00000574897 RBMY1FQ15415 496 aaKnown RBP17.5■□□□□ 0.39
NPLOC4-217ENST00000574897 Q6ZVH6 145 aa17.5■□□□□ 0.39
NPLOC4-217ENST00000574897 NEGR1Q7Z3B1 354 aa17.5■□□□□ 0.39
NPLOC4-217ENST00000574897 YAE1D1Q9NRH1 226 aa17.5■□□□□ 0.39
NPLOC4-217ENST00000574897 DUSP14O95147 198 aaKnown RBP17.49■□□□□ 0.39
NPLOC4-217ENST00000574897 NUDT3O95989 172 aa17.49■□□□□ 0.39
NPLOC4-217ENST00000574897 IGHV1OR15-1A0A075B7D0 117 aa17.48■□□□□ 0.39
NPLOC4-217ENST00000574897 C9orf85Q96MD7 179 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms