RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 DEFB125Q8N687 156 aa12.02□□□□□ -0.48
SMPD3-212ENST00000574662 SLC50A1Q9BRV3 221 aa12.02□□□□□ -0.48
SMPD3-212ENST00000574662 U3KQE9 123 aa12.02□□□□□ -0.48
SMPD3-212ENST00000574662 A0A096LNJ9 63 aa12.02□□□□□ -0.49
SMPD3-212ENST00000574662 IGHV3-66A0A0C4DH42 116 aa12.02□□□□□ -0.49
SMPD3-212ENST00000574662 K7EMT4 169 aa12.02□□□□□ -0.49
SMPD3-212ENST00000574662 PPBPP02775 128 aa12.02□□□□□ -0.49
SMPD3-212ENST00000574662 SMAD5-AS1Q9Y6J3 95 aa12.02□□□□□ -0.49
SMPD3-212ENST00000574662 WNK1Q9H4A3 2382 aa12.01□□□□□ -0.49
SMPD3-212ENST00000574662 ADAMTSL5Q6ZMM2 481 aa12.01□□□□□ -0.49
SMPD3-212ENST00000574662 METTL26Q96S19 204 aa12.01□□□□□ -0.49
SMPD3-212ENST00000574662 CNFNQ9BYD5 112 aa12.01□□□□□ -0.49
SMPD3-212ENST00000574662 DAZ1Q9NQZ3 744 aaKnown RBP12.01□□□□□ -0.49
SMPD3-212ENST00000574662 UFC1Q9Y3C8 167 aa12.01□□□□□ -0.49
SMPD3-212ENST00000574662 VWFP04275 2813 aa12.01□□□□□ -0.49
SMPD3-212ENST00000574662 LOC389332A0A1B0GUA5 103 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 CKS2P33552 79 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 TWIST1Q15672 202 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 SHISA2Q6UWI4 295 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 OR8A1Q8NGG7 326 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 Q8TAT8 98 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 VGLL1Q99990 258 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 SELENOKQ9Y6D0 94 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 IGHV7-4-1A0A0J9YVY3 117 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 FABP5P3A8MUU1 101 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 TAX1BP3O14907 124 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 BUB3O43684 328 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 LINC01559Q495D7 138 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 OR9G4Q8NGQ1 327 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 SMPXQ9UHP9 88 aa12□□□□□ -0.49
SMPD3-212ENST00000574662 NCR2O95944 276 aa11.99□□□□□ -0.49
SMPD3-212ENST00000574662 VAMP3Q15836 100 aa11.99□□□□□ -0.49
SMPD3-212ENST00000574662 PSMG4Q5JS54 123 aa11.99□□□□□ -0.49
SMPD3-212ENST00000574662 OR4C5Q8NGB2 326 aa11.99□□□□□ -0.49
SMPD3-212ENST00000574662 MRPL53Q96EL3 112 aaKnown RBP11.99□□□□□ -0.49
SMPD3-212ENST00000574662 MCRIP2Q9BUT9 160 aaKnown RBP11.99□□□□□ -0.49
SMPD3-212ENST00000574662 MAP1LC3AQ9H492 121 aa11.99□□□□□ -0.49
SMPD3-212ENST00000574662 TP73-AS1Q9UF72 201 aa11.99□□□□□ -0.49
SMPD3-212ENST00000574662 MUC21A0A0G2JKD1 596 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 MUC21A0A140T8X8 626 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 K7EP13 123 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 OVOL1O14753 267 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
SMPD3-212ENST00000574662 ZNF80P51504 273 aaPredicted RBP11.98□□□□□ -0.49
SMPD3-212ENST00000574662 SEC11AP67812 179 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 MUC21Q5SSG8 566 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 Q6ZVH6 145 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 LINC00482Q8N8I6 264 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 RHPN1-AS1Q9BWJ2 59 aa11.98□□□□□ -0.49
SMPD3-212ENST00000574662 LINC01546A6NGU7 62 aa11.97□□□□□ -0.49
SMPD3-212ENST00000574662 NPYP01303 97 aa11.97□□□□□ -0.49
SMPD3-212ENST00000574662 ORM1P02763 201 aa11.97□□□□□ -0.49
SMPD3-212ENST00000574662 PF4P02776 101 aa11.97□□□□□ -0.49
SMPD3-212ENST00000574662 C2orf91Q6ZV80 131 aa11.97□□□□□ -0.49
SMPD3-212ENST00000574662 IFI27L1Q96BM0 104 aa11.97□□□□□ -0.49
SMPD3-212ENST00000574662 TRRAPQ9Y4A5 3859 aa11.97□□□□□ -0.49
SMPD3-212ENST00000574662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.97□□□□□ -0.49
SMPD3-212ENST00000574662 HLA-DMBP28068 263 aa11.96□□□□□ -0.49
SMPD3-212ENST00000574662 CACNG7P62955 275 aa11.96□□□□□ -0.49
SMPD3-212ENST00000574662 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.49
SMPD3-212ENST00000574662 PEMTQ9UBM1 199 aa11.96□□□□□ -0.49
SMPD3-212ENST00000574662 SIVA1O15304 175 aa11.95□□□□□ -0.5
SMPD3-212ENST00000574662 FGF6P10767 208 aa11.95□□□□□ -0.5
SMPD3-212ENST00000574662 GLMPQ8WWB7 406 aa11.95□□□□□ -0.5
SMPD3-212ENST00000574662 RNF185Q96GF1 192 aa11.95□□□□□ -0.5
SMPD3-212ENST00000574662 IGFL4Q6B9Z1 124 aa11.95□□□□□ -0.5
SMPD3-212ENST00000574662 ANKRD39Q53RE8 183 aa11.94□□□□□ -0.5
SMPD3-212ENST00000574662 TMEM97Q5BJF2 176 aa11.94□□□□□ -0.5
SMPD3-212ENST00000574662 BOD1L2Q8IYS8 172 aa11.94□□□□□ -0.5
SMPD3-212ENST00000574662 SMKR1H3BMG3 65 aa11.93□□□□□ -0.5
SMPD3-212ENST00000574662 A6NDN8 102 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 HSD52Q0P140 79 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 ERCC8Q13216 396 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 TMEM78Q5T7P6 136 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 SMIM15Q7Z3B0 74 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 CBY3A6NI87 242 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 FCER1GP30273 86 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 DEFB114Q30KQ6 69 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 ANK2Q01484 3957 aa11.92□□□□□ -0.5
SMPD3-212ENST00000574662 PRAC2D3DTV9 90 aa11.91□□□□□ -0.5
SMPD3-212ENST00000574662 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
SMPD3-212ENST00000574662 ZNF575Q86XF7 245 aa11.91□□□□□ -0.5
SMPD3-212ENST00000574662 WFDC9Q8NEX5 89 aa11.91□□□□□ -0.5
SMPD3-212ENST00000574662 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
SMPD3-212ENST00000574662 RNF182Q8N6D2 247 aa11.9□□□□□ -0.5
SMPD3-212ENST00000574662 C7orf71A4D174 169 aa11.9□□□□□ -0.51
SMPD3-212ENST00000574662 SAP30O75446 220 aa11.9□□□□□ -0.51
SMPD3-212ENST00000574662 RPL11P62913 178 aaKnown RBP11.9□□□□□ -0.51
SMPD3-212ENST00000574662 C9orf47Q6ZRZ4 202 aa11.9□□□□□ -0.51
SMPD3-212ENST00000574662 Q8N8P6 123 aa11.9□□□□□ -0.51
SMPD3-212ENST00000574662 MSRB1Q9NZV6 116 aa11.9□□□□□ -0.51
SMPD3-212ENST00000574662 TRAV8-2A0A0B4J237 113 aa11.89□□□□□ -0.51
SMPD3-212ENST00000574662 ATP5LO75964 103 aa11.89□□□□□ -0.51
SMPD3-212ENST00000574662 LEPP41159 167 aa11.89□□□□□ -0.51
SMPD3-212ENST00000574662 CD300EQ496F6 205 aaPredicted RBP11.89□□□□□ -0.51
SMPD3-212ENST00000574662 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
SMPD3-212ENST00000574662 DYNLRB2Q8TF09 96 aa11.89□□□□□ -0.51
SMPD3-212ENST00000574662 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
SMPD3-212ENST00000574662 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
SMPD3-212ENST00000574662 H3BRM9 83 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms